RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 KRI1Q8N9T8 703 aaKnown RBP15.26■□□□□ 0.03
USP42-203ENST00000426246 NEK11Q8NG66 645 aa15.26■□□□□ 0.03
USP42-203ENST00000426246 RASGRP4Q8TDF6 673 aa15.26■□□□□ 0.03
USP42-203ENST00000426246 DRC1Q96MC2 740 aa15.26■□□□□ 0.03
USP42-203ENST00000426246 BAG1Q99933 345 aaPredicted RBP15.26■□□□□ 0.03
USP42-203ENST00000426246 NYXQ9GZU5 481 aa15.26■□□□□ 0.03
USP42-203ENST00000426246 RGS17Q9UGC6 210 aaPredicted RBP15.26■□□□□ 0.03
USP42-203ENST00000426246 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.26■□□□□ 0.03
USP42-203ENST00000426246 RASGRF1Q13972 1273 aa15.26■□□□□ 0.03
USP42-203ENST00000426246 NFIXQ14938 502 aa15.26■□□□□ 0.03
USP42-203ENST00000426246 WWC2Q6AWC2 1192 aa15.26■□□□□ 0.03
USP42-203ENST00000426246 BRAPQ7Z569 592 aa15.26■□□□□ 0.03
USP42-203ENST00000426246 SPATA5Q8NB90 893 aa15.26■□□□□ 0.03
USP42-203ENST00000426246 CELF1Q92879 486 aaKnown RBP15.26■□□□□ 0.03
USP42-203ENST00000426246 HOOK1Q9UJC3 728 aaKnown RBP15.26■□□□□ 0.03
USP42-203ENST00000426246 SLC39A14Q15043 492 aa15.26■□□□□ 0.03
USP42-203ENST00000426246 BSDC1Q9NW68 430 aaPredicted RBP15.26■□□□□ 0.03
USP42-203ENST00000426246 A0A0U1RQJ8 604 aa15.25■□□□□ 0.03
USP42-203ENST00000426246 NEMFO60524 1076 aa15.25■□□□□ 0.03
USP42-203ENST00000426246 GYS1P13807 737 aa15.25■□□□□ 0.03
USP42-203ENST00000426246 SLC5A1P13866 664 aa15.25■□□□□ 0.03
USP42-203ENST00000426246 IGHMBP2P38935 993 aaKnown RBP15.25■□□□□ 0.03
USP42-203ENST00000426246 MRPS25P82663 173 aaKnown RBP15.25■□□□□ 0.03
USP42-203ENST00000426246 ATRIPQ8WXE1 791 aa15.25■□□□□ 0.03
USP42-203ENST00000426246 NUP88Q99567 741 aaPredicted RBP15.25■□□□□ 0.03
USP42-203ENST00000426246 NOL10Q9BSC4 688 aaKnown RBP15.25■□□□□ 0.03
USP42-203ENST00000426246 ARGLU1Q9NWB6 273 aaPredicted RBP15.25■□□□□ 0.03
USP42-203ENST00000426246 CMA1P23946 247 aa15.25■□□□□ 0.03
USP42-203ENST00000426246 RFC4P35249 363 aa15.25■□□□□ 0.03
USP42-203ENST00000426246 EVX2Q03828 476 aa15.25■□□□□ 0.03
USP42-203ENST00000426246 TOGARAM2Q6ZUX3 1019 aa15.25■□□□□ 0.03
USP42-203ENST00000426246 NBPF5PQ86XG9 351 aaPredicted RBP15.25■□□□□ 0.03
USP42-203ENST00000426246 CCDC150Q8NCX0 1101 aa15.25■□□□□ 0.03
USP42-203ENST00000426246 CPVLQ9H3G5 476 aa15.25■□□□□ 0.03
USP42-203ENST00000426246 NRXN2Q9P2S2 1712 aa15.25■□□□□ 0.03
USP42-203ENST00000426246 CAVIN2O95810 425 aa15.25■□□□□ 0.03
USP42-203ENST00000426246 COL1A1P02452 1464 aaPredicted RBP15.25■□□□□ 0.03
USP42-203ENST00000426246 FOXP4Q8IVH2 680 aaPredicted RBP15.25■□□□□ 0.03
USP42-203ENST00000426246 TRIM34Q9BYJ4 488 aa15.25■□□□□ 0.03
USP42-203ENST00000426246 SOWAHDA6NJG2 315 aa15.24■□□□□ 0.03
USP42-203ENST00000426246 TEX33O43247 280 aa15.24■□□□□ 0.03
USP42-203ENST00000426246 YEATS4O95619 227 aa15.24■□□□□ 0.03
USP42-203ENST00000426246 ADD2P35612 726 aa15.24■□□□□ 0.03
USP42-203ENST00000426246 FMR1Q06787 632 aaKnown RBP eCLIP15.24■□□□□ 0.03
USP42-203ENST00000426246 ERO1AQ96HE7 468 aa15.24■□□□□ 0.03
USP42-203ENST00000426246 CAPZA3Q96KX2 299 aa15.24■□□□□ 0.03
USP42-203ENST00000426246 CSRNP2Q9H175 543 aa15.24■□□□□ 0.03
USP42-203ENST00000426246 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.24■□□□□ 0.03
USP42-203ENST00000426246 N4BP3O15049 544 aa15.24■□□□□ 0.03
USP42-203ENST00000426246 NLRP5P59047 1200 aa15.24■□□□□ 0.03
USP42-203ENST00000426246 POSTNQ15063 836 aa15.24■□□□□ 0.03
USP42-203ENST00000426246 ZNF569Q5MCW4 686 aa15.24■□□□□ 0.03
USP42-203ENST00000426246 METTL16Q86W50 562 aaKnown RBP15.24■□□□□ 0.03
USP42-203ENST00000426246 WDR24Q96S15 920 aa15.24■□□□□ 0.03
USP42-203ENST00000426246 CDC5LQ99459 802 aaKnown RBP15.24■□□□□ 0.03
USP42-203ENST00000426246 ZNF804BA4D1E1 1349 aa15.24■□□□□ 0.03
USP42-203ENST00000426246 CBFA2T2O43439 604 aa15.24■□□□□ 0.03
USP42-203ENST00000426246 CLCN6P51797 869 aa15.24■□□□□ 0.03
USP42-203ENST00000426246 TXNRD1Q16881 649 aa15.24■□□□□ 0.03
USP42-203ENST00000426246 RRAGBQ5VZM2 374 aa15.24■□□□□ 0.03
USP42-203ENST00000426246 PIK3AP1Q6ZUJ8 805 aa15.24■□□□□ 0.03
USP42-203ENST00000426246 PSMB7Q99436 277 aa15.24■□□□□ 0.03
USP42-203ENST00000426246 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.24■□□□□ 0.03
USP42-203ENST00000426246 MINPP1Q9UNW1 487 aa15.24■□□□□ 0.03
USP42-203ENST00000426246 TFR2Q9UP52 801 aa15.24■□□□□ 0.03
USP42-203ENST00000426246 MATR3P43243 847 aaKnown RBP eCLIP15.23■□□□□ 0.03
USP42-203ENST00000426246 AXDND1Q5T1B0 1012 aaPredicted RBP15.23■□□□□ 0.03
USP42-203ENST00000426246 TPTE2Q6XPS3 522 aa15.23■□□□□ 0.03
USP42-203ENST00000426246 CCDC102AQ96A19 550 aa15.23■□□□□ 0.03
USP42-203ENST00000426246 AATFQ9NY61 560 aaKnown RBP eCLIP15.23■□□□□ 0.03
USP42-203ENST00000426246 STX8Q9UNK0 236 aa15.23■□□□□ 0.03
USP42-203ENST00000426246 TCRBV5S4A2TA0A5A2 114 aa15.23■□□□□ 0.03
USP42-203ENST00000426246 ETF1P62495 437 aaKnown RBP15.23■□□□□ 0.03
USP42-203ENST00000426246 KRBA2Q6ZNG9 492 aa15.23■□□□□ 0.03
USP42-203ENST00000426246 NOSTRINQ8IVI9 506 aa15.23■□□□□ 0.03
USP42-203ENST00000426246 POLR3EQ9NVU0 708 aa15.23■□□□□ 0.03
USP42-203ENST00000426246 ANKRD31Q8N7Z5 1873 aa15.23■□□□□ 0.03
USP42-203ENST00000426246 IRS2Q9Y4H2 1338 aa15.23■□□□□ 0.03
USP42-203ENST00000426246 ATP2B2Q01814 1243 aa15.23■□□□□ 0.03
USP42-203ENST00000426246 IFIT1BQ5T764 474 aaKnown RBP15.23■□□□□ 0.03
USP42-203ENST00000426246 SLC51AQ86UW1 340 aa15.23■□□□□ 0.03
USP42-203ENST00000426246 TAB2Q9NYJ8 693 aa15.23■□□□□ 0.03
USP42-203ENST00000426246 CTNND2Q9UQB3 1225 aa15.23■□□□□ 0.03
USP42-203ENST00000426246 PLSCR1O15162 318 aa15.22■□□□□ 0.03
USP42-203ENST00000426246 TNNT3P45378 269 aaPredicted RBP15.22■□□□□ 0.03
USP42-203ENST00000426246 ANKRD18AQ8IVF6 992 aa15.22■□□□□ 0.03
USP42-203ENST00000426246 ANKRD7Q92527 254 aa15.22■□□□□ 0.03
USP42-203ENST00000426246 ANKRD65E5RJM6 399 aa15.22■□□□□ 0.03
USP42-203ENST00000426246 SH2B2O14492 632 aaPredicted RBP15.22■□□□□ 0.03
USP42-203ENST00000426246 GPKOWQ92917 476 aaPredicted RBP eCLIP15.22■□□□□ 0.03
USP42-203ENST00000426246 GUCA1BQ9UMX6 200 aa15.22■□□□□ 0.03
USP42-203ENST00000426246 PPP2R2CQ9Y2T4 447 aa15.22■□□□□ 0.03
USP42-203ENST00000426246 CACNA1SQ13698 1873 aa15.22■□□□□ 0.03
USP42-203ENST00000426246 ZMYND10O75800 440 aa15.22■□□□□ 0.03
USP42-203ENST00000426246 PLEKHA8P1O95397 391 aa15.22■□□□□ 0.03
USP42-203ENST00000426246 LMAN1P49257 510 aa15.22■□□□□ 0.03
USP42-203ENST00000426246 AKNAD1Q5T1N1 836 aa15.22■□□□□ 0.03
USP42-203ENST00000426246 IGSF22Q8N9C0 903 aa15.22■□□□□ 0.03
USP42-203ENST00000426246 ZMYM6O95789 1325 aa15.21■□□□□ 0.03
USP42-203ENST00000426246 MYH13Q9UKX3 1938 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms