RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 IMMTQ16891 758 aaKnown RBP18.38■□□□□ 0.53
SHOX2-202ENST00000425436 TBC1D10CQ8IV04 446 aa18.38■□□□□ 0.53
SHOX2-202ENST00000425436 TNPO1Q92973 898 aaKnown RBP18.38■□□□□ 0.53
SHOX2-202ENST00000425436 CCDC102AQ96A19 550 aa18.38■□□□□ 0.53
SHOX2-202ENST00000425436 WNK4Q96J92 1243 aa18.38■□□□□ 0.53
SHOX2-202ENST00000425436 SH2B1Q9NRF2 756 aaPredicted RBP18.38■□□□□ 0.53
SHOX2-202ENST00000425436 FOXD4L1Q9NU39 408 aa18.38■□□□□ 0.53
SHOX2-202ENST00000425436 PDRG1Q9NUG6 133 aa18.38■□□□□ 0.53
SHOX2-202ENST00000425436 ZHX2Q9Y6X8 837 aa18.38■□□□□ 0.53
SHOX2-202ENST00000425436 GOLGA6L22H0YM25 854 aa18.37■□□□□ 0.53
SHOX2-202ENST00000425436 SLC10A3P09131 477 aa18.37■□□□□ 0.53
SHOX2-202ENST00000425436 RASA1P20936 1047 aa18.37■□□□□ 0.53
SHOX2-202ENST00000425436 RRP12Q5JTH9 1297 aaKnown RBP18.37■□□□□ 0.53
SHOX2-202ENST00000425436 SPRYD7Q5W111 196 aa18.37■□□□□ 0.53
SHOX2-202ENST00000425436 ERO1BQ86YB8 467 aa18.37■□□□□ 0.53
SHOX2-202ENST00000425436 ZNF444Q8N0Y2 327 aaPredicted RBP18.37■□□□□ 0.53
SHOX2-202ENST00000425436 ZIC5Q96T25 663 aa18.37■□□□□ 0.53
SHOX2-202ENST00000425436 TOMM22Q9NS69 142 aa18.37■□□□□ 0.53
SHOX2-202ENST00000425436 ZBTB21Q9ULJ3 1066 aa18.37■□□□□ 0.53
SHOX2-202ENST00000425436 TAF6LQ9Y6J9 622 aa18.37■□□□□ 0.53
SHOX2-202ENST00000425436 WDR33Q9C0J8 1336 aaKnown RBP18.37■□□□□ 0.53
SHOX2-202ENST00000425436 SPDYE5A6NIY4 337 aa18.36■□□□□ 0.53
SHOX2-202ENST00000425436 CYP21A2P08686 494 aa18.36■□□□□ 0.53
SHOX2-202ENST00000425436 HMGB1P09429 215 aaKnown RBP18.36■□□□□ 0.53
SHOX2-202ENST00000425436 PDIA4P13667 645 aaKnown RBP18.36■□□□□ 0.53
SHOX2-202ENST00000425436 FAM47AQ5JRC9 791 aa18.36■□□□□ 0.53
SHOX2-202ENST00000425436 DNAJC5GQ8N7S2 189 aa18.36■□□□□ 0.53
SHOX2-202ENST00000425436 NKX2-3Q8TAU0 364 aa18.36■□□□□ 0.53
SHOX2-202ENST00000425436 CABP5Q9NP86 173 aa18.36■□□□□ 0.53
SHOX2-202ENST00000425436 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.36■□□□□ 0.53
SHOX2-202ENST00000425436 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.36■□□□□ 0.53
SHOX2-202ENST00000425436 LAMA4Q16363 1823 aa18.35■□□□□ 0.53
SHOX2-202ENST00000425436 IRF6O14896 467 aa18.35■□□□□ 0.53
SHOX2-202ENST00000425436 ASNSP08243 561 aa18.35■□□□□ 0.53
SHOX2-202ENST00000425436 GUCY1A2P33402 732 aa18.35■□□□□ 0.53
SHOX2-202ENST00000425436 ECE1P42892 770 aa18.35■□□□□ 0.53
SHOX2-202ENST00000425436 SEPT2Q15019 361 aa18.35■□□□□ 0.53
SHOX2-202ENST00000425436 AKNAD1Q5T1N1 836 aa18.35■□□□□ 0.53
SHOX2-202ENST00000425436 MFSD6Q6ZSS7 791 aa18.35■□□□□ 0.53
SHOX2-202ENST00000425436 ZNF287Q9HBT7 754 aa18.35■□□□□ 0.53
SHOX2-202ENST00000425436 TAOK2Q9UL54 1235 aa18.35■□□□□ 0.53
SHOX2-202ENST00000425436 USP17L5A8MUK1 530 aa18.34■□□□□ 0.53
SHOX2-202ENST00000425436 RANBP6O60518 1105 aaKnown RBP18.34■□□□□ 0.53
SHOX2-202ENST00000425436 AK2P54819 239 aa18.34■□□□□ 0.53
SHOX2-202ENST00000425436 TFAP4Q01664 338 aa18.34■□□□□ 0.53
SHOX2-202ENST00000425436 PPATQ06203 517 aa18.34■□□□□ 0.53
SHOX2-202ENST00000425436 BLOC1S2Q6QNY1 142 aa18.34■□□□□ 0.53
SHOX2-202ENST00000425436 CLEC10AQ8IUN9 316 aa18.34■□□□□ 0.53
SHOX2-202ENST00000425436 CCDC17Q96LX7 622 aa18.34■□□□□ 0.53
SHOX2-202ENST00000425436 PHIPQ8WWQ0 1821 aa18.34■□□□□ 0.53
SHOX2-202ENST00000425436 FGRP09769 529 aa18.33■□□□□ 0.53
SHOX2-202ENST00000425436 KIF23Q02241 960 aaPredicted RBP18.33■□□□□ 0.53
SHOX2-202ENST00000425436 SKOR2Q2VWA4 1001 aaPredicted RBP18.33■□□□□ 0.53
SHOX2-202ENST00000425436 STAG1Q8WVM7 1258 aa18.33■□□□□ 0.53
SHOX2-202ENST00000425436 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.33■□□□□ 0.53
SHOX2-202ENST00000425436 AFG3L2Q9Y4W6 797 aa18.33■□□□□ 0.53
SHOX2-202ENST00000425436 NEDD4P46934 1319 aa18.33■□□□□ 0.52
SHOX2-202ENST00000425436 TRIM75PA6NK02 468 aa18.33■□□□□ 0.52
SHOX2-202ENST00000425436 SPP2Q13103 211 aa18.33■□□□□ 0.52
SHOX2-202ENST00000425436 PPIL2Q13356 520 aa18.33■□□□□ 0.52
SHOX2-202ENST00000425436 TMEM179Q6ZVK1 233 aa18.33■□□□□ 0.52
SHOX2-202ENST00000425436 TSPY2A6NKD2 308 aa18.32■□□□□ 0.52
SHOX2-202ENST00000425436 ORC4O43929 436 aa18.32■□□□□ 0.52
SHOX2-202ENST00000425436 TSPY3P0CV98 308 aa18.32■□□□□ 0.52
SHOX2-202ENST00000425436 TSPY8P0CW00 308 aa18.32■□□□□ 0.52
SHOX2-202ENST00000425436 ZBTB48P10074 688 aaPredicted RBP18.32■□□□□ 0.52
SHOX2-202ENST00000425436 GSE1Q14687 1217 aa18.32■□□□□ 0.52
SHOX2-202ENST00000425436 ADCK5Q3MIX3 580 aa18.32■□□□□ 0.52
SHOX2-202ENST00000425436 RNF41Q9H4P4 317 aaPredicted RBP18.32■□□□□ 0.52
SHOX2-202ENST00000425436 GINM1Q9NU53 330 aa18.32■□□□□ 0.52
SHOX2-202ENST00000425436 B4E1Z4 1266 aa18.31■□□□□ 0.52
SHOX2-202ENST00000425436 E7EWF7 191 aa18.31■□□□□ 0.52
SHOX2-202ENST00000425436 NMT2O60551 498 aa18.31■□□□□ 0.52
SHOX2-202ENST00000425436 RPS6KB1P23443 525 aa18.31■□□□□ 0.52
SHOX2-202ENST00000425436 ATP2B2Q01814 1243 aa18.31■□□□□ 0.52
SHOX2-202ENST00000425436 NOGQ13253 232 aa18.31■□□□□ 0.52
SHOX2-202ENST00000425436 DGKZQ13574 1117 aa18.31■□□□□ 0.52
SHOX2-202ENST00000425436 PPP4R3CPQ6ZMV5 832 aa18.31■□□□□ 0.52
SHOX2-202ENST00000425436 STOX1Q6ZVD7 989 aa18.31■□□□□ 0.52
SHOX2-202ENST00000425436 SIAH1Q8IUQ4 282 aa18.31■□□□□ 0.52
SHOX2-202ENST00000425436 ZNF280CQ8ND82 737 aa18.31■□□□□ 0.52
SHOX2-202ENST00000425436 ACER1Q8TDN7 264 aa18.31■□□□□ 0.52
SHOX2-202ENST00000425436 NEK1Q96PY6 1258 aa18.31■□□□□ 0.52
SHOX2-202ENST00000425436 NEDD1Q8NHV4 660 aa18.3■□□□□ 0.52
SHOX2-202ENST00000425436 CHMP4CQ96CF2 233 aa18.3■□□□□ 0.52
SHOX2-202ENST00000425436 MS4A4AQ96JQ5 239 aa18.3■□□□□ 0.52
SHOX2-202ENST00000425436 AS3MTQ9HBK9 375 aa18.3■□□□□ 0.52
SHOX2-202ENST00000425436 A0A1W2PRG0 241 aa18.29■□□□□ 0.52
SHOX2-202ENST00000425436 KDM4AO75164 1064 aa18.29■□□□□ 0.52
SHOX2-202ENST00000425436 PCP11498 1178 aaKnown RBP18.29■□□□□ 0.52
SHOX2-202ENST00000425436 ZYXQ15942 572 aaKnown RBP18.29■□□□□ 0.52
SHOX2-202ENST00000425436 ZKSCAN3Q9BRR0 538 aa18.29■□□□□ 0.52
SHOX2-202ENST00000425436 WDR18Q9BV38 432 aa18.29■□□□□ 0.52
SHOX2-202ENST00000425436 IL17RBQ9NRM6 502 aa18.29■□□□□ 0.52
SHOX2-202ENST00000425436 KCNH4Q9UQ05 1017 aa18.29■□□□□ 0.52
SHOX2-202ENST00000425436 CXCL11O14625 94 aa18.28■□□□□ 0.52
SHOX2-202ENST00000425436 EEF2P13639 858 aaKnown RBP18.28■□□□□ 0.52
SHOX2-202ENST00000425436 MAP2K2P36507 400 aa18.28■□□□□ 0.52
SHOX2-202ENST00000425436 GTF2A2P52657 109 aa18.28■□□□□ 0.52
SHOX2-202ENST00000425436 ICA1Q05084 483 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms