RNA–Protein interactions for RNA: ENST00000426150.5

SSBP3-207, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 851 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-207ENST00000426150 ASXL2Q76L83 1435 aa8.66□□□□□ -1.02
SSBP3-207ENST00000426150 KDM2BQ8NHM5 1336 aa8.66□□□□□ -1.02
SSBP3-207ENST00000426150 A0A0A0MRY4 1105 aa8.66□□□□□ -1.02
SSBP3-207ENST00000426150 WISP1O95388 367 aa8.66□□□□□ -1.02
SSBP3-207ENST00000426150 YARSP54577 528 aaKnown RBP8.66□□□□□ -1.02
SSBP3-207ENST00000426150 SSRP1Q08945 709 aaKnown RBP8.66□□□□□ -1.02
SSBP3-207ENST00000426150 RNF187Q5TA31 235 aaPredicted RBP8.66□□□□□ -1.02
SSBP3-207ENST00000426150 EEPD1Q7L9B9 569 aa8.66□□□□□ -1.02
SSBP3-207ENST00000426150 SLFN12Q8IYM2 578 aa8.66□□□□□ -1.02
SSBP3-207ENST00000426150 FMR1NBQ8N0W7 255 aaPredicted RBP8.66□□□□□ -1.02
SSBP3-207ENST00000426150 RNF214Q8ND24 703 aa8.66□□□□□ -1.02
SSBP3-207ENST00000426150 FAM13CQ8NE31 585 aa8.66□□□□□ -1.02
SSBP3-207ENST00000426150 GPATCH3Q96I76 525 aa8.66□□□□□ -1.02
SSBP3-207ENST00000426150 TMEM87BQ96K49 555 aa8.66□□□□□ -1.02
SSBP3-207ENST00000426150 FANCD2OSQ96PS1 177 aa8.66□□□□□ -1.02
SSBP3-207ENST00000426150 DISC1Q9NRI5 854 aa8.66□□□□□ -1.02
SSBP3-207ENST00000426150 PPRC1Q5VV67 1664 aaKnown RBP8.65□□□□□ -1.02
SSBP3-207ENST00000426150 MEGF11A6BM72 1044 aa8.65□□□□□ -1.02
SSBP3-207ENST00000426150 POLR2BP30876 1174 aaKnown RBP8.65□□□□□ -1.02
SSBP3-207ENST00000426150 GMPRP36959 345 aa8.65□□□□□ -1.02
SSBP3-207ENST00000426150 RAC1P63000 192 aa8.65□□□□□ -1.02
SSBP3-207ENST00000426150 KIAA1211Q6ZU35 1233 aa8.65□□□□□ -1.02
SSBP3-207ENST00000426150 HID1Q8IV36 788 aa8.65□□□□□ -1.02
SSBP3-207ENST00000426150 MRPL41Q8IXM3 137 aaKnown RBP8.65□□□□□ -1.02
SSBP3-207ENST00000426150 ZNF507Q8TCN5 953 aa8.65□□□□□ -1.02
SSBP3-207ENST00000426150 WHAMMQ8TF30 809 aa8.65□□□□□ -1.02
SSBP3-207ENST00000426150 KLHL6Q8WZ60 621 aa8.65□□□□□ -1.02
SSBP3-207ENST00000426150 ZNF214Q9UL59 606 aaPredicted RBP8.65□□□□□ -1.02
SSBP3-207ENST00000426150 PLB1Q6P1J6 1458 aa8.64□□□□□ -1.03
SSBP3-207ENST00000426150 PTPRGP23470 1445 aa8.64□□□□□ -1.03
SSBP3-207ENST00000426150 CCNFP41002 786 aa8.64□□□□□ -1.03
SSBP3-207ENST00000426150 SLC7A5Q01650 507 aa8.64□□□□□ -1.03
SSBP3-207ENST00000426150 PTPROQ16827 1216 aa8.64□□□□□ -1.03
SSBP3-207ENST00000426150 NUTM2GQ5VZR2 741 aa8.64□□□□□ -1.03
SSBP3-207ENST00000426150 SLC6A19Q695T7 634 aa8.64□□□□□ -1.03
SSBP3-207ENST00000426150 KIAA1211LQ6NV74 962 aa8.64□□□□□ -1.03
SSBP3-207ENST00000426150 KIAA0907Q7Z7F0 614 aaPredicted RBP8.64□□□□□ -1.03
SSBP3-207ENST00000426150 TRIM11Q96F44 468 aa8.64□□□□□ -1.03
SSBP3-207ENST00000426150 RNF208Q9H0X6 261 aa8.64□□□□□ -1.03
SSBP3-207ENST00000426150 ATXN3LQ9H3M9 355 aa8.64□□□□□ -1.03
SSBP3-207ENST00000426150 SUGCTQ9HAC7 445 aa8.64□□□□□ -1.03
SSBP3-207ENST00000426150 FBRSQ9HAH7 460 aa8.64□□□□□ -1.03
SSBP3-207ENST00000426150 RRAGCQ9HB90 399 aa8.64□□□□□ -1.03
SSBP3-207ENST00000426150 AP4E1Q9UPM8 1137 aa8.64□□□□□ -1.03
SSBP3-207ENST00000426150 ERICH3Q5RHP9 1530 aa8.64□□□□□ -1.03
SSBP3-207ENST00000426150 TEX14Q8IWB6 1497 aa8.64□□□□□ -1.03
SSBP3-207ENST00000426150 SUSD5O60279 629 aa8.63□□□□□ -1.03
SSBP3-207ENST00000426150 ADH5P11766 374 aa8.63□□□□□ -1.03
SSBP3-207ENST00000426150 NKG7Q16617 165 aa8.63□□□□□ -1.03
SSBP3-207ENST00000426150 SLC10A6Q3KNW5 377 aa8.63□□□□□ -1.03
SSBP3-207ENST00000426150 GNPTABQ3T906 1256 aa8.63□□□□□ -1.03
SSBP3-207ENST00000426150 C16orf86Q6ZW13 317 aa8.63□□□□□ -1.03
SSBP3-207ENST00000426150 ACAD11Q709F0 780 aa8.63□□□□□ -1.03
SSBP3-207ENST00000426150 PHACTR4Q8IZ21 702 aa8.63□□□□□ -1.03
SSBP3-207ENST00000426150 SMG8Q8ND04 991 aaKnown RBP8.63□□□□□ -1.03
SSBP3-207ENST00000426150 SLKQ9H2G2 1235 aaPredicted RBP8.63□□□□□ -1.03
SSBP3-207ENST00000426150 CYP4F12Q9HCS2 524 aa8.63□□□□□ -1.03
SSBP3-207ENST00000426150 PTCH2Q9Y6C5 1203 aa8.63□□□□□ -1.03
SSBP3-207ENST00000426150 RUSC2Q8N2Y8 1516 aa8.63□□□□□ -1.03
SSBP3-207ENST00000426150 GLI2P10070 1586 aa8.62□□□□□ -1.03
SSBP3-207ENST00000426150 RGS13O14921 159 aa8.62□□□□□ -1.03
SSBP3-207ENST00000426150 NEFMP07197 916 aa8.62□□□□□ -1.03
SSBP3-207ENST00000426150 TTLL4Q14679 1199 aa8.62□□□□□ -1.03
SSBP3-207ENST00000426150 DHRS1Q96LJ7 313 aa8.62□□□□□ -1.03
SSBP3-207ENST00000426150 KIF2CQ99661 725 aa8.62□□□□□ -1.03
SSBP3-207ENST00000426150 EPN3Q9H201 632 aa8.62□□□□□ -1.03
SSBP3-207ENST00000426150 WFS1O76024 890 aa8.61□□□□□ -1.03
SSBP3-207ENST00000426150 HCLS1P14317 486 aaPredicted RBP8.61□□□□□ -1.03
SSBP3-207ENST00000426150 PMS1P54277 932 aaKnown RBP8.61□□□□□ -1.03
SSBP3-207ENST00000426150 SOX4Q06945 474 aaPredicted RBP8.61□□□□□ -1.03
SSBP3-207ENST00000426150 BBS9Q3SYG4 887 aa8.61□□□□□ -1.03
SSBP3-207ENST00000426150 CDC37L1Q7L3B6 337 aa8.61□□□□□ -1.03
SSBP3-207ENST00000426150 UBE3DQ7Z6J8 389 aa8.61□□□□□ -1.03
SSBP3-207ENST00000426150 FILIP1Q7Z7B0 1213 aa8.61□□□□□ -1.03
SSBP3-207ENST00000426150 TMEM192Q8IY95 271 aa8.61□□□□□ -1.03
SSBP3-207ENST00000426150 KCT2Q8NC54 265 aa8.61□□□□□ -1.03
SSBP3-207ENST00000426150 NEDD1Q8NHV4 660 aa8.61□□□□□ -1.03
SSBP3-207ENST00000426150 SLC6A18Q96N87 628 aa8.61□□□□□ -1.03
SSBP3-207ENST00000426150 FEZ1Q99689 392 aa8.61□□□□□ -1.03
SSBP3-207ENST00000426150 DPH2Q9BQC3 489 aaPredicted RBP8.61□□□□□ -1.03
SSBP3-207ENST00000426150 IFT57Q9NWB7 429 aa8.61□□□□□ -1.03
SSBP3-207ENST00000426150 PRKAB1Q9Y478 270 aa8.61□□□□□ -1.03
SSBP3-207ENST00000426150 ABCC2Q92887 1545 aa8.6□□□□□ -1.03
SSBP3-207ENST00000426150 DNAJC6O75061 913 aa8.6□□□□□ -1.03
SSBP3-207ENST00000426150 UBOX5O94941 541 aa8.6□□□□□ -1.03
SSBP3-207ENST00000426150 DRD2P14416 443 aa8.6□□□□□ -1.03
SSBP3-207ENST00000426150 CAP2P40123 477 aa8.6□□□□□ -1.03
SSBP3-207ENST00000426150 SLBPQ14493 270 aaKnown RBP eCLIP8.6□□□□□ -1.03
SSBP3-207ENST00000426150 TKFCQ3LXA3 575 aa8.6□□□□□ -1.03
SSBP3-207ENST00000426150 TREML4Q6UXN2 200 aa8.6□□□□□ -1.03
SSBP3-207ENST00000426150 ISL2Q96A47 359 aa8.6□□□□□ -1.03
SSBP3-207ENST00000426150 CCDC74BQ96LY2 380 aa8.6□□□□□ -1.03
SSBP3-207ENST00000426150 SPATA9Q9BWV2 254 aa8.6□□□□□ -1.03
SSBP3-207ENST00000426150 BRINP2Q9C0B6 783 aa8.6□□□□□ -1.03
SSBP3-207ENST00000426150 MRPL18Q9H0U6 180 aaKnown RBP8.6□□□□□ -1.03
SSBP3-207ENST00000426150 GSX1Q9H4S2 264 aaPredicted RBP8.6□□□□□ -1.03
SSBP3-207ENST00000426150 SPC25Q9HBM1 224 aa8.6□□□□□ -1.03
SSBP3-207ENST00000426150 SUCOQ9UBS9 1254 aaKnown RBP8.6□□□□□ -1.03
SSBP3-207ENST00000426150 hCG_2014768A0A024R1R8 64 aa8.59□□□□□ -1.03
SSBP3-207ENST00000426150 IQCA1LA6NCM1 817 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms