RNA–Protein interactions for RNA: ENST00000427461.1

LSG1-202, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 5

Gene LSG1, Length 755 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-202ENST00000427461 ERC2O15083 957 aa11.51□□□□□ -0.57
LSG1-202ENST00000427461 HOXC6P09630 235 aa11.51□□□□□ -0.57
LSG1-202ENST00000427461 ACRP10323 421 aa11.51□□□□□ -0.57
LSG1-202ENST00000427461 BTDP43251 543 aa11.51□□□□□ -0.57
LSG1-202ENST00000427461 FAAP100Q0VG06 881 aa11.51□□□□□ -0.57
LSG1-202ENST00000427461 PUM3Q15397 648 aaKnown RBP11.51□□□□□ -0.57
LSG1-202ENST00000427461 RASIP1Q5U651 963 aa11.51□□□□□ -0.57
LSG1-202ENST00000427461 SLC44A5Q8NCS7 719 aa11.51□□□□□ -0.57
LSG1-202ENST00000427461 WDR18Q9BV38 432 aa11.51□□□□□ -0.57
LSG1-202ENST00000427461 SMCHD1A6NHR9 2005 aa11.5□□□□□ -0.57
LSG1-202ENST00000427461 CACNA1AO00555 2505 aa11.5□□□□□ -0.57
LSG1-202ENST00000427461 PI4K2BG5E9Z4 385 aa11.5□□□□□ -0.57
LSG1-202ENST00000427461 SEPT4O43236 478 aa11.5□□□□□ -0.57
LSG1-202ENST00000427461 GLRX3O76003 335 aaKnown RBP11.5□□□□□ -0.57
LSG1-202ENST00000427461 GRB14Q14449 540 aa11.5□□□□□ -0.57
LSG1-202ENST00000427461 SLC28A3Q9HAS3 691 aa11.5□□□□□ -0.57
LSG1-202ENST00000427461 MSRAQ9UJ68 235 aa11.5□□□□□ -0.57
LSG1-202ENST00000427461 PHF24Q9UPV7 400 aa11.5□□□□□ -0.57
LSG1-202ENST00000427461 KIF16BQ96L93 1317 aa11.5□□□□□ -0.57
LSG1-202ENST00000427461 PRR33A8MZF0 331 aa11.49□□□□□ -0.57
LSG1-202ENST00000427461 RFXAPO00287 272 aa11.49□□□□□ -0.57
LSG1-202ENST00000427461 TIMP1P01033 207 aa11.49□□□□□ -0.57
LSG1-202ENST00000427461 NBPF7P0C2Y1 421 aaPredicted RBP11.49□□□□□ -0.57
LSG1-202ENST00000427461 RHBDL3P58872 404 aa11.49□□□□□ -0.57
LSG1-202ENST00000427461 ZNF365Q70YC5 407 aa11.49□□□□□ -0.57
LSG1-202ENST00000427461 FBXL18Q96ME1 805 aa11.49□□□□□ -0.57
LSG1-202ENST00000427461 UIMC1Q96RL1 719 aa11.49□□□□□ -0.57
LSG1-202ENST00000427461 BICC1Q9H694 974 aaKnown RBP11.49□□□□□ -0.57
LSG1-202ENST00000427461 EMILIN3Q9NT22 766 aa11.49□□□□□ -0.57
LSG1-202ENST00000427461 PRRC2BQ5JSZ5 2229 aaKnown RBP11.49□□□□□ -0.57
LSG1-202ENST00000427461 SIPA1L1O43166 1804 aa11.49□□□□□ -0.57
LSG1-202ENST00000427461 A0A1W2PQ45 241 aaPredicted RBP11.48□□□□□ -0.57
LSG1-202ENST00000427461 A0A1W2PQY0 241 aa11.48□□□□□ -0.57
LSG1-202ENST00000427461 USP17L10C9JJH3 530 aa11.48□□□□□ -0.57
LSG1-202ENST00000427461 PGK1P00558 417 aa11.48□□□□□ -0.57
LSG1-202ENST00000427461 SLC5A1P13866 664 aa11.48□□□□□ -0.57
LSG1-202ENST00000427461 MYOGP15173 224 aa11.48□□□□□ -0.57
LSG1-202ENST00000427461 CSF2RAP15509 400 aa11.48□□□□□ -0.57
LSG1-202ENST00000427461 RABGGTBP53611 331 aa11.48□□□□□ -0.57
LSG1-202ENST00000427461 CCNA1P78396 465 aa11.48□□□□□ -0.57
LSG1-202ENST00000427461 RAB30Q15771 203 aa11.48□□□□□ -0.57
LSG1-202ENST00000427461 KRT40Q6A162 431 aa11.48□□□□□ -0.57
LSG1-202ENST00000427461 MFSD5Q6N075 450 aa11.48□□□□□ -0.57
LSG1-202ENST00000427461 DPP9Q86TI2 863 aa11.48□□□□□ -0.57
LSG1-202ENST00000427461 HERVK_113Q902F9 699 aa11.48□□□□□ -0.57
LSG1-202ENST00000427461 PHOX2BQ99453 314 aa11.48□□□□□ -0.57
LSG1-202ENST00000427461 BTBD7Q9P203 1132 aa11.48□□□□□ -0.57
LSG1-202ENST00000427461 RABGAP1Q9Y3P9 1069 aa11.48□□□□□ -0.57
LSG1-202ENST00000427461 IVNS1ABPQ9Y6Y0 642 aa11.48□□□□□ -0.57
LSG1-202ENST00000427461 SALL1Q9NSC2 1324 aa11.48□□□□□ -0.57
LSG1-202ENST00000427461 CACNA1FO60840 1977 aa11.48□□□□□ -0.57
LSG1-202ENST00000427461 TRANK1O15050 2925 aa11.48□□□□□ -0.57
LSG1-202ENST00000427461 C19orf81C9J6K1 198 aa11.47□□□□□ -0.57
LSG1-202ENST00000427461 PHKA1P46020 1223 aa11.47□□□□□ -0.57
LSG1-202ENST00000427461 DZIP1Q86YF9 867 aaKnown RBP11.47□□□□□ -0.57
LSG1-202ENST00000427461 ANKRD44Q8N8A2 993 aa11.47□□□□□ -0.57
LSG1-202ENST00000427461 GTF3C2Q8WUA4 911 aaPredicted RBP11.47□□□□□ -0.57
LSG1-202ENST00000427461 LPIN2Q92539 896 aa11.47□□□□□ -0.57
LSG1-202ENST00000427461 TBX21Q9UL17 535 aa11.47□□□□□ -0.57
LSG1-202ENST00000427461 MROH7-TTC4A0A0A0MT08 1334 aa11.46□□□□□ -0.57
LSG1-202ENST00000427461 COBLO75128 1261 aa11.46□□□□□ -0.57
LSG1-202ENST00000427461 GDF11O95390 407 aa11.46□□□□□ -0.57
LSG1-202ENST00000427461 ADORA2AP29274 412 aa11.46□□□□□ -0.57
LSG1-202ENST00000427461 PPIGQ13427 754 aaKnown RBP eCLIP11.46□□□□□ -0.57
LSG1-202ENST00000427461 RALBP1Q15311 655 aa11.46□□□□□ -0.57
LSG1-202ENST00000427461 ZYXQ15942 572 aaKnown RBP11.46□□□□□ -0.57
LSG1-202ENST00000427461 RABL6Q3YEC7 729 aaPredicted RBP11.46□□□□□ -0.57
LSG1-202ENST00000427461 OLFML2BQ68BL8 750 aa11.46□□□□□ -0.57
LSG1-202ENST00000427461 SLC4A10Q6U841 1118 aa11.46□□□□□ -0.57
LSG1-202ENST00000427461 ANKRD33Q7Z3H0 272 aa11.46□□□□□ -0.57
LSG1-202ENST00000427461 ANKS1AQ92625 1134 aa11.46□□□□□ -0.57
LSG1-202ENST00000427461 FAM163AQ96GL9 167 aaPredicted RBP11.46□□□□□ -0.57
LSG1-202ENST00000427461 XPNPEP3Q9NQH7 507 aa11.46□□□□□ -0.57
LSG1-202ENST00000427461 ABCF2Q9UG63 623 aa11.46□□□□□ -0.57
LSG1-202ENST00000427461 MTCH2Q9Y6C9 303 aa11.46□□□□□ -0.57
LSG1-202ENST00000427461 USP34Q70CQ2 3546 aa11.46□□□□□ -0.58
LSG1-202ENST00000427461 GPR75-ASB3A0A0A6YYF3 556 aa11.45□□□□□ -0.58
LSG1-202ENST00000427461 DCDC2CA8MYV0 355 aa11.45□□□□□ -0.58
LSG1-202ENST00000427461 ASNSP08243 561 aa11.45□□□□□ -0.58
LSG1-202ENST00000427461 PPP2R2DQ66LE6 453 aa11.45□□□□□ -0.58
LSG1-202ENST00000427461 ZNF384Q8TF68 577 aa11.45□□□□□ -0.58
LSG1-202ENST00000427461 LENG1Q96BZ8 264 aaPredicted RBP11.45□□□□□ -0.58
LSG1-202ENST00000427461 TOX2Q96NM4 488 aa11.45□□□□□ -0.58
LSG1-202ENST00000427461 PPP1R12CQ9BZL4 782 aa11.45□□□□□ -0.58
LSG1-202ENST00000427461 DNAJC18Q9H819 358 aa11.45□□□□□ -0.58
LSG1-202ENST00000427461 CERS4Q9HA82 394 aa11.45□□□□□ -0.58
LSG1-202ENST00000427461 DENND2AQ9ULE3 1009 aa11.45□□□□□ -0.58
LSG1-202ENST00000427461 CFAP54Q96N23 3096 aa11.45□□□□□ -0.58
LSG1-202ENST00000427461 APBB1O00213 710 aa11.44□□□□□ -0.58
LSG1-202ENST00000427461 ALDH1L1O75891 902 aa11.44□□□□□ -0.58
LSG1-202ENST00000427461 USP17L2Q6R6M4 530 aa11.44□□□□□ -0.58
LSG1-202ENST00000427461 HERC5Q9UII4 1024 aaKnown RBP11.44□□□□□ -0.58
LSG1-202ENST00000427461 COG5Q9UP83 839 aa11.44□□□□□ -0.58
LSG1-202ENST00000427461 ZNF236Q9UL36 1845 aa11.44□□□□□ -0.58
LSG1-202ENST00000427461 EPOPA6NHQ4 379 aa11.43□□□□□ -0.58
LSG1-202ENST00000427461 USP17L15C9J2P7 530 aa11.43□□□□□ -0.58
LSG1-202ENST00000427461 USP17L13C9JLJ4 530 aa11.43□□□□□ -0.58
LSG1-202ENST00000427461 USP17L11C9JVI0 530 aa11.43□□□□□ -0.58
LSG1-202ENST00000427461 USP17L18D6R9N7 530 aa11.43□□□□□ -0.58
LSG1-202ENST00000427461 USP17L22D6RA61 530 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms