RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 PALM2Q8IXS6 379 aa15.92■□□□□ 0.14
PTPN13-203ENST00000427191 LRRC2Q9BYS8 371 aa15.92■□□□□ 0.14
PTPN13-203ENST00000427191 POSTNQ15063 836 aa15.92■□□□□ 0.14
PTPN13-203ENST00000427191 ZC3H12CQ9C0D7 883 aaKnown RBP15.92■□□□□ 0.14
PTPN13-203ENST00000427191 BIRC2Q13490 618 aa15.91■□□□□ 0.14
PTPN13-203ENST00000427191 SND1Q7KZF4 910 aaKnown RBP eCLIP15.91■□□□□ 0.14
PTPN13-203ENST00000427191 DACT3Q96B18 629 aaPredicted RBP15.91■□□□□ 0.14
PTPN13-203ENST00000427191 SPATS2LQ9NUQ6 558 aaKnown RBP15.91■□□□□ 0.14
PTPN13-203ENST00000427191 LRGUKQ96M69 825 aa15.91■□□□□ 0.14
PTPN13-203ENST00000427191 DUOX2Q9NRD8 1548 aa15.91■□□□□ 0.14
PTPN13-203ENST00000427191 ATP6V1E1P36543 226 aa15.91■□□□□ 0.14
PTPN13-203ENST00000427191 SIRT1Q96EB6 747 aa15.91■□□□□ 0.14
PTPN13-203ENST00000427191 TRIM56Q9BRZ2 755 aaKnown RBP15.91■□□□□ 0.14
PTPN13-203ENST00000427191 APOBRQ0VD83 1088 aa15.91■□□□□ 0.14
PTPN13-203ENST00000427191 ZSCAN26Q16670 478 aa15.91■□□□□ 0.14
PTPN13-203ENST00000427191 CDKL2Q92772 493 aa15.91■□□□□ 0.14
PTPN13-203ENST00000427191 BAIAP2L1Q9UHR4 511 aa15.91■□□□□ 0.14
PTPN13-203ENST00000427191 MSH6P52701 1360 aa15.91■□□□□ 0.14
PTPN13-203ENST00000427191 JDP2Q8WYK2 163 aa15.91■□□□□ 0.14
PTPN13-203ENST00000427191 ZMAT2Q96NC0 199 aaKnown RBP15.91■□□□□ 0.14
PTPN13-203ENST00000427191 PICK1Q9NRD5 415 aa15.91■□□□□ 0.14
PTPN13-203ENST00000427191 EFCAB8A8MWE9 144 aa15.9■□□□□ 0.14
PTPN13-203ENST00000427191 LRCH2Q5VUJ6 765 aa15.9■□□□□ 0.14
PTPN13-203ENST00000427191 NOP56O00567 594 aaKnown RBP15.9■□□□□ 0.14
PTPN13-203ENST00000427191 ELF2Q15723 593 aa15.9■□□□□ 0.14
PTPN13-203ENST00000427191 USHBP1Q8N6Y0 703 aa15.9■□□□□ 0.14
PTPN13-203ENST00000427191 VPS37BQ9H9H4 285 aa15.9■□□□□ 0.14
PTPN13-203ENST00000427191 M0QZ92 97 aa15.9■□□□□ 0.14
PTPN13-203ENST00000427191 IGHDP01880 384 aa15.9■□□□□ 0.14
PTPN13-203ENST00000427191 LETM2Q2VYF4 491 aa15.9■□□□□ 0.14
PTPN13-203ENST00000427191 SUN1O94901 812 aa15.9■□□□□ 0.14
PTPN13-203ENST00000427191 MAGEA1P43355 309 aa15.9■□□□□ 0.14
PTPN13-203ENST00000427191 HADHQ16836 314 aaKnown RBP15.9■□□□□ 0.14
PTPN13-203ENST00000427191 MAGEF1Q9HAY2 307 aa15.9■□□□□ 0.14
PTPN13-203ENST00000427191 ABCD1P33897 745 aa15.89■□□□□ 0.13
PTPN13-203ENST00000427191 HELBQ8NG08 1087 aaPredicted RBP15.89■□□□□ 0.13
PTPN13-203ENST00000427191 XAGE3Q8WTP9 111 aa15.89■□□□□ 0.13
PTPN13-203ENST00000427191 FAM81BQ96LP2 452 aa15.89■□□□□ 0.13
PTPN13-203ENST00000427191 BZW2Q9Y6E2 419 aaKnown RBP15.89■□□□□ 0.13
PTPN13-203ENST00000427191 CALCRLQ16602 461 aa15.89■□□□□ 0.13
PTPN13-203ENST00000427191 CCDC13Q8IYE1 715 aa15.89■□□□□ 0.13
PTPN13-203ENST00000427191 RAB20Q9NX57 234 aa15.89■□□□□ 0.13
PTPN13-203ENST00000427191 MAP3K5Q99683 1374 aa15.89■□□□□ 0.13
PTPN13-203ENST00000427191 PDZD8Q8NEN9 1154 aa15.89■□□□□ 0.13
PTPN13-203ENST00000427191 CTTNBP2Q8WZ74 1663 aa15.89■□□□□ 0.13
PTPN13-203ENST00000427191 POLR2DO15514 142 aaKnown RBP15.89■□□□□ 0.13
PTPN13-203ENST00000427191 ATP8B1O43520 1251 aa15.89■□□□□ 0.13
PTPN13-203ENST00000427191 POLR2BP30876 1174 aaKnown RBP15.89■□□□□ 0.13
PTPN13-203ENST00000427191 POLR3AO14802 1390 aaPredicted RBP15.89■□□□□ 0.13
PTPN13-203ENST00000427191 EIF3DO15371 548 aaKnown RBP eCLIP15.89■□□□□ 0.13
PTPN13-203ENST00000427191 PPP2R5DQ14738 602 aa15.89■□□□□ 0.13
PTPN13-203ENST00000427191 TSHZ3Q63HK5 1081 aa15.89■□□□□ 0.13
PTPN13-203ENST00000427191 KRT28Q7Z3Y7 464 aa15.89■□□□□ 0.13
PTPN13-203ENST00000427191 XAB2Q9HCS7 855 aaKnown RBP15.89■□□□□ 0.13
PTPN13-203ENST00000427191 KPNA2P52292 529 aaKnown RBP15.89■□□□□ 0.13
PTPN13-203ENST00000427191 OTUD6AQ7L8S5 288 aa15.89■□□□□ 0.13
PTPN13-203ENST00000427191 MRPL50Q8N5N7 158 aaKnown RBP15.89■□□□□ 0.13
PTPN13-203ENST00000427191 MEIS3Q99687 375 aa15.89■□□□□ 0.13
PTPN13-203ENST00000427191 SPECC1L-ADORA2AF8WAN1 911 aa15.89■□□□□ 0.13
PTPN13-203ENST00000427191 ZNF202O95125 648 aa15.89■□□□□ 0.13
PTPN13-203ENST00000427191 XRCC5P13010 732 aaKnown RBP15.89■□□□□ 0.13
PTPN13-203ENST00000427191 ATF7P17544 494 aaPredicted RBP15.89■□□□□ 0.13
PTPN13-203ENST00000427191 TCP1P17987 556 aaKnown RBP15.89■□□□□ 0.13
PTPN13-203ENST00000427191 CAPS2Q9BXY5 557 aa15.89■□□□□ 0.13
PTPN13-203ENST00000427191 CCDC68Q9H2F9 335 aa15.89■□□□□ 0.13
PTPN13-203ENST00000427191 GPHNQ9NQX3 736 aaPredicted RBP15.89■□□□□ 0.13
PTPN13-203ENST00000427191 HYOU1Q9Y4L1 999 aa15.89■□□□□ 0.13
PTPN13-203ENST00000427191 PALM3A6NDB9 673 aaPredicted RBP15.88■□□□□ 0.13
PTPN13-203ENST00000427191 TTC38Q5R3I4 469 aa15.88■□□□□ 0.13
PTPN13-203ENST00000427191 AZI2Q9H6S1 392 aa15.88■□□□□ 0.13
PTPN13-203ENST00000427191 U2AF2P26368 475 aaKnown RBP eCLIP15.88■□□□□ 0.13
PTPN13-203ENST00000427191 ZMYM3Q14202 1370 aa15.88■□□□□ 0.13
PTPN13-203ENST00000427191 SSH2Q76I76 1423 aa15.88■□□□□ 0.13
PTPN13-203ENST00000427191 CCHCR1Q8TD31 782 aa15.88■□□□□ 0.13
PTPN13-203ENST00000427191 PASKQ96RG2 1323 aa15.88■□□□□ 0.13
PTPN13-203ENST00000427191 MRPL44Q9H9J2 332 aaKnown RBP15.88■□□□□ 0.13
PTPN13-203ENST00000427191 RINT1Q6NUQ1 792 aa15.88■□□□□ 0.13
PTPN13-203ENST00000427191 SRRM1Q8IYB3 904 aaKnown RBP15.88■□□□□ 0.13
PTPN13-203ENST00000427191 VPS16Q9H269 839 aa15.88■□□□□ 0.13
PTPN13-203ENST00000427191 WDR7Q9Y4E6 1490 aa15.88■□□□□ 0.13
PTPN13-203ENST00000427191 CHMLP26374 656 aa15.88■□□□□ 0.13
PTPN13-203ENST00000427191 STAT1P42224 750 aa15.88■□□□□ 0.13
PTPN13-203ENST00000427191 ADCY7P51828 1080 aa15.88■□□□□ 0.13
PTPN13-203ENST00000427191 NBPF14Q5TI25 921 aa15.88■□□□□ 0.13
PTPN13-203ENST00000427191 JADE1Q6IE81 842 aa15.88■□□□□ 0.13
PTPN13-203ENST00000427191 MYO1AQ9UBC5 1043 aa15.88■□□□□ 0.13
PTPN13-203ENST00000427191 FLT4P35916 1363 aa15.88■□□□□ 0.13
PTPN13-203ENST00000427191 TTI1O43156 1089 aa15.88■□□□□ 0.13
PTPN13-203ENST00000427191 TRIM50Q86XT4 487 aa15.88■□□□□ 0.13
PTPN13-203ENST00000427191 ZCRB1Q8TBF4 217 aaKnown RBP15.88■□□□□ 0.13
PTPN13-203ENST00000427191 KRT81Q14533 505 aa15.88■□□□□ 0.13
PTPN13-203ENST00000427191 POLD1P28340 1107 aa15.87■□□□□ 0.13
PTPN13-203ENST00000427191 LMBR1LQ6UX01 489 aa15.87■□□□□ 0.13
PTPN13-203ENST00000427191 RIPOR2Q9Y4F9 1068 aa15.87■□□□□ 0.13
PTPN13-203ENST00000427191 CAPN7Q9Y6W3 813 aa15.87■□□□□ 0.13
PTPN13-203ENST00000427191 SOS2Q07890 1332 aaPredicted RBP15.87■□□□□ 0.13
PTPN13-203ENST00000427191 TRPM2O94759 1503 aa15.87■□□□□ 0.13
PTPN13-203ENST00000427191 FOXO3O43524 673 aa15.87■□□□□ 0.13
PTPN13-203ENST00000427191 STAM2O75886 525 aa15.87■□□□□ 0.13
PTPN13-203ENST00000427191 SRGAP2BP0DMP2 458 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms