RNA–Protein interactions for RNA: ENST00000427826.1

PHF1-204, Transcript of PHD finger protein 1, humanhuman

TSL 3

Gene PHF1, Length 862 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-204ENST00000427826 ZSWIM8A7E2V4 1837 aa18.22■□□□□ 0.51
PHF1-204ENST00000427826 RNF113AO15541 343 aaKnown RBP18.22■□□□□ 0.51
PHF1-204ENST00000427826 GLRX3O76003 335 aaKnown RBP18.22■□□□□ 0.51
PHF1-204ENST00000427826 CYP2D6P10635 497 aa18.22■□□□□ 0.51
PHF1-204ENST00000427826 C12orf60Q5U649 245 aa18.22■□□□□ 0.51
PHF1-204ENST00000427826 TMEM179Q6ZVK1 233 aa18.22■□□□□ 0.51
PHF1-204ENST00000427826 NKX2-3Q8TAU0 364 aa18.22■□□□□ 0.51
PHF1-204ENST00000427826 GCC1Q96CN9 775 aa18.22■□□□□ 0.51
PHF1-204ENST00000427826 CCDC17Q96LX7 622 aa18.22■□□□□ 0.51
PHF1-204ENST00000427826 KIAA0100Q14667 2235 aaKnown RBP18.21■□□□□ 0.51
PHF1-204ENST00000427826 USP17L12C9JPN9 530 aa18.21■□□□□ 0.51
PHF1-204ENST00000427826 USP17L21D6R901 530 aa18.21■□□□□ 0.51
PHF1-204ENST00000427826 HDAC1Q13547 482 aaPredicted RBP18.21■□□□□ 0.51
PHF1-204ENST00000427826 SEPT2Q15019 361 aa18.21■□□□□ 0.51
PHF1-204ENST00000427826 ZYXQ15942 572 aaKnown RBP18.21■□□□□ 0.51
PHF1-204ENST00000427826 TSHZ3Q63HK5 1081 aa18.21■□□□□ 0.51
PHF1-204ENST00000427826 GIMAP6Q6P9H5 292 aa18.21■□□□□ 0.51
PHF1-204ENST00000427826 ACER1Q8TDN7 264 aa18.21■□□□□ 0.51
PHF1-204ENST00000427826 APPBP2Q92624 585 aa18.21■□□□□ 0.51
PHF1-204ENST00000427826 STRBPQ96SI9 672 aaKnown RBP18.21■□□□□ 0.51
PHF1-204ENST00000427826 CHGBP05060 677 aa18.2■□□□□ 0.5
PHF1-204ENST00000427826 GNAT2P19087 354 aa18.2■□□□□ 0.5
PHF1-204ENST00000427826 GUCY1A2P33402 732 aa18.2■□□□□ 0.5
PHF1-204ENST00000427826 MTFR1Q15390 333 aa18.2■□□□□ 0.5
PHF1-204ENST00000427826 PRPF38BQ5VTL8 546 aaKnown RBP18.2■□□□□ 0.5
PHF1-204ENST00000427826 CATSPERGQ6ZRH7 1159 aa18.2■□□□□ 0.5
PHF1-204ENST00000427826 CCAR1Q8IX12 1150 aaKnown RBP18.2■□□□□ 0.5
PHF1-204ENST00000427826 RBPJLQ9UBG7 517 aa18.2■□□□□ 0.5
PHF1-204ENST00000427826 ARPP21Q9UBL0 812 aaPredicted RBP18.2■□□□□ 0.5
PHF1-204ENST00000427826 DDX60LQ5H9U9 1706 aaKnown RBP18.2■□□□□ 0.5
PHF1-204ENST00000427826 NAV1Q8NEY1 1877 aa18.2■□□□□ 0.5
PHF1-204ENST00000427826 RBBP6Q7Z6E9 1792 aaKnown RBP18.19■□□□□ 0.5
PHF1-204ENST00000427826 GJB1P08034 283 aa18.19■□□□□ 0.5
PHF1-204ENST00000427826 CCL5P13501 91 aa18.19■□□□□ 0.5
PHF1-204ENST00000427826 CAPN2P17655 700 aa18.19■□□□□ 0.5
PHF1-204ENST00000427826 VCAM1P19320 739 aa18.19■□□□□ 0.5
PHF1-204ENST00000427826 MX1P20591 662 aa18.19■□□□□ 0.5
PHF1-204ENST00000427826 MAPK4P31152 587 aa18.19■□□□□ 0.5
PHF1-204ENST00000427826 CDK8P49336 464 aa18.19■□□□□ 0.5
PHF1-204ENST00000427826 EVX2Q03828 476 aa18.19■□□□□ 0.5
PHF1-204ENST00000427826 ANKRD45Q5TZF3 282 aa18.19■□□□□ 0.5
PHF1-204ENST00000427826 PDE4DIPQ5VU43 2346 aa18.19■□□□□ 0.5
PHF1-204ENST00000427826 CTR9Q6PD62 1173 aa18.19■□□□□ 0.5
PHF1-204ENST00000427826 C16orf86Q6ZW13 317 aa18.19■□□□□ 0.5
PHF1-204ENST00000427826 SLC44A5Q8NCS7 719 aa18.19■□□□□ 0.5
PHF1-204ENST00000427826 PI4K2BQ8TCG2 481 aa18.19■□□□□ 0.5
PHF1-204ENST00000427826 DYNLL2Q96FJ2 89 aa18.19■□□□□ 0.5
PHF1-204ENST00000427826 RNF208Q9H0X6 261 aa18.19■□□□□ 0.5
PHF1-204ENST00000427826 SH2D4AQ9H788 454 aa18.19■□□□□ 0.5
PHF1-204ENST00000427826 ARHGEF10LQ9HCE6 1279 aa18.19■□□□□ 0.5
PHF1-204ENST00000427826 ELNP15502 786 aa18.18■□□□□ 0.5
PHF1-204ENST00000427826 ERVK-9P63128 1117 aa18.18■□□□□ 0.5
PHF1-204ENST00000427826 ERVK-24P63145 666 aa18.18■□□□□ 0.5
PHF1-204ENST00000427826 SBK1Q52WX2 424 aa18.18■□□□□ 0.5
PHF1-204ENST00000427826 OSBP2Q969R2 916 aa18.18■□□□□ 0.5
PHF1-204ENST00000427826 TXNRD2Q9NNW7 524 aa18.18■□□□□ 0.5
PHF1-204ENST00000427826 GJD2Q9UKL4 321 aa18.18■□□□□ 0.5
PHF1-204ENST00000427826 RABGAP1Q9Y3P9 1069 aa18.18■□□□□ 0.5
PHF1-204ENST00000427826 BRCA2P51587 3418 aa18.18■□□□□ 0.5
PHF1-204ENST00000427826 CYP2D7A0A087X1C5 515 aa18.17■□□□□ 0.5
PHF1-204ENST00000427826 INHAP05111 366 aa18.17■□□□□ 0.5
PHF1-204ENST00000427826 GJA8P48165 433 aa18.17■□□□□ 0.5
PHF1-204ENST00000427826 CCNA1P78396 465 aa18.17■□□□□ 0.5
PHF1-204ENST00000427826 LBX2Q6XYB7 198 aa18.17■□□□□ 0.5
PHF1-204ENST00000427826 PAGR1Q9BTK6 254 aa18.17■□□□□ 0.5
PHF1-204ENST00000427826 RPAP3Q9H6T3 665 aaPredicted RBP18.17■□□□□ 0.5
PHF1-204ENST00000427826 MGAMO43451 1857 aa18.17■□□□□ 0.5
PHF1-204ENST00000427826 A0A1W2PRG0 241 aa18.16■□□□□ 0.5
PHF1-204ENST00000427826 GSG1L2A8MUP6 293 aa18.16■□□□□ 0.5
PHF1-204ENST00000427826 GPAA1O43292 621 aa18.16■□□□□ 0.5
PHF1-204ENST00000427826 AKR1B1P15121 316 aa18.16■□□□□ 0.5
PHF1-204ENST00000427826 ICA1Q05084 483 aa18.16■□□□□ 0.5
PHF1-204ENST00000427826 OTUD7AQ8TE49 926 aaPredicted RBP18.16■□□□□ 0.5
PHF1-204ENST00000427826 SOCS4Q8WXH5 440 aa18.16■□□□□ 0.5
PHF1-204ENST00000427826 LPAR1Q92633 364 aa18.16■□□□□ 0.5
PHF1-204ENST00000427826 NUDT12Q9BQG2 462 aa18.16■□□□□ 0.5
PHF1-204ENST00000427826 FSD1Q9BTV5 496 aa18.16■□□□□ 0.5
PHF1-204ENST00000427826 KANSL2Q9H9L4 492 aa18.16■□□□□ 0.5
PHF1-204ENST00000427826 CWC22Q9HCG8 908 aaKnown RBP18.16■□□□□ 0.5
PHF1-204ENST00000427826 HOXC10Q9NYD6 342 aa18.16■□□□□ 0.5
PHF1-204ENST00000427826 APPP05067 770 aa18.15■□□□□ 0.5
PHF1-204ENST00000427826 XRCC5P13010 732 aaKnown RBP18.15■□□□□ 0.5
PHF1-204ENST00000427826 COG2Q14746 738 aa18.15■□□□□ 0.5
PHF1-204ENST00000427826 Q3C1V9 767 aa18.15■□□□□ 0.5
PHF1-204ENST00000427826 TRMT44Q8IYL2 757 aaKnown RBP18.15■□□□□ 0.5
PHF1-204ENST00000427826 NACAP1Q9BZK3 213 aa18.15■□□□□ 0.5
PHF1-204ENST00000427826 UNC93B1Q9H1C4 597 aa18.15■□□□□ 0.5
PHF1-204ENST00000427826 RWDD1Q9H446 243 aaPredicted RBP18.15■□□□□ 0.5
PHF1-204ENST00000427826 MKNK2Q9HBH9 465 aa18.15■□□□□ 0.5
PHF1-204ENST00000427826 ZNF287Q9HBT7 754 aa18.15■□□□□ 0.5
PHF1-204ENST00000427826 TMX2Q9Y320 296 aa18.15■□□□□ 0.5
PHF1-204ENST00000427826 MYH7P12883 1935 aa18.14■□□□□ 0.49
PHF1-204ENST00000427826 PATL2C9JE40 543 aaKnown RBP18.14■□□□□ 0.49
PHF1-204ENST00000427826 HMGCRP04035 888 aa18.14■□□□□ 0.49
PHF1-204ENST00000427826 TDO2P48775 406 aa18.14■□□□□ 0.49
PHF1-204ENST00000427826 PLEKHH3Q7Z736 793 aa18.14■□□□□ 0.49
PHF1-204ENST00000427826 STAP2Q9UGK3 403 aa18.14■□□□□ 0.49
PHF1-204ENST00000427826 MINDY4BA8MYZ0 360 aa18.13■□□□□ 0.49
PHF1-204ENST00000427826 M0R2C6 588 aa18.13■□□□□ 0.49
PHF1-204ENST00000427826 PEX10O60683 326 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms