RNA–Protein interactions for RNA: ENST00000427926.5

CLTCL1-202, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-202ENST00000427926 ST7Q9NRC1 585 aa11.06□□□□□ -0.64
CLTCL1-202ENST00000427926 LIG4P49917 911 aa11.06□□□□□ -0.64
CLTCL1-202ENST00000427926 MCTP2Q6DN12 878 aa11.06□□□□□ -0.64
CLTCL1-202ENST00000427926 C4orf50Q6ZRC1 276 aa11.06□□□□□ -0.64
CLTCL1-202ENST00000427926 C16orf45Q96MC5 204 aaPredicted RBP11.06□□□□□ -0.64
CLTCL1-202ENST00000427926 TTC14Q96N46 770 aa11.06□□□□□ -0.64
CLTCL1-202ENST00000427926 IWS1Q96ST2 819 aa11.06□□□□□ -0.64
CLTCL1-202ENST00000427926 NOC4LQ9BVI4 516 aaKnown RBP11.06□□□□□ -0.64
CLTCL1-202ENST00000427926 HOXD10P28358 340 aa11.06□□□□□ -0.64
CLTCL1-202ENST00000427926 PPP2R5CQ13362 524 aa11.06□□□□□ -0.64
CLTCL1-202ENST00000427926 TFDP1Q14186 410 aa11.06□□□□□ -0.64
CLTCL1-202ENST00000427926 UAP1Q16222 522 aaPredicted RBP11.06□□□□□ -0.64
CLTCL1-202ENST00000427926 XKR9Q5GH70 373 aa11.06□□□□□ -0.64
CLTCL1-202ENST00000427926 CCDC129Q6ZRS4 1044 aa11.06□□□□□ -0.64
CLTCL1-202ENST00000427926 DBNDD1Q9H9R9 158 aa11.06□□□□□ -0.64
CLTCL1-202ENST00000427926 CALCOCO1Q9P1Z2 691 aa11.06□□□□□ -0.64
CLTCL1-202ENST00000427926 ANGEL1Q9UNK9 670 aaKnown RBP11.06□□□□□ -0.64
CLTCL1-202ENST00000427926 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.06□□□□□ -0.64
CLTCL1-202ENST00000427926 XPOTO43592 962 aaKnown RBP11.06□□□□□ -0.64
CLTCL1-202ENST00000427926 TSPYL6Q8N831 410 aa11.06□□□□□ -0.64
CLTCL1-202ENST00000427926 GCNAQ96QF7 691 aa11.06□□□□□ -0.64
CLTCL1-202ENST00000427926 FTOQ9C0B1 505 aaKnown RBP eCLIP11.06□□□□□ -0.64
CLTCL1-202ENST00000427926 FAM107BQ9H098 131 aa11.06□□□□□ -0.64
CLTCL1-202ENST00000427926 ATP8A2Q9NTI2 1148 aa11.06□□□□□ -0.64
CLTCL1-202ENST00000427926 PCDHB15Q9Y5E8 787 aa11.06□□□□□ -0.64
CLTCL1-202ENST00000427926 TMEM2Q9UHN6 1383 aa11.05□□□□□ -0.64
CLTCL1-202ENST00000427926 GYG1P46976 350 aa11.05□□□□□ -0.64
CLTCL1-202ENST00000427926 C1orf228Q6PIY5 440 aa11.05□□□□□ -0.64
CLTCL1-202ENST00000427926 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.05□□□□□ -0.64
CLTCL1-202ENST00000427926 H0YCG3 227 aa11.05□□□□□ -0.64
CLTCL1-202ENST00000427926 CC2D2BQ6DHV5 1058 aa11.05□□□□□ -0.64
CLTCL1-202ENST00000427926 NOP9Q86U38 636 aaKnown RBP11.05□□□□□ -0.64
CLTCL1-202ENST00000427926 PDCL2Q8N4E4 241 aa11.05□□□□□ -0.64
CLTCL1-202ENST00000427926 AOPEPQ8N6M6 819 aa11.05□□□□□ -0.64
CLTCL1-202ENST00000427926 CCDC89Q8N998 374 aa11.05□□□□□ -0.64
CLTCL1-202ENST00000427926 TRIM7Q9C029 511 aa11.05□□□□□ -0.64
CLTCL1-202ENST00000427926 PPANQ9NQ55 473 aaKnown RBP11.05□□□□□ -0.64
CLTCL1-202ENST00000427926 EDC4Q6P2E9 1401 aaKnown RBP11.05□□□□□ -0.64
CLTCL1-202ENST00000427926 CTAGE15A4D2H0 777 aa11.05□□□□□ -0.64
CLTCL1-202ENST00000427926 CTAGE8P0CG41 777 aa11.05□□□□□ -0.64
CLTCL1-202ENST00000427926 POLGP54098 1239 aaPredicted RBP11.05□□□□□ -0.64
CLTCL1-202ENST00000427926 CTAGE6Q86UF2 777 aa11.05□□□□□ -0.64
CLTCL1-202ENST00000427926 FBXO11Q86XK2 927 aa11.05□□□□□ -0.64
CLTCL1-202ENST00000427926 CTAGE4Q8IX94 777 aa11.05□□□□□ -0.64
CLTCL1-202ENST00000427926 KIF9Q9HAQ2 790 aa11.05□□□□□ -0.64
CLTCL1-202ENST00000427926 AKT3Q9Y243 479 aa11.05□□□□□ -0.64
CLTCL1-202ENST00000427926 LUC7L2Q9Y383 392 aaKnown RBP11.05□□□□□ -0.64
CLTCL1-202ENST00000427926 PLEKHG3A1L390 1219 aa11.05□□□□□ -0.64
CLTCL1-202ENST00000427926 TMEM232C9JQI7 657 aa11.05□□□□□ -0.64
CLTCL1-202ENST00000427926 RAD51AP2Q09MP3 1159 aa11.05□□□□□ -0.64
CLTCL1-202ENST00000427926 PPP2R5BQ15173 497 aa11.05□□□□□ -0.64
CLTCL1-202ENST00000427926 TTC38Q5R3I4 469 aa11.05□□□□□ -0.64
CLTCL1-202ENST00000427926 RUFY3Q7L099 469 aa11.05□□□□□ -0.64
CLTCL1-202ENST00000427926 ZNF804BA4D1E1 1349 aa11.05□□□□□ -0.64
CLTCL1-202ENST00000427926 VIMP08670 466 aaKnown RBP11.04□□□□□ -0.64
CLTCL1-202ENST00000427926 ZAP70P43403 619 aa11.04□□□□□ -0.64
CLTCL1-202ENST00000427926 CCDC6Q16204 474 aa11.04□□□□□ -0.64
CLTCL1-202ENST00000427926 GPR161Q8N6U8 529 aaKnown RBP11.04□□□□□ -0.64
CLTCL1-202ENST00000427926 PPP1R9BQ96SB3 815 aa11.04□□□□□ -0.64
CLTCL1-202ENST00000427926 MKRN1Q9UHC7 482 aaKnown RBP11.04□□□□□ -0.64
CLTCL1-202ENST00000427926 USTQ9Y2C2 406 aa11.04□□□□□ -0.64
CLTCL1-202ENST00000427926 FRMPD2Q68DX3 1309 aaPredicted RBP11.04□□□□□ -0.64
CLTCL1-202ENST00000427926 ZBTB7AO95365 584 aa11.04□□□□□ -0.64
CLTCL1-202ENST00000427926 PHKG2P15735 406 aa11.04□□□□□ -0.64
CLTCL1-202ENST00000427926 CLUL1Q15846 466 aa11.04□□□□□ -0.64
CLTCL1-202ENST00000427926 GIMAP6Q6P9H5 292 aa11.04□□□□□ -0.64
CLTCL1-202ENST00000427926 METTL23Q86XA0 190 aa11.04□□□□□ -0.64
CLTCL1-202ENST00000427926 RNF181Q9P0P0 153 aa11.04□□□□□ -0.64
CLTCL1-202ENST00000427926 HESX1Q9UBX0 185 aa11.04□□□□□ -0.64
CLTCL1-202ENST00000427926 WDR17Q8IZU2 1322 aa11.04□□□□□ -0.64
CLTCL1-202ENST00000427926 VAMP4O75379 141 aa11.04□□□□□ -0.64
CLTCL1-202ENST00000427926 IRX5P78411 483 aaPredicted RBP11.04□□□□□ -0.64
CLTCL1-202ENST00000427926 MUM1L1Q5H9M0 696 aa11.04□□□□□ -0.64
CLTCL1-202ENST00000427926 SRGAP1Q7Z6B7 1085 aa11.04□□□□□ -0.64
CLTCL1-202ENST00000427926 LRRC47Q8N1G4 583 aaKnown RBP11.04□□□□□ -0.64
CLTCL1-202ENST00000427926 GIMAP7Q8NHV1 300 aa11.04□□□□□ -0.64
CLTCL1-202ENST00000427926 LMCD1Q9NZU5 365 aa11.04□□□□□ -0.64
CLTCL1-202ENST00000427926 ELF1P32519 619 aa11.04□□□□□ -0.64
CLTCL1-202ENST00000427926 ITKQ08881 620 aa11.04□□□□□ -0.64
CLTCL1-202ENST00000427926 ANO6Q4KMQ2 910 aa11.04□□□□□ -0.64
CLTCL1-202ENST00000427926 SLFN13Q68D06 897 aa11.04□□□□□ -0.64
CLTCL1-202ENST00000427926 PSTPIP2Q9H939 334 aa11.04□□□□□ -0.64
CLTCL1-202ENST00000427926 ZNF277Q9NRM2 450 aaPredicted RBP11.04□□□□□ -0.64
CLTCL1-202ENST00000427926 TBC1D7Q9P0N9 293 aa11.04□□□□□ -0.64
CLTCL1-202ENST00000427926 PARP2Q9UGN5 583 aa11.04□□□□□ -0.64
CLTCL1-202ENST00000427926 ZBBXA8MT70 800 aa11.04□□□□□ -0.64
CLTCL1-202ENST00000427926 TLR3O15455 904 aaKnown RBP11.04□□□□□ -0.64
CLTCL1-202ENST00000427926 BBOX1O75936 387 aa11.04□□□□□ -0.64
CLTCL1-202ENST00000427926 ITIH3Q06033 890 aa11.04□□□□□ -0.64
CLTCL1-202ENST00000427926 AFAP1L2Q8N4X5 818 aa11.04□□□□□ -0.64
CLTCL1-202ENST00000427926 TEKT3Q9BXF9 490 aa11.04□□□□□ -0.64
CLTCL1-202ENST00000427926 ADCY5O95622 1261 aa11.03□□□□□ -0.64
CLTCL1-202ENST00000427926 F13A1P00488 732 aa11.03□□□□□ -0.64
CLTCL1-202ENST00000427926 PPARAQ07869 468 aa11.03□□□□□ -0.64
CLTCL1-202ENST00000427926 DACT1Q9NYF0 836 aa11.03□□□□□ -0.64
CLTCL1-202ENST00000427926 CTNND2Q9UQB3 1225 aa11.03□□□□□ -0.64
CLTCL1-202ENST00000427926 NPHP4O75161 1426 aaPredicted RBP11.03□□□□□ -0.64
CLTCL1-202ENST00000427926 GOLGA6CA6NDK9 693 aa11.03□□□□□ -0.64
CLTCL1-202ENST00000427926 GOLGA6BA6NDN3 693 aa11.03□□□□□ -0.64
CLTCL1-202ENST00000427926 SMCO2A6NFE2 343 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms