RNA–Protein interactions for RNA: ENST00000427534.6

SPG11-202, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 6,935 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-202ENST00000427534 FLOT1O75955 427 aa14.67□□□□□ -0.06
SPG11-202ENST00000427534 DCLK2Q8N568 766 aa14.67□□□□□ -0.06
SPG11-202ENST00000427534 KIFAP3Q92845 792 aa14.67□□□□□ -0.06
SPG11-202ENST00000427534 DCUN1D2Q6PH85 259 aa14.66□□□□□ -0.06
SPG11-202ENST00000427534 IQUBQ8NA54 791 aa14.66□□□□□ -0.06
SPG11-202ENST00000427534 EHBP1Q8NDI1 1231 aa14.66□□□□□ -0.06
SPG11-202ENST00000427534 BZW2Q9Y6E2 419 aaKnown RBP14.66□□□□□ -0.06
SPG11-202ENST00000427534 FMNL3Q8IVF7 1028 aa14.66□□□□□ -0.06
SPG11-202ENST00000427534 CHL1O00533 1208 aa14.66□□□□□ -0.06
SPG11-202ENST00000427534 TTC38Q5R3I4 469 aa14.66□□□□□ -0.06
SPG11-202ENST00000427534 WDR66Q8TBY9 1149 aa14.66□□□□□ -0.06
SPG11-202ENST00000427534 SKA2Q8WVK7 121 aaPredicted RBP14.66□□□□□ -0.06
SPG11-202ENST00000427534 ADGRL2O95490 1459 aa14.66□□□□□ -0.06
SPG11-202ENST00000427534 SPAG1Q07617 926 aa14.66□□□□□ -0.06
SPG11-202ENST00000427534 TBC1D8BQ0IIM8 1120 aa14.66□□□□□ -0.06
SPG11-202ENST00000427534 KLHL7Q8IXQ5 586 aa14.66□□□□□ -0.06
SPG11-202ENST00000427534 EPSTI1Q96J88 318 aa14.66□□□□□ -0.06
SPG11-202ENST00000427534 SPATA17Q96L03 361 aa14.66□□□□□ -0.06
SPG11-202ENST00000427534 RIOK1Q9BRS2 568 aaKnown RBP14.66□□□□□ -0.06
SPG11-202ENST00000427534 HELLSQ9NRZ9 838 aa14.66□□□□□ -0.06
SPG11-202ENST00000427534 PAXBP1Q9Y5B6 917 aa14.66□□□□□ -0.06
SPG11-202ENST00000427534 DISP1Q96F81 1524 aa14.66□□□□□ -0.06
SPG11-202ENST00000427534 PDE6BP35913 854 aa14.66□□□□□ -0.06
SPG11-202ENST00000427534 DIXDC1Q155Q3 683 aa14.66□□□□□ -0.06
SPG11-202ENST00000427534 DPP9Q86TI2 863 aa14.66□□□□□ -0.06
SPG11-202ENST00000427534 ZNF653Q96CK0 615 aa14.66□□□□□ -0.06
SPG11-202ENST00000427534 SLU7O95391 586 aaKnown RBP14.65□□□□□ -0.06
SPG11-202ENST00000427534 KCTD1Q719H9 257 aa14.65□□□□□ -0.06
SPG11-202ENST00000427534 LMBR1Q8WVP7 490 aa14.65□□□□□ -0.06
SPG11-202ENST00000427534 TEKT1Q969V4 418 aa14.65□□□□□ -0.06
SPG11-202ENST00000427534 SUDS3Q9H7L9 328 aaPredicted RBP14.65□□□□□ -0.06
SPG11-202ENST00000427534 LUC7L2Q9Y383 392 aaKnown RBP14.65□□□□□ -0.06
SPG11-202ENST00000427534 KRT86O43790 486 aa14.65□□□□□ -0.06
SPG11-202ENST00000427534 MIER3Q7Z3K6 550 aa14.65□□□□□ -0.06
SPG11-202ENST00000427534 PHLDB2Q86SQ0 1253 aa14.65□□□□□ -0.06
SPG11-202ENST00000427534 CSGALNACT2Q8N6G5 542 aa14.65□□□□□ -0.06
SPG11-202ENST00000427534 LRWD1Q9UFC0 647 aa14.65□□□□□ -0.06
SPG11-202ENST00000427534 DLATP10515 647 aaKnown RBP14.65□□□□□ -0.06
SPG11-202ENST00000427534 NAA25Q14CX7 972 aa14.65□□□□□ -0.06
SPG11-202ENST00000427534 DNM3Q9UQ16 869 aa14.65□□□□□ -0.06
SPG11-202ENST00000427534 ARID4AP29374 1257 aaPredicted RBP14.65□□□□□ -0.06
SPG11-202ENST00000427534 BTDP43251 543 aa14.65□□□□□ -0.06
SPG11-202ENST00000427534 PARP10Q53GL7 1025 aa14.65□□□□□ -0.06
SPG11-202ENST00000427534 C17orf53Q8N3J3 647 aaPredicted RBP14.65□□□□□ -0.06
SPG11-202ENST00000427534 TRIM7Q9C029 511 aa14.65□□□□□ -0.06
SPG11-202ENST00000427534 USP17L12C9JPN9 530 aa14.65□□□□□ -0.06
SPG11-202ENST00000427534 USP17L21D6R901 530 aa14.65□□□□□ -0.06
SPG11-202ENST00000427534 RPL13P26373 211 aaKnown RBP14.65□□□□□ -0.06
SPG11-202ENST00000427534 NLRX1Q86UT6 975 aa14.65□□□□□ -0.06
SPG11-202ENST00000427534 SPC25Q9HBM1 224 aa14.65□□□□□ -0.06
SPG11-202ENST00000427534 HOXB7P09629 217 aa14.64□□□□□ -0.07
SPG11-202ENST00000427534 CUL4BQ13620 913 aa14.64□□□□□ -0.07
SPG11-202ENST00000427534 LRRC24Q50LG9 513 aa14.64□□□□□ -0.07
SPG11-202ENST00000427534 PRIMPOLQ96LW4 560 aa14.64□□□□□ -0.07
SPG11-202ENST00000427534 SMCO2A6NFE2 343 aa14.64□□□□□ -0.07
SPG11-202ENST00000427534 CTSWP56202 376 aa14.64□□□□□ -0.07
SPG11-202ENST00000427534 CCDC77Q9BR77 488 aa14.64□□□□□ -0.07
SPG11-202ENST00000427534 CARD10Q9BWT7 1032 aa14.64□□□□□ -0.07
SPG11-202ENST00000427534 ABCB4P21439 1286 aa14.64□□□□□ -0.07
SPG11-202ENST00000427534 RXRBP28702 533 aa14.64□□□□□ -0.07
SPG11-202ENST00000427534 NLRC4Q9NPP4 1024 aa14.64□□□□□ -0.07
SPG11-202ENST00000427534 GAS7O60861 476 aa14.64□□□□□ -0.07
SPG11-202ENST00000427534 CABP7Q86V35 215 aa14.64□□□□□ -0.07
SPG11-202ENST00000427534 DIS3L2Q8IYB7 885 aaKnown RBP14.64□□□□□ -0.07
SPG11-202ENST00000427534 MGARPQ8TDB4 240 aa14.64□□□□□ -0.07
SPG11-202ENST00000427534 NOLC1Q14978 699 aaKnown RBP eCLIP14.64□□□□□ -0.07
SPG11-202ENST00000427534 PTPN21Q16825 1174 aa14.64□□□□□ -0.07
SPG11-202ENST00000427534 CCDC14Q49A88 953 aa14.64□□□□□ -0.07
SPG11-202ENST00000427534 SUPT20HQ8NEM7 779 aa14.64□□□□□ -0.07
SPG11-202ENST00000427534 GSDMBQ8TAX9 411 aa14.64□□□□□ -0.07
SPG11-202ENST00000427534 DEPTORQ8TB45 409 aa14.64□□□□□ -0.07
SPG11-202ENST00000427534 LPIN2Q92539 896 aa14.64□□□□□ -0.07
SPG11-202ENST00000427534 NBPF3Q9H094 633 aa14.64□□□□□ -0.07
SPG11-202ENST00000427534 DEXIO95424 95 aa14.64□□□□□ -0.07
SPG11-202ENST00000427534 KRT83P78385 493 aa14.64□□□□□ -0.07
SPG11-202ENST00000427534 PNOCQ13519 176 aa14.64□□□□□ -0.07
SPG11-202ENST00000427534 CTTNBP2NLQ9P2B4 639 aa14.64□□□□□ -0.07
SPG11-202ENST00000427534 SLC16A2P36021 539 aa14.63□□□□□ -0.07
SPG11-202ENST00000427534 SMC6Q96SB8 1091 aa14.63□□□□□ -0.07
SPG11-202ENST00000427534 ASAP1Q9ULH1 1129 aa14.63□□□□□ -0.07
SPG11-202ENST00000427534 CYP4A11Q02928 519 aa14.63□□□□□ -0.07
SPG11-202ENST00000427534 CERKLQ49MI3 558 aaPredicted RBP14.63□□□□□ -0.07
SPG11-202ENST00000427534 BRAPQ7Z569 592 aa14.63□□□□□ -0.07
SPG11-202ENST00000427534 GDAP1L1Q96MZ0 367 aa14.63□□□□□ -0.07
SPG11-202ENST00000427534 ZMYM4Q5VZL5 1548 aa14.63□□□□□ -0.07
SPG11-202ENST00000427534 VIMP08670 466 aaKnown RBP14.63□□□□□ -0.07
SPG11-202ENST00000427534 ITIH3Q06033 890 aa14.63□□□□□ -0.07
SPG11-202ENST00000427534 XKR9Q5GH70 373 aa14.63□□□□□ -0.07
SPG11-202ENST00000427534 RYBPQ8N488 228 aaPredicted RBP14.63□□□□□ -0.07
SPG11-202ENST00000427534 BNIP3LO60238 219 aa14.63□□□□□ -0.07
SPG11-202ENST00000427534 MARK3P27448 753 aa14.63□□□□□ -0.07
SPG11-202ENST00000427534 PRPHP41219 470 aa14.63□□□□□ -0.07
SPG11-202ENST00000427534 OSTNP61366 133 aa14.63□□□□□ -0.07
SPG11-202ENST00000427534 PPP2R5AQ15172 486 aa14.63□□□□□ -0.07
SPG11-202ENST00000427534 IGSF22Q8N9C0 903 aa14.63□□□□□ -0.07
SPG11-202ENST00000427534 AKT3Q9Y243 479 aa14.63□□□□□ -0.07
SPG11-202ENST00000427534 PRAMEF22A3QJZ6 481 aa14.62□□□□□ -0.07
SPG11-202ENST00000427534 PPARAQ07869 468 aa14.62□□□□□ -0.07
SPG11-202ENST00000427534 KAZNQ674X7 775 aa14.62□□□□□ -0.07
SPG11-202ENST00000427534 CDAN1Q8IWY9 1227 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms