RNA–Protein interactions for RNA: ENST00000425835.6

HDAC2-202, Transcript of histone deacetylase 2, humanhuman

TSL 2

Gene HDAC2, Length 553 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-202ENST00000425835 TMEM40Q8WWA1 233 aa5.13□□□□□ -1.59
HDAC2-202ENST00000425835 SPATA32Q96LK8 384 aa5.13□□□□□ -1.59
HDAC2-202ENST00000425835 CCDC74BQ96LY2 380 aa5.13□□□□□ -1.59
HDAC2-202ENST00000425835 HEXIM2Q96MH2 286 aaKnown RBP5.13□□□□□ -1.59
HDAC2-202ENST00000425835 CRBNQ96SW2 442 aa5.13□□□□□ -1.59
HDAC2-202ENST00000425835 TINF2Q9BSI4 451 aa5.13□□□□□ -1.59
HDAC2-202ENST00000425835 GTF2IRD1Q9UHL9 959 aa5.13□□□□□ -1.59
HDAC2-202ENST00000425835 ZNRF3Q9ULT6 936 aa5.13□□□□□ -1.59
HDAC2-202ENST00000425835 RNF112Q9ULX5 631 aa5.13□□□□□ -1.59
HDAC2-202ENST00000425835 CNTNAP4Q9C0A0 1308 aa5.13□□□□□ -1.59
HDAC2-202ENST00000425835 GNAT3A8MTJ3 354 aa5.12□□□□□ -1.59
HDAC2-202ENST00000425835 DNAJA1P31689 397 aaKnown RBP5.12□□□□□ -1.59
HDAC2-202ENST00000425835 ETV3P41162 512 aa5.12□□□□□ -1.59
HDAC2-202ENST00000425835 SOX9P48436 509 aa5.12□□□□□ -1.59
HDAC2-202ENST00000425835 EIF6P56537 245 aaKnown RBP5.12□□□□□ -1.59
HDAC2-202ENST00000425835 CPSF6Q16630 551 aaKnown RBP eCLIP5.12□□□□□ -1.59
HDAC2-202ENST00000425835 SFRP5Q5T4F7 317 aa5.12□□□□□ -1.59
HDAC2-202ENST00000425835 RUFY4Q6ZNE9 571 aa5.12□□□□□ -1.59
HDAC2-202ENST00000425835 NLRC3Q7RTR2 1065 aa5.12□□□□□ -1.59
HDAC2-202ENST00000425835 SLFN12Q8IYM2 578 aa5.12□□□□□ -1.59
HDAC2-202ENST00000425835 PLD6Q8N2A8 252 aaKnown RBP5.12□□□□□ -1.59
HDAC2-202ENST00000425835 ATG4CQ96DT6 458 aa5.12□□□□□ -1.59
HDAC2-202ENST00000425835 ZC3H7BQ9UGR2 993 aaKnown RBP5.12□□□□□ -1.59
HDAC2-202ENST00000425835 PRR33A8MZF0 331 aa5.11□□□□□ -1.59
HDAC2-202ENST00000425835 FAM155AB1AL88 458 aaPredicted RBP5.11□□□□□ -1.59
HDAC2-202ENST00000425835 MED26O95402 600 aa5.11□□□□□ -1.59
HDAC2-202ENST00000425835 IMPDH2P12268 514 aa5.11□□□□□ -1.59
HDAC2-202ENST00000425835 ZC3H6P61129 1189 aaKnown RBP5.11□□□□□ -1.59
HDAC2-202ENST00000425835 COL9A2Q14055 689 aaPredicted RBP5.11□□□□□ -1.59
HDAC2-202ENST00000425835 LRRFIP1Q32MZ4 808 aaKnown RBP5.11□□□□□ -1.59
HDAC2-202ENST00000425835 NAALADL2Q58DX5 795 aa5.11□□□□□ -1.59
HDAC2-202ENST00000425835 ZNF746Q6NUN9 644 aaPredicted RBP5.11□□□□□ -1.59
HDAC2-202ENST00000425835 LSRQ86X29 649 aaPredicted RBP5.11□□□□□ -1.59
HDAC2-202ENST00000425835 DNAJB8Q8NHS0 232 aa5.11□□□□□ -1.59
HDAC2-202ENST00000425835 PPP1R13LQ8WUF5 828 aa5.11□□□□□ -1.59
HDAC2-202ENST00000425835 ANAPC16Q96DE5 110 aa5.11□□□□□ -1.59
HDAC2-202ENST00000425835 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.11□□□□□ -1.592e-14■□□□□ 10.3
HDAC2-202ENST00000425835 SRRTQ9BXP5 876 aaKnown RBP5.11□□□□□ -1.59
HDAC2-202ENST00000425835 PCMTD2Q9NV79 361 aa5.11□□□□□ -1.59
HDAC2-202ENST00000425835 CEP131Q9UPN4 1083 aa5.11□□□□□ -1.59
HDAC2-202ENST00000425835 MRVI1Q9Y6F6 885 aa5.11□□□□□ -1.59
HDAC2-202ENST00000425835 MEIS3P2A8K0S8 358 aa5.1□□□□□ -1.59
HDAC2-202ENST00000425835 RGS13O14921 159 aa5.1□□□□□ -1.59
HDAC2-202ENST00000425835 SSBP05455 408 aaKnown RBP eCLIP5.1□□□□□ -1.59
HDAC2-202ENST00000425835 CEACAM5P06731 702 aa5.1□□□□□ -1.59
HDAC2-202ENST00000425835 NME1P15531 152 aaKnown RBP5.1□□□□□ -1.59
HDAC2-202ENST00000425835 ATF4P18848 351 aaPredicted RBP5.1□□□□□ -1.59
HDAC2-202ENST00000425835 CYP7A1P22680 504 aa5.1□□□□□ -1.59
HDAC2-202ENST00000425835 OXCT1P55809 520 aa5.1□□□□□ -1.59
HDAC2-202ENST00000425835 ARID5AQ03989 594 aa5.1□□□□□ -1.59
HDAC2-202ENST00000425835 CDKAL1Q5VV42 579 aa5.1□□□□□ -1.59
HDAC2-202ENST00000425835 INTS5Q6P9B9 1019 aaKnown RBP5.1□□□□□ -1.59
HDAC2-202ENST00000425835 FAM214BQ7L5A3 538 aa5.1□□□□□ -1.59
HDAC2-202ENST00000425835 SEC16BQ96JE7 1060 aa5.1□□□□□ -1.59
HDAC2-202ENST00000425835 ZNF512BQ96KM6 892 aaPredicted RBP5.1□□□□□ -1.59
HDAC2-202ENST00000425835 CNNM2Q9H8M5 875 aa5.1□□□□□ -1.59
HDAC2-202ENST00000425835 MAPK8IP1Q9UQF2 711 aa5.1□□□□□ -1.59
HDAC2-202ENST00000425835 LRRN2O75325 713 aa5.09□□□□□ -1.59
HDAC2-202ENST00000425835 UBOX5O94941 541 aa5.09□□□□□ -1.59
HDAC2-202ENST00000425835 CD97P48960 835 aa5.09□□□□□ -1.59
HDAC2-202ENST00000425835 PPP2R5EQ16537 467 aa5.09□□□□□ -1.59
HDAC2-202ENST00000425835 LCE1DQ5T752 114 aa5.09□□□□□ -1.59
HDAC2-202ENST00000425835 CDCP2Q5VXM1 449 aa5.09□□□□□ -1.59
HDAC2-202ENST00000425835 MFSD4AQ8N468 514 aa5.09□□□□□ -1.59
HDAC2-202ENST00000425835 NETO1Q8TDF5 533 aa5.09□□□□□ -1.59
HDAC2-202ENST00000425835 KREMEN1Q96MU8 473 aa5.09□□□□□ -1.59
HDAC2-202ENST00000425835 SLC9A7Q96T83 725 aa5.09□□□□□ -1.59
HDAC2-202ENST00000425835 FAM86C1Q9NVL1 165 aa5.09□□□□□ -1.59
HDAC2-202ENST00000425835 PLAGL2Q9UPG8 496 aa5.09□□□□□ -1.59
HDAC2-202ENST00000425835 IGF2BP3O00425 579 aaKnown RBP eCLIP5.08□□□□□ -1.6
HDAC2-202ENST00000425835 CLEC3AO75596 197 aa5.08□□□□□ -1.6
HDAC2-202ENST00000425835 ACRP10323 421 aa5.08□□□□□ -1.6
HDAC2-202ENST00000425835 LRP8Q14114 963 aa5.08□□□□□ -1.6
HDAC2-202ENST00000425835 ZYXQ15942 572 aaKnown RBP5.08□□□□□ -1.6
HDAC2-202ENST00000425835 IFI16Q16666 785 aaKnown RBP5.08□□□□□ -1.6
HDAC2-202ENST00000425835 MSMPQ1L6U9 139 aa5.08□□□□□ -1.6
HDAC2-202ENST00000425835 SHDQ96IW2 340 aa5.08□□□□□ -1.6
HDAC2-202ENST00000425835 SLC6A18Q96N87 628 aa5.08□□□□□ -1.6
HDAC2-202ENST00000425835 TM9SF2Q99805 663 aa5.08□□□□□ -1.6
HDAC2-202ENST00000425835 CAPN6Q9Y6Q1 641 aa5.08□□□□□ -1.6
HDAC2-202ENST00000425835 H3BS24 57 aa5.07□□□□□ -1.6
HDAC2-202ENST00000425835 TNFRSF10CO14798 259 aa5.07□□□□□ -1.6
HDAC2-202ENST00000425835 HYAL3O43820 417 aaPredicted RBP5.07□□□□□ -1.6
HDAC2-202ENST00000425835 GUCY2CP25092 1073 aa5.07□□□□□ -1.6
HDAC2-202ENST00000425835 CD96P40200 585 aa5.07□□□□□ -1.6
HDAC2-202ENST00000425835 GIPRP48546 466 aa5.07□□□□□ -1.6
HDAC2-202ENST00000425835 BNIP3Q12983 259 aa5.07□□□□□ -1.6
HDAC2-202ENST00000425835 NKPD1Q17RQ9 610 aa5.07□□□□□ -1.6
HDAC2-202ENST00000425835 TDRD10Q5VZ19 366 aaKnown RBP5.07□□□□□ -1.6
HDAC2-202ENST00000425835 MCF2L2Q86YR7 1114 aa5.07□□□□□ -1.6
HDAC2-202ENST00000425835 SPACA3Q8IXA5 215 aa5.07□□□□□ -1.6
HDAC2-202ENST00000425835 TMEM192Q8IY95 271 aa5.07□□□□□ -1.6
HDAC2-202ENST00000425835 RBBP8NLQ8NC74 664 aaPredicted RBP5.07□□□□□ -1.6
HDAC2-202ENST00000425835 RNF141Q8WVD5 230 aa5.07□□□□□ -1.6
HDAC2-202ENST00000425835 MKRN2Q9H000 416 aaKnown RBP5.07□□□□□ -1.6
HDAC2-202ENST00000425835 BSDC1Q9NW68 430 aaPredicted RBP5.07□□□□□ -1.6
HDAC2-202ENST00000425835 STRIP2Q9ULQ0 834 aa5.07□□□□□ -1.6
HDAC2-202ENST00000425835 ANGEL1Q9UNK9 670 aaKnown RBP5.07□□□□□ -1.6
HDAC2-202ENST00000425835 TMEM265A0A087WTH1 108 aa5.06□□□□□ -1.6
HDAC2-202ENST00000425835 FGRP09769 529 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms