RNA–Protein interactions for RNA: ENST00000427123.5

SNX17-202, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 2,007 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-202ENST00000427123 GTF2F1P35269 517 aaKnown RBP eCLIP22.06■■□□□ 1.12
SNX17-202ENST00000427123 MDM2Q00987 491 aaPredicted RBP22.06■■□□□ 1.12
SNX17-202ENST00000427123 MYL5Q02045 173 aa22.06■■□□□ 1.12
SNX17-202ENST00000427123 SPECC1Q5M775 1068 aa22.06■■□□□ 1.12
SNX17-202ENST00000427123 ISM2Q6H9L7 571 aa22.06■■□□□ 1.12
SNX17-202ENST00000427123 IFNKQ9P0W0 207 aa22.06■■□□□ 1.12
SNX17-202ENST00000427123 MYO1BO43795 1136 aa22.06■■□□□ 1.12
SNX17-202ENST00000427123 DHX8Q14562 1220 aaKnown RBP22.06■■□□□ 1.12
SNX17-202ENST00000427123 MEX3CQ5U5Q3 659 aaKnown RBP22.06■■□□□ 1.12
SNX17-202ENST00000427123 PRR5LQ6MZQ0 368 aa22.06■■□□□ 1.12
SNX17-202ENST00000427123 MKRN1Q9UHC7 482 aaKnown RBP22.06■■□□□ 1.12
SNX17-202ENST00000427123 PCDHA5Q9Y5H7 936 aa22.06■■□□□ 1.12
SNX17-202ENST00000427123 hCG_1642624A0A1W2PR95 340 aa22.05■■□□□ 1.12
SNX17-202ENST00000427123 ATP2B1P20020 1258 aa22.05■■□□□ 1.12
SNX17-202ENST00000427123 USP5P45974 858 aa22.05■■□□□ 1.12
SNX17-202ENST00000427123 ARID5BQ14865 1188 aa22.05■■□□□ 1.12
SNX17-202ENST00000427123 POSTNQ15063 836 aa22.05■■□□□ 1.12
SNX17-202ENST00000427123 C12orf60Q5U649 245 aa22.05■■□□□ 1.12
SNX17-202ENST00000427123 SRBD1Q8N5C6 995 aaKnown RBP22.05■■□□□ 1.12
SNX17-202ENST00000427123 RPGRQ92834 1020 aaKnown RBP22.05■■□□□ 1.12
SNX17-202ENST00000427123 BCL11BQ9C0K0 894 aaPredicted RBP22.05■■□□□ 1.12
SNX17-202ENST00000427123 POLR2DO15514 142 aaKnown RBP22.04■■□□□ 1.12
SNX17-202ENST00000427123 ONECUT3O60422 494 aaPredicted RBP22.04■■□□□ 1.12
SNX17-202ENST00000427123 USP17L8P0C7I0 530 aa22.04■■□□□ 1.12
SNX17-202ENST00000427123 KANK3Q6NY19 840 aa22.04■■□□□ 1.12
SNX17-202ENST00000427123 CERKQ8TCT0 537 aa22.04■■□□□ 1.12
SNX17-202ENST00000427123 TNFRSF25Q93038 417 aa22.04■■□□□ 1.12
SNX17-202ENST00000427123 FAM205CA6NFA0 338 aa22.04■■□□□ 1.12
SNX17-202ENST00000427123 BAG3O95817 575 aa22.04■■□□□ 1.12
SNX17-202ENST00000427123 KIF5BP33176 963 aa22.04■■□□□ 1.12
SNX17-202ENST00000427123 CCZ1BP86790 482 aa22.04■■□□□ 1.12
SNX17-202ENST00000427123 CCZ1P86791 482 aaPredicted RBP22.04■■□□□ 1.12
SNX17-202ENST00000427123 FOXP4Q8IVH2 680 aaPredicted RBP22.04■■□□□ 1.12
SNX17-202ENST00000427123 AMOTL1Q8IY63 956 aa22.04■■□□□ 1.12
SNX17-202ENST00000427123 CCDC150Q8NCX0 1101 aa22.04■■□□□ 1.12
SNX17-202ENST00000427123 CSRNP2Q9H175 543 aa22.04■■□□□ 1.12
SNX17-202ENST00000427123 HSD3B7Q9H2F3 369 aa22.04■■□□□ 1.12
SNX17-202ENST00000427123 LRRC4BQ9NT99 713 aa22.04■■□□□ 1.12
SNX17-202ENST00000427123 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.03■■□□□ 1.12
SNX17-202ENST00000427123 SKILP12757 684 aa22.03■■□□□ 1.12
SNX17-202ENST00000427123 SCG2P13521 617 aa22.03■■□□□ 1.12
SNX17-202ENST00000427123 LMOD1P29536 600 aaPredicted RBP22.03■■□□□ 1.12
SNX17-202ENST00000427123 PPP4CP60510 307 aa22.03■■□□□ 1.12
SNX17-202ENST00000427123 FANCCQ00597 558 aa22.03■■□□□ 1.12
SNX17-202ENST00000427123 NPY5RQ15761 445 aa22.03■■□□□ 1.12
SNX17-202ENST00000427123 CRY2Q49AN0 593 aa22.03■■□□□ 1.12
SNX17-202ENST00000427123 NT5DC1Q5TFE4 455 aa22.03■■□□□ 1.12
SNX17-202ENST00000427123 RCSD1Q6JBY9 416 aa22.03■■□□□ 1.12
SNX17-202ENST00000427123 SH3RF3Q8TEJ3 882 aaPredicted RBP22.03■■□□□ 1.12
SNX17-202ENST00000427123 SERTAD1Q9UHV2 236 aa22.03■■□□□ 1.12
SNX17-202ENST00000427123 CDK5RAP2Q96SN8 1893 aa22.03■■□□□ 1.12
SNX17-202ENST00000427123 LDHCP07864 332 aa22.02■■□□□ 1.12
SNX17-202ENST00000427123 ST5P78524 1137 aa22.02■■□□□ 1.12
SNX17-202ENST00000427123 HSP90AA2PQ14568 343 aaPredicted RBP22.02■■□□□ 1.12
SNX17-202ENST00000427123 EARS2Q5JPH6 523 aaKnown RBP22.02■■□□□ 1.12
SNX17-202ENST00000427123 SLC51AQ86UW1 340 aa22.02■■□□□ 1.12
SNX17-202ENST00000427123 DGKHQ86XP1 1220 aa22.02■■□□□ 1.12
SNX17-202ENST00000427123 FERMT2Q96AC1 680 aa22.02■■□□□ 1.12
SNX17-202ENST00000427123 KAT14Q9H8E8 782 aa22.02■■□□□ 1.12
SNX17-202ENST00000427123 AFF2P51816 1311 aa22.02■■□□□ 1.12
SNX17-202ENST00000427123 FOXN1O15353 648 aa22.02■■□□□ 1.12
SNX17-202ENST00000427123 ACTN4O43707 911 aaKnown RBP22.02■■□□□ 1.12
SNX17-202ENST00000427123 PFKFB3Q16875 520 aaPredicted RBP22.02■■□□□ 1.12
SNX17-202ENST00000427123 CCDC178Q5BJE1 867 aa22.02■■□□□ 1.12
SNX17-202ENST00000427123 CERS3Q8IU89 383 aa22.02■■□□□ 1.12
SNX17-202ENST00000427123 TRIML1Q8N9V2 468 aa22.02■■□□□ 1.12
SNX17-202ENST00000427123 ANKS1AQ92625 1134 aa22.02■■□□□ 1.12
SNX17-202ENST00000427123 MAN1B1Q9UKM7 699 aa22.02■■□□□ 1.12
SNX17-202ENST00000427123 DDX60LQ5H9U9 1706 aaKnown RBP22.01■■□□□ 1.11
SNX17-202ENST00000427123 CBFA2T2O43439 604 aa22.01■■□□□ 1.11
SNX17-202ENST00000427123 GPSM2P81274 684 aa22.01■■□□□ 1.11
SNX17-202ENST00000427123 TMC6Q7Z403 805 aa22.01■■□□□ 1.11
SNX17-202ENST00000427123 SEPT12Q8IYM1 358 aa22.01■■□□□ 1.11
SNX17-202ENST00000427123 SMARCE1Q969G3 411 aa22.01■■□□□ 1.11
SNX17-202ENST00000427123 CCDC34Q96HJ3 373 aa22.01■■□□□ 1.11
SNX17-202ENST00000427123 DACH1Q9UI36 760 aa22.01■■□□□ 1.11
SNX17-202ENST00000427123 ATP2B4P23634 1241 aa22.01■■□□□ 1.11
SNX17-202ENST00000427123 SARSP49591 514 aaKnown RBP22.01■■□□□ 1.11
SNX17-202ENST00000427123 TFAP4Q01664 338 aa22.01■■□□□ 1.11
SNX17-202ENST00000427123 TPD52L1Q16890 204 aaPredicted RBP22.01■■□□□ 1.11
SNX17-202ENST00000427123 C16orf45Q96MC5 204 aaPredicted RBP22.01■■□□□ 1.11
SNX17-202ENST00000427123 PRR29P0C7W0 189 aa22■■□□□ 1.11
SNX17-202ENST00000427123 GYS1P13807 737 aa22■■□□□ 1.11
SNX17-202ENST00000427123 DIXDC1Q155Q3 683 aa22■■□□□ 1.11
SNX17-202ENST00000427123 TTC38Q5R3I4 469 aa22■■□□□ 1.11
SNX17-202ENST00000427123 MLKLQ8NB16 471 aa22■■□□□ 1.11
SNX17-202ENST00000427123 RBM17Q96I25 401 aaKnown RBP22■■□□□ 1.11
SNX17-202ENST00000427123 KCND1Q9NSA2 647 aa22■■□□□ 1.11
SNX17-202ENST00000427123 UFL1O94874 794 aa21.99■■□□□ 1.11
SNX17-202ENST00000427123 BMP6P22004 513 aa21.99■■□□□ 1.11
SNX17-202ENST00000427123 TRAPPC10P48553 1259 aa21.99■■□□□ 1.11
SNX17-202ENST00000427123 LRRC37AA6NMS7 1700 aa21.99■■□□□ 1.11
SNX17-202ENST00000427123 ATP1A3P13637 1013 aa21.99■■□□□ 1.11
SNX17-202ENST00000427123 NLRP5P59047 1200 aa21.99■■□□□ 1.11
SNX17-202ENST00000427123 MORC3Q14149 939 aa21.99■■□□□ 1.11
SNX17-202ENST00000427123 GRIK5Q16478 980 aa21.99■■□□□ 1.11
SNX17-202ENST00000427123 SLC4A8Q2Y0W8 1093 aa21.99■■□□□ 1.11
SNX17-202ENST00000427123 GPR101Q96P66 508 aaPredicted RBP21.99■■□□□ 1.11
SNX17-202ENST00000427123 MAP7D2Q96T17 732 aa21.99■■□□□ 1.11
SNX17-202ENST00000427123 RTFDC1Q9BY42 306 aaPredicted RBP21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms