RNA–Protein interactions for RNA: ENST00000425443.6

COL12A1-205, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 3,135 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-205ENST00000425443 ZPR1O75312 459 aa14.82□□□□□ -0.04
COL12A1-205ENST00000425443 MMP1P03956 469 aa14.82□□□□□ -0.04
COL12A1-205ENST00000425443 CLCN6P51797 869 aa14.82□□□□□ -0.04
COL12A1-205ENST00000425443 MDM2Q00987 491 aaPredicted RBP14.82□□□□□ -0.04
COL12A1-205ENST00000425443 FMR1Q06787 632 aaKnown RBP eCLIP14.82□□□□□ -0.04
COL12A1-205ENST00000425443 TERF2Q15554 542 aa14.82□□□□□ -0.04
COL12A1-205ENST00000425443 CELF1Q92879 486 aaKnown RBP14.82□□□□□ -0.04
COL12A1-205ENST00000425443 TIGD1Q96MW7 591 aa14.82□□□□□ -0.04
COL12A1-205ENST00000425443 FHOD1Q9Y613 1164 aa14.82□□□□□ -0.04
COL12A1-205ENST00000425443 RTL9Q8NET4 1388 aa14.82□□□□□ -0.04
COL12A1-205ENST00000425443 CYP2D7A0A087X1C5 515 aa14.81□□□□□ -0.04
COL12A1-205ENST00000425443 POLR2DO15514 142 aaKnown RBP14.81□□□□□ -0.04
COL12A1-205ENST00000425443 NRDCO43847 1150 aa14.81□□□□□ -0.04
COL12A1-205ENST00000425443 CT47A1Q5JQC4 288 aaPredicted RBP14.81□□□□□ -0.04
COL12A1-205ENST00000425443 IFIT1BQ5T764 474 aaKnown RBP14.81□□□□□ -0.04
COL12A1-205ENST00000425443 CREBRFQ8IUR6 639 aa14.81□□□□□ -0.04
COL12A1-205ENST00000425443 VSTM4Q8IW00 320 aa14.81□□□□□ -0.04
COL12A1-205ENST00000425443 C8orf37Q96NL8 207 aa14.81□□□□□ -0.04
COL12A1-205ENST00000425443 ETF1P62495 437 aaKnown RBP14.81□□□□□ -0.04
COL12A1-205ENST00000425443 KLHL10Q6JEL2 608 aa14.81□□□□□ -0.04
COL12A1-205ENST00000425443 KRBA2Q6ZNG9 492 aa14.81□□□□□ -0.04
COL12A1-205ENST00000425443 CATIPQ7Z7H3 387 aa14.81□□□□□ -0.04
COL12A1-205ENST00000425443 CRACR2BQ8N4Y2 399 aaPredicted RBP14.81□□□□□ -0.04
COL12A1-205ENST00000425443 GPATCH11Q8N954 259 aa14.81□□□□□ -0.04
COL12A1-205ENST00000425443 OXER1Q8TDS5 423 aa14.81□□□□□ -0.04
COL12A1-205ENST00000425443 TFCP2L1Q9NZI6 479 aa14.81□□□□□ -0.04
COL12A1-205ENST00000425443 FAM237AA0A1B0GTK4 181 aa14.81□□□□□ -0.04
COL12A1-205ENST00000425443 CASP1P29466 404 aa14.81□□□□□ -0.04
COL12A1-205ENST00000425443 TBC1D9BQ66K14 1250 aa14.81□□□□□ -0.04
COL12A1-205ENST00000425443 USP49Q70CQ1 688 aa14.81□□□□□ -0.04
COL12A1-205ENST00000425443 MYH14Q7Z406 1995 aaKnown RBP14.81□□□□□ -0.04
COL12A1-205ENST00000425443 VWA3AA6NCI4 1184 aa14.8□□□□□ -0.04
COL12A1-205ENST00000425443 FAM205CA6NFA0 338 aa14.8□□□□□ -0.04
COL12A1-205ENST00000425443 COBLO75128 1261 aa14.8□□□□□ -0.04
COL12A1-205ENST00000425443 ARHGAP29Q52LW3 1261 aa14.8□□□□□ -0.04
COL12A1-205ENST00000425443 RILPL1Q5EBL4 403 aa14.8□□□□□ -0.04
COL12A1-205ENST00000425443 BARGINQ6ZT62 677 aa14.8□□□□□ -0.04
COL12A1-205ENST00000425443 CABP5Q9NP86 173 aa14.8□□□□□ -0.04
COL12A1-205ENST00000425443 JAG2Q9Y219 1238 aa14.8□□□□□ -0.04
COL12A1-205ENST00000425443 ZBTB12Q9Y330 459 aaPredicted RBP14.8□□□□□ -0.04
COL12A1-205ENST00000425443 PLCH1Q4KWH8 1693 aa14.8□□□□□ -0.04
COL12A1-205ENST00000425443 KCNJ6P48051 423 aa14.8□□□□□ -0.04
COL12A1-205ENST00000425443 RPS8P62241 208 aaKnown RBP14.8□□□□□ -0.04
COL12A1-205ENST00000425443 GABPB1Q06547 395 aaPredicted RBP14.8□□□□□ -0.04
COL12A1-205ENST00000425443 SF3B3Q15393 1217 aaKnown RBP14.8□□□□□ -0.04
COL12A1-205ENST00000425443 FAM84BQ96KN1 310 aaPredicted RBP14.8□□□□□ -0.04
COL12A1-205ENST00000425443 PCDHB6Q9Y5E3 794 aa14.8□□□□□ -0.04
COL12A1-205ENST00000425443 SHISA4Q96DD7 197 aa14.79□□□□□ -0.04
COL12A1-205ENST00000425443 ZSCAN10Q96SZ4 725 aaPredicted RBP14.79□□□□□ -0.04
COL12A1-205ENST00000425443 PARP3Q9Y6F1 533 aa14.79□□□□□ -0.04
COL12A1-205ENST00000425443 KIF2AO00139 706 aaPredicted RBP14.79□□□□□ -0.04
COL12A1-205ENST00000425443 GNPATO15228 680 aa14.79□□□□□ -0.04
COL12A1-205ENST00000425443 TOP1P11387 765 aaKnown RBP14.79□□□□□ -0.04
COL12A1-205ENST00000425443 AFMP43652 599 aa14.79□□□□□ -0.04
COL12A1-205ENST00000425443 TOGARAM2Q6ZUX3 1019 aa14.79□□□□□ -0.04
COL12A1-205ENST00000425443 STAMQ92783 540 aa14.79□□□□□ -0.04
COL12A1-205ENST00000425443 WDR24Q96S15 920 aa14.79□□□□□ -0.04
COL12A1-205ENST00000425443 NYXQ9GZU5 481 aa14.79□□□□□ -0.04
COL12A1-205ENST00000425443 AATFQ9NY61 560 aaKnown RBP eCLIP14.79□□□□□ -0.04
COL12A1-205ENST00000425443 SRP68Q9UHB9 627 aaKnown RBP14.79□□□□□ -0.04
COL12A1-205ENST00000425443 SERTAD1Q9UHV2 236 aa14.79□□□□□ -0.04
COL12A1-205ENST00000425443 CEP131Q9UPN4 1083 aa14.79□□□□□ -0.04
COL12A1-205ENST00000425443 LRP5O75197 1615 aa14.79□□□□□ -0.04
COL12A1-205ENST00000425443 USP17L12C9JPN9 530 aa14.79□□□□□ -0.04
COL12A1-205ENST00000425443 USP17L21D6R901 530 aa14.79□□□□□ -0.04
COL12A1-205ENST00000425443 SEC31AO94979 1220 aaKnown RBP14.79□□□□□ -0.04
COL12A1-205ENST00000425443 ADKP55263 362 aaKnown RBP14.79□□□□□ -0.04
COL12A1-205ENST00000425443 STX17P56962 302 aa14.79□□□□□ -0.04
COL12A1-205ENST00000425443 FOXP1Q9H334 677 aaPredicted RBP14.79□□□□□ -0.04
COL12A1-205ENST00000425443 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.79□□□□□ -0.04
COL12A1-205ENST00000425443 VPS54Q9P1Q0 977 aa14.79□□□□□ -0.04
COL12A1-205ENST00000425443 MAN1B1Q9UKM7 699 aa14.79□□□□□ -0.04
COL12A1-205ENST00000425443 MTMR7Q9Y216 660 aa14.79□□□□□ -0.04
COL12A1-205ENST00000425443 A0A0U1RQJ8 604 aa14.78□□□□□ -0.04
COL12A1-205ENST00000425443 HIBADHP31937 336 aaKnown RBP14.78□□□□□ -0.04
COL12A1-205ENST00000425443 ATRIPQ8WXE1 791 aa14.78□□□□□ -0.04
COL12A1-205ENST00000425443 V9GY48 417 aaPredicted RBP14.78□□□□□ -0.04
COL12A1-205ENST00000425443 CHD4Q14839 1912 aa14.78□□□□□ -0.04
COL12A1-205ENST00000425443 TPTE2Q6XPS3 522 aa14.78□□□□□ -0.04
COL12A1-205ENST00000425443 CPLX3Q8WVH0 158 aa14.78□□□□□ -0.04
COL12A1-205ENST00000425443 MTA3Q9BTC8 594 aa14.78□□□□□ -0.04
COL12A1-205ENST00000425443 CARD6Q9BX69 1037 aa14.78□□□□□ -0.04
COL12A1-205ENST00000425443 ZNF804BA4D1E1 1349 aa14.78□□□□□ -0.04
COL12A1-205ENST00000425443 URI1O94763 535 aaPredicted RBP14.77□□□□□ -0.04
COL12A1-205ENST00000425443 PLA2G4AP47712 749 aa14.77□□□□□ -0.04
COL12A1-205ENST00000425443 AHDC1Q5TGY3 1603 aaPredicted RBP14.77□□□□□ -0.04
COL12A1-205ENST00000425443 PHLPP2Q6ZVD8 1323 aa14.77□□□□□ -0.04
COL12A1-205ENST00000425443 ENAHQ8N8S7 591 aaPredicted RBP14.77□□□□□ -0.04
COL12A1-205ENST00000425443 RIOK1Q9BRS2 568 aaKnown RBP14.77□□□□□ -0.04
COL12A1-205ENST00000425443 CRNKL1Q9BZJ0 848 aaKnown RBP14.77□□□□□ -0.04
COL12A1-205ENST00000425443 BRMS1Q9HCU9 246 aa14.77□□□□□ -0.04
COL12A1-205ENST00000425443 FBXO2Q9UK22 296 aaPredicted RBP14.77□□□□□ -0.04
COL12A1-205ENST00000425443 KLRK1P26718 216 aa14.77□□□□□ -0.05
COL12A1-205ENST00000425443 TBX2Q13207 712 aaPredicted RBP14.77□□□□□ -0.05
COL12A1-205ENST00000425443 DHX58Q96C10 678 aa14.77□□□□□ -0.05
COL12A1-205ENST00000425443 DESI2Q9BSY9 194 aa14.77□□□□□ -0.05
COL12A1-205ENST00000425443 YY1AP1Q9H869 796 aa14.77□□□□□ -0.05
COL12A1-205ENST00000425443 SAMSN1Q9NSI8 373 aaKnown RBP14.77□□□□□ -0.05
COL12A1-205ENST00000425443 PPP2R2CQ9Y2T4 447 aa14.77□□□□□ -0.05
COL12A1-205ENST00000425443 MTF1Q14872 753 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms