RNA–Protein interactions for RNA: ENST00000426763.3

RPL28-202, Transcript of ribosomal protein L28, humanhuman

TSL 1 (best)

Gene RPL28, Length 5,620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-202ENST00000426763 BLIDQ8IZY5 108 aa15.58■□□□□ 0.08
RPL28-202ENST00000426763 ARHGEF1Q92888 912 aaKnown RBP15.58■□□□□ 0.08
RPL28-202ENST00000426763 FNBP1Q96RU3 617 aa15.58■□□□□ 0.08
RPL28-202ENST00000426763 IGKV5-2P06315 115 aa15.58■□□□□ 0.08
RPL28-202ENST00000426763 GNG11P61952 73 aa15.58■□□□□ 0.08
RPL28-202ENST00000426763 DYNLL1P63167 89 aaKnown RBP15.58■□□□□ 0.08
RPL28-202ENST00000426763 TXNRD1Q16881 649 aa15.58■□□□□ 0.08
RPL28-202ENST00000426763 GALNT17Q6IS24 598 aa15.58■□□□□ 0.08
RPL28-202ENST00000426763 TMCO3Q6UWJ1 677 aa15.58■□□□□ 0.08
RPL28-202ENST00000426763 LEO1Q8WVC0 666 aaPredicted RBP15.58■□□□□ 0.08
RPL28-202ENST00000426763 ANTXR1Q9H6X2 564 aa15.58■□□□□ 0.08
RPL28-202ENST00000426763 CEP170BQ9Y4F5 1589 aaPredicted RBP15.58■□□□□ 0.08
RPL28-202ENST00000426763 CIAPIN1Q6FI81 312 aa15.58■□□□□ 0.08
RPL28-202ENST00000426763 FAM173BQ6P4H8 233 aa15.58■□□□□ 0.08
RPL28-202ENST00000426763 GCOM1H8Y6P7 765 aaPredicted RBP15.57■□□□□ 0.08
RPL28-202ENST00000426763 M0R2C6 588 aa15.57■□□□□ 0.08
RPL28-202ENST00000426763 POLR2MP0CAP2 368 aa15.57■□□□□ 0.08
RPL28-202ENST00000426763 DHX36Q9H2U1 1008 aaKnown RBP15.57■□□□□ 0.08
RPL28-202ENST00000426763 DIP2AQ14689 1571 aa15.57■□□□□ 0.08
RPL28-202ENST00000426763 PRPHP41219 470 aa15.57■□□□□ 0.08
RPL28-202ENST00000426763 DCAF17Q5H9S7 520 aaPredicted RBP15.57■□□□□ 0.08
RPL28-202ENST00000426763 TAF3Q5VWG9 929 aa15.57■□□□□ 0.08
RPL28-202ENST00000426763 CEP135Q66GS9 1140 aa15.57■□□□□ 0.08
RPL28-202ENST00000426763 KCNQ2O43526 872 aa15.57■□□□□ 0.08
RPL28-202ENST00000426763 CALUO43852 315 aaPredicted RBP15.57■□□□□ 0.08
RPL28-202ENST00000426763 CABP7Q86V35 215 aa15.57■□□□□ 0.08
RPL28-202ENST00000426763 MSANTD4Q8NCY6 345 aa15.57■□□□□ 0.08
RPL28-202ENST00000426763 SCG2P13521 617 aa15.57■□□□□ 0.08
RPL28-202ENST00000426763 ARHGEF16Q5VV41 709 aa15.57■□□□□ 0.08
RPL28-202ENST00000426763 NRKQ7Z2Y5 1582 aa15.57■□□□□ 0.08
RPL28-202ENST00000426763 FLOT1O75955 427 aa15.57■□□□□ 0.08
RPL28-202ENST00000426763 SKILP12757 684 aa15.57■□□□□ 0.08
RPL28-202ENST00000426763 TBC1D9BQ66K14 1250 aa15.57■□□□□ 0.08
RPL28-202ENST00000426763 CCDC186Q7Z3E2 898 aa15.57■□□□□ 0.08
RPL28-202ENST00000426763 PALD1Q9ULE6 856 aa15.57■□□□□ 0.08
RPL28-202ENST00000426763 CTNND2Q9UQB3 1225 aa15.57■□□□□ 0.08
RPL28-202ENST00000426763 TMEM232C9JQI7 657 aa15.56■□□□□ 0.08
RPL28-202ENST00000426763 HARSP12081 509 aaKnown RBP15.56■□□□□ 0.08
RPL28-202ENST00000426763 ACTN2P35609 894 aa15.56■□□□□ 0.08
RPL28-202ENST00000426763 KRT83P78385 493 aa15.56■□□□□ 0.08
RPL28-202ENST00000426763 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.56■□□□□ 0.08
RPL28-202ENST00000426763 CEP83Q9Y592 693 aa15.56■□□□□ 0.08
RPL28-202ENST00000426763 SASH1O94885 1247 aa15.56■□□□□ 0.08
RPL28-202ENST00000426763 ARID5AQ03989 594 aa15.56■□□□□ 0.08
RPL28-202ENST00000426763 CDAN1Q8IWY9 1227 aa15.56■□□□□ 0.08
RPL28-202ENST00000426763 FNBP4Q8N3X1 1017 aaPredicted RBP15.56■□□□□ 0.08
RPL28-202ENST00000426763 GAS7O60861 476 aa15.56■□□□□ 0.08
RPL28-202ENST00000426763 GOLGA8HP0CJ92 632 aa15.56■□□□□ 0.08
RPL28-202ENST00000426763 DNM2P50570 870 aa15.56■□□□□ 0.08
RPL28-202ENST00000426763 CCDC42Q96M95 316 aa15.56■□□□□ 0.08
RPL28-202ENST00000426763 NT5C3AQ9H0P0 336 aa15.56■□□□□ 0.08
RPL28-202ENST00000426763 ADD1P35611 737 aaKnown RBP15.56■□□□□ 0.08
RPL28-202ENST00000426763 GRIPAP1Q4V328 841 aa15.56■□□□□ 0.08
RPL28-202ENST00000426763 GPATCH4Q5T3I0 446 aaKnown RBP15.56■□□□□ 0.08
RPL28-202ENST00000426763 CMTR1Q8N1G2 835 aaKnown RBP15.56■□□□□ 0.08
RPL28-202ENST00000426763 SERPINB13Q9UIV8 391 aa15.56■□□□□ 0.08
RPL28-202ENST00000426763 PLEKHG2Q9H7P9 1386 aa15.56■□□□□ 0.08
RPL28-202ENST00000426763 POTEB2H3BUK9 544 aa15.55■□□□□ 0.08
RPL28-202ENST00000426763 RBM10P98175 930 aaKnown RBP15.55■□□□□ 0.08
RPL28-202ENST00000426763 RASGRF1Q13972 1273 aa15.55■□□□□ 0.08
RPL28-202ENST00000426763 PI16Q6UXB8 463 aa15.55■□□□□ 0.08
RPL28-202ENST00000426763 CLSTN2Q9H4D0 955 aa15.55■□□□□ 0.08
RPL28-202ENST00000426763 C21orf2O43822 256 aa15.55■□□□□ 0.08
RPL28-202ENST00000426763 PTGS1P23219 599 aa15.55■□□□□ 0.08
RPL28-202ENST00000426763 USP14P54578 494 aa15.55■□□□□ 0.08
RPL28-202ENST00000426763 BIRC3Q13489 604 aa15.55■□□□□ 0.08
RPL28-202ENST00000426763 KIF22Q14807 665 aa15.55■□□□□ 0.08
RPL28-202ENST00000426763 SPECC1Q5M775 1068 aa15.55■□□□□ 0.08
RPL28-202ENST00000426763 TPCN1Q9ULQ1 816 aa15.55■□□□□ 0.08
RPL28-202ENST00000426763 SPATA31A1Q5TZJ5 1347 aa15.55■□□□□ 0.08
RPL28-202ENST00000426763 TTLL1O95922 423 aa15.55■□□□□ 0.08
RPL28-202ENST00000426763 WDR44Q5JSH3 913 aa15.55■□□□□ 0.08
RPL28-202ENST00000426763 LCORLQ8N3X6 602 aa15.55■□□□□ 0.08
RPL28-202ENST00000426763 LRRC7Q96NW7 1537 aa15.55■□□□□ 0.08
RPL28-202ENST00000426763 SETD1BQ9UPS6 1966 aaKnown RBP15.55■□□□□ 0.08
RPL28-202ENST00000426763 ASPRV1Q53RT3 343 aa15.55■□□□□ 0.08
RPL28-202ENST00000426763 MYSM1Q5VVJ2 828 aa15.55■□□□□ 0.08
RPL28-202ENST00000426763 NOSTRINQ8IVI9 506 aa15.55■□□□□ 0.08
RPL28-202ENST00000426763 LMBR1Q8WVP7 490 aa15.55■□□□□ 0.08
RPL28-202ENST00000426763 IFNKQ9P0W0 207 aa15.55■□□□□ 0.08
RPL28-202ENST00000426763 KDM3AQ9Y4C1 1321 aa15.54■□□□□ 0.08
RPL28-202ENST00000426763 DPH6Q7L8W6 267 aa15.54■□□□□ 0.08
RPL28-202ENST00000426763 KCNG1Q9UIX4 513 aa15.54■□□□□ 0.08
RPL28-202ENST00000426763 GOLGA6L10A0A0M3HER8 536 aa15.54■□□□□ 0.08
RPL28-202ENST00000426763 CETN3O15182 167 aa15.54■□□□□ 0.08
RPL28-202ENST00000426763 ZNF202O95125 648 aa15.54■□□□□ 0.08
RPL28-202ENST00000426763 HERC4Q5GLZ8 1057 aaPredicted RBP15.54■□□□□ 0.08
RPL28-202ENST00000426763 KANSL2Q9H9L4 492 aa15.54■□□□□ 0.08
RPL28-202ENST00000426763 SPC25Q9HBM1 224 aa15.54■□□□□ 0.08
RPL28-202ENST00000426763 LUC7L2Q9Y383 392 aaKnown RBP15.54■□□□□ 0.08
RPL28-202ENST00000426763 H0YHG0 523 aa15.54■□□□□ 0.08
RPL28-202ENST00000426763 TACC1O75410 805 aa15.54■□□□□ 0.08
RPL28-202ENST00000426763 MECOMQ03112 1051 aa15.54■□□□□ 0.08
RPL28-202ENST00000426763 MIER3Q7Z3K6 550 aa15.54■□□□□ 0.08
RPL28-202ENST00000426763 ANKRD35Q8N283 1001 aa15.54■□□□□ 0.08
RPL28-202ENST00000426763 ISCA1Q9BUE6 129 aa15.54■□□□□ 0.08
RPL28-202ENST00000426763 NOC4LQ9BVI4 516 aaKnown RBP15.54■□□□□ 0.08
RPL28-202ENST00000426763 TESPA1A2RU30 521 aaPredicted RBP15.54■□□□□ 0.08
RPL28-202ENST00000426763 IFFO1Q0D2I5 559 aa15.54■□□□□ 0.08
RPL28-202ENST00000426763 HLTFQ14527 1009 aaKnown RBP eCLIP15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms