RNA–Protein interactions for RNA: ENST00000425244.6

CUX1-205, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-205ENST00000425244 DPEP1P16444 411 aa12.26□□□□□ -0.45
CUX1-205ENST00000425244 DIXDC1Q155Q3 683 aa12.26□□□□□ -0.45
CUX1-205ENST00000425244 CEP135Q66GS9 1140 aa12.26□□□□□ -0.45
CUX1-205ENST00000425244 NBPF11Q86T75 865 aa12.26□□□□□ -0.45
CUX1-205ENST00000425244 ZNF384Q8TF68 577 aa12.26□□□□□ -0.45
CUX1-205ENST00000425244 SLC16A10Q8TF71 515 aa12.26□□□□□ -0.45
CUX1-205ENST00000425244 MAP3K14Q99558 947 aa12.26□□□□□ -0.45
CUX1-205ENST00000425244 FMNL1O95466 1100 aaPredicted RBP12.25□□□□□ -0.45
CUX1-205ENST00000425244 U2AF2P26368 475 aaKnown RBP eCLIP12.25□□□□□ -0.451e-7■■■■■ 27.9
CUX1-205ENST00000425244 POLD1P28340 1107 aa12.25□□□□□ -0.45
CUX1-205ENST00000425244 CCZ1BP86790 482 aa12.25□□□□□ -0.45
CUX1-205ENST00000425244 CCZ1P86791 482 aaPredicted RBP12.25□□□□□ -0.45
CUX1-205ENST00000425244 DHX37Q8IY37 1157 aaKnown RBP12.25□□□□□ -0.45
CUX1-205ENST00000425244 DIS3L2Q8IYB7 885 aaKnown RBP12.25□□□□□ -0.45
CUX1-205ENST00000425244 CCDC112Q8NEF3 446 aa12.25□□□□□ -0.45
CUX1-205ENST00000425244 CNKSR1Q969H4 720 aa12.25□□□□□ -0.45
CUX1-205ENST00000425244 UBAC1Q9BSL1 405 aa12.25□□□□□ -0.45
CUX1-205ENST00000425244 MXD3Q9BW11 206 aa12.25□□□□□ -0.45
CUX1-205ENST00000425244 MAGEB6P1A0A0J9YX57 407 aa12.25□□□□□ -0.45
CUX1-205ENST00000425244 SMTNL1A8MU46 457 aa12.25□□□□□ -0.45
CUX1-205ENST00000425244 SMIM22K7EJ46 135 aa12.25□□□□□ -0.45
CUX1-205ENST00000425244 SEMA3EO15041 775 aa12.25□□□□□ -0.45
CUX1-205ENST00000425244 PPP6R2O75170 966 aa12.25□□□□□ -0.45
CUX1-205ENST00000425244 LDHBP07195 334 aaKnown RBP12.25□□□□□ -0.45
CUX1-205ENST00000425244 ATP1A3P13637 1013 aa12.25□□□□□ -0.45
CUX1-205ENST00000425244 GNAT2P19087 354 aa12.25□□□□□ -0.45
CUX1-205ENST00000425244 STYK1Q6J9G0 422 aa12.25□□□□□ -0.45
CUX1-205ENST00000425244 TMC4Q7Z404 712 aa12.25□□□□□ -0.45
CUX1-205ENST00000425244 NOSTRINQ8IVI9 506 aa12.25□□□□□ -0.45
CUX1-205ENST00000425244 CNNM3Q8NE01 707 aa12.25□□□□□ -0.45
CUX1-205ENST00000425244 WASF1Q92558 559 aa12.25□□□□□ -0.45
CUX1-205ENST00000425244 IFNAR1P17181 557 aa12.24□□□□□ -0.45
CUX1-205ENST00000425244 GSDMDP57764 484 aa12.24□□□□□ -0.45
CUX1-205ENST00000425244 PTPN14Q15678 1187 aa12.24□□□□□ -0.45
CUX1-205ENST00000425244 LONRF3Q496Y0 759 aa12.24□□□□□ -0.45
CUX1-205ENST00000425244 MFSD14BQ5SR56 506 aa12.24□□□□□ -0.45
CUX1-205ENST00000425244 STAG1Q8WVM7 1258 aa12.24□□□□□ -0.45
CUX1-205ENST00000425244 NSUN4Q96CB9 384 aaKnown RBP12.24□□□□□ -0.45
CUX1-205ENST00000425244 BPIFA3Q9BQP9 254 aa12.24□□□□□ -0.45
CUX1-205ENST00000425244 KCNQ5Q9NR82 932 aa12.24□□□□□ -0.45
CUX1-205ENST00000425244 KCNH3Q9ULD8 1083 aa12.24□□□□□ -0.45
CUX1-205ENST00000425244 PPARAQ07869 468 aa12.24□□□□□ -0.45
CUX1-205ENST00000425244 NCAPHQ15003 741 aa12.24□□□□□ -0.45
CUX1-205ENST00000425244 RESP18Q5W5W9 173 aa12.24□□□□□ -0.45
CUX1-205ENST00000425244 MTFR1LQ9H019 292 aa12.24□□□□□ -0.45
CUX1-205ENST00000425244 HPSEQ9Y251 543 aa12.24□□□□□ -0.45
CUX1-205ENST00000425244 MMP1P03956 469 aa12.24□□□□□ -0.45
CUX1-205ENST00000425244 NR5A1Q13285 461 aa12.24□□□□□ -0.45
CUX1-205ENST00000425244 PTPN21Q16825 1174 aa12.24□□□□□ -0.45
CUX1-205ENST00000425244 PPP4R3BQ5MIZ7 849 aa12.24□□□□□ -0.45
CUX1-205ENST00000425244 PDCL2Q8N4E4 241 aa12.24□□□□□ -0.45
CUX1-205ENST00000425244 TTLL6Q8N841 843 aa12.24□□□□□ -0.45
CUX1-205ENST00000425244 KRI1Q8N9T8 703 aaKnown RBP12.24□□□□□ -0.45
CUX1-205ENST00000425244 WDR66Q8TBY9 1149 aa12.24□□□□□ -0.45
CUX1-205ENST00000425244 hCG_1642624A0A1W2PR95 340 aa12.23□□□□□ -0.45
CUX1-205ENST00000425244 FOXN1O15353 648 aa12.23□□□□□ -0.45
CUX1-205ENST00000425244 CUTAO60888 179 aa12.23□□□□□ -0.45
CUX1-205ENST00000425244 PRDM1O75626 825 aa12.23□□□□□ -0.45
CUX1-205ENST00000425244 SFPQP23246 707 aaKnown RBP eCLIP12.23□□□□□ -0.451e-6■■■■□ 20.4
CUX1-205ENST00000425244 FANCCQ00597 558 aa12.23□□□□□ -0.45
CUX1-205ENST00000425244 AOC3Q16853 763 aa12.23□□□□□ -0.45
CUX1-205ENST00000425244 HSP90AA4PQ58FG1 418 aa12.23□□□□□ -0.45
CUX1-205ENST00000425244 ZNF654Q8IZM8 581 aa12.23□□□□□ -0.45
CUX1-205ENST00000425244 TIGD1Q96MW7 591 aa12.23□□□□□ -0.45
CUX1-205ENST00000425244 CCDC94Q9BW85 323 aaPredicted RBP12.23□□□□□ -0.45
CUX1-205ENST00000425244 RNF41Q9H4P4 317 aaPredicted RBP12.23□□□□□ -0.45
CUX1-205ENST00000425244 PAXBP1Q9Y5B6 917 aa12.23□□□□□ -0.45
CUX1-205ENST00000425244 STK36Q9NRP7 1315 aa12.23□□□□□ -0.45
CUX1-205ENST00000425244 CYP2D7A0A087X1C5 515 aa12.23□□□□□ -0.45
CUX1-205ENST00000425244 SERPINC1P01008 464 aa12.23□□□□□ -0.45
CUX1-205ENST00000425244 GRIN1Q05586 938 aa12.23□□□□□ -0.45
CUX1-205ENST00000425244 NAA30Q147X3 362 aaPredicted RBP12.23□□□□□ -0.45
CUX1-205ENST00000425244 METTL16Q86W50 562 aaKnown RBP12.23□□□□□ -0.45
CUX1-205ENST00000425244 CCAR2Q8N163 923 aaKnown RBP12.23□□□□□ -0.45
CUX1-205ENST00000425244 ZHX1Q9UKY1 873 aaPredicted RBP12.23□□□□□ -0.45
CUX1-205ENST00000425244 DOCK2Q92608 1830 aa12.22□□□□□ -0.45
CUX1-205ENST00000425244 QSER1Q2KHR3 1735 aa12.22□□□□□ -0.45
CUX1-205ENST00000425244 CTIFO43310 598 aaKnown RBP12.22□□□□□ -0.45
CUX1-205ENST00000425244 TOB1P50616 345 aaPredicted RBP12.22□□□□□ -0.45
CUX1-205ENST00000425244 ARMCX5Q6P1M9 558 aa12.22□□□□□ -0.45
CUX1-205ENST00000425244 KRBA2Q6ZNG9 492 aa12.22□□□□□ -0.45
CUX1-205ENST00000425244 PDILTQ8N807 584 aa12.22□□□□□ -0.45
CUX1-205ENST00000425244 FANCBQ8NB91 859 aa12.22□□□□□ -0.45
CUX1-205ENST00000425244 OSBPL5Q9H0X9 879 aaPredicted RBP12.22□□□□□ -0.45
CUX1-205ENST00000425244 PCDHA5Q9Y5H7 936 aa12.22□□□□□ -0.45
CUX1-205ENST00000425244 TNKSO95271 1327 aa12.22□□□□□ -0.45
CUX1-205ENST00000425244 CCDC196A0A1B0GTZ2 297 aa12.22□□□□□ -0.45
CUX1-205ENST00000425244 IL1R1P14778 569 aa12.22□□□□□ -0.45
CUX1-205ENST00000425244 MYL5Q02045 173 aa12.22□□□□□ -0.45
CUX1-205ENST00000425244 CFAP100Q494V2 611 aa12.22□□□□□ -0.45
CUX1-205ENST00000425244 CRACR2BQ8N4Y2 399 aaPredicted RBP12.22□□□□□ -0.45
CUX1-205ENST00000425244 OXER1Q8TDS5 423 aa12.22□□□□□ -0.45
CUX1-205ENST00000425244 IMPACTQ9P2X3 320 aa12.22□□□□□ -0.45
CUX1-205ENST00000425244 TUBE1Q9UJT0 475 aa12.22□□□□□ -0.45
CUX1-205ENST00000425244 DEXIO95424 95 aa12.21□□□□□ -0.45
CUX1-205ENST00000425244 KCNA3P22001 575 aa12.21□□□□□ -0.45
CUX1-205ENST00000425244 AKAP17AQ02040 695 aaKnown RBP12.21□□□□□ -0.45
CUX1-205ENST00000425244 NCBP1Q09161 790 aaKnown RBP12.21□□□□□ -0.45
CUX1-205ENST00000425244 SPTY2D1Q68D10 685 aaPredicted RBP12.21□□□□□ -0.45
CUX1-205ENST00000425244 CCDC150Q8NCX0 1101 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms