RNA–Protein interactions for RNA: ENST00000425049.1

SHANK2-207, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 4

Gene SHANK2, Length 557 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-207ENST00000425049 USP17L22D6RA61 530 aa19.91■□□□□ 0.78
SHANK2-207ENST00000425049 USP17L17D6RBQ6 530 aa19.91■□□□□ 0.78
SHANK2-207ENST00000425049 USP17L19D6RCP7 530 aa19.91■□□□□ 0.78
SHANK2-207ENST00000425049 USP17L20D6RJB6 530 aa19.91■□□□□ 0.78
SHANK2-207ENST00000425049 ZFYP08048 801 aaPredicted RBP19.91■□□□□ 0.78
SHANK2-207ENST00000425049 USP17L24Q0WX57 530 aa19.91■□□□□ 0.78
SHANK2-207ENST00000425049 IRF5Q13568 498 aa19.91■□□□□ 0.78
SHANK2-207ENST00000425049 SEPT2Q15019 361 aa19.91■□□□□ 0.78
SHANK2-207ENST00000425049 MTFR1Q15390 333 aa19.91■□□□□ 0.78
SHANK2-207ENST00000425049 TMEM179Q6ZVK1 233 aa19.91■□□□□ 0.78
SHANK2-207ENST00000425049 RNF208Q9H0X6 261 aa19.91■□□□□ 0.78
SHANK2-207ENST00000425049 CWC22Q9HCG8 908 aaKnown RBP19.91■□□□□ 0.78
SHANK2-207ENST00000425049 MYH7P12883 1935 aa19.91■□□□□ 0.78
SHANK2-207ENST00000425049 CHGBP05060 677 aa19.9■□□□□ 0.78
SHANK2-207ENST00000425049 CCL5P13501 91 aa19.9■□□□□ 0.78
SHANK2-207ENST00000425049 EVX2Q03828 476 aa19.9■□□□□ 0.78
SHANK2-207ENST00000425049 SLC44A5Q8NCS7 719 aa19.9■□□□□ 0.78
SHANK2-207ENST00000425049 ACER1Q8TDN7 264 aa19.9■□□□□ 0.78
SHANK2-207ENST00000425049 PXYLP1Q8TE99 480 aa19.9■□□□□ 0.78
SHANK2-207ENST00000425049 APPBP2Q92624 585 aa19.9■□□□□ 0.78
SHANK2-207ENST00000425049 DYNLL2Q96FJ2 89 aa19.9■□□□□ 0.78
SHANK2-207ENST00000425049 PAGR1Q9BTK6 254 aa19.9■□□□□ 0.78
SHANK2-207ENST00000425049 PUS7LQ9H0K6 701 aaKnown RBP19.9■□□□□ 0.78
SHANK2-207ENST00000425049 USP17L12C9JPN9 530 aa19.89■□□□□ 0.77
SHANK2-207ENST00000425049 USP17L21D6R901 530 aa19.89■□□□□ 0.77
SHANK2-207ENST00000425049 RNF113AO15541 343 aaKnown RBP19.89■□□□□ 0.77
SHANK2-207ENST00000425049 GLRX3O76003 335 aaKnown RBP19.89■□□□□ 0.77
SHANK2-207ENST00000425049 INHAP05111 366 aa19.89■□□□□ 0.77
SHANK2-207ENST00000425049 ELNP15502 786 aa19.89■□□□□ 0.77
SHANK2-207ENST00000425049 VCAM1P19320 739 aa19.89■□□□□ 0.77
SHANK2-207ENST00000425049 C12orf60Q5U649 245 aa19.89■□□□□ 0.77
SHANK2-207ENST00000425049 SH2D4AQ9H788 454 aa19.89■□□□□ 0.77
SHANK2-207ENST00000425049 ARPP21Q9UBL0 812 aaPredicted RBP19.89■□□□□ 0.77
SHANK2-207ENST00000425049 MX1P20591 662 aa19.88■□□□□ 0.77
SHANK2-207ENST00000425049 MAPK4P31152 587 aa19.88■□□□□ 0.77
SHANK2-207ENST00000425049 ERVK-9P63128 1117 aa19.88■□□□□ 0.77
SHANK2-207ENST00000425049 ERVK-24P63145 666 aa19.88■□□□□ 0.77
SHANK2-207ENST00000425049 SOCS4Q8WXH5 440 aa19.88■□□□□ 0.77
SHANK2-207ENST00000425049 CCDC17Q96LX7 622 aa19.88■□□□□ 0.77
SHANK2-207ENST00000425049 ARHGEF10LQ9HCE6 1279 aa19.88■□□□□ 0.77
SHANK2-207ENST00000425049 CYP2D7A0A087X1C5 515 aa19.87■□□□□ 0.77
SHANK2-207ENST00000425049 GJB1P08034 283 aa19.87■□□□□ 0.77
SHANK2-207ENST00000425049 GUCY1A2P33402 732 aa19.87■□□□□ 0.77
SHANK2-207ENST00000425049 CCNA1P78396 465 aa19.87■□□□□ 0.77
SHANK2-207ENST00000425049 ICA1Q05084 483 aa19.87■□□□□ 0.77
SHANK2-207ENST00000425049 GCC1Q96CN9 775 aa19.87■□□□□ 0.77
SHANK2-207ENST00000425049 FSD1Q9BTV5 496 aa19.87■□□□□ 0.77
SHANK2-207ENST00000425049 RPAP3Q9H6T3 665 aaPredicted RBP19.87■□□□□ 0.77
SHANK2-207ENST00000425049 TXNRD2Q9NNW7 524 aa19.87■□□□□ 0.77
SHANK2-207ENST00000425049 AKR1B1P15121 316 aa19.86■□□□□ 0.77
SHANK2-207ENST00000425049 GNAT2P19087 354 aa19.86■□□□□ 0.77
SHANK2-207ENST00000425049 CDK8P49336 464 aa19.86■□□□□ 0.77
SHANK2-207ENST00000425049 AAMPQ13685 434 aa19.86■□□□□ 0.77
SHANK2-207ENST00000425049 ANKRD45Q5TZF3 282 aa19.86■□□□□ 0.77
SHANK2-207ENST00000425049 CATSPERGQ6ZRH7 1159 aa19.86■□□□□ 0.77
SHANK2-207ENST00000425049 C16orf86Q6ZW13 317 aa19.86■□□□□ 0.77
SHANK2-207ENST00000425049 STRBPQ96SI9 672 aaKnown RBP19.86■□□□□ 0.77
SHANK2-207ENST00000425049 NUDT12Q9BQG2 462 aa19.86■□□□□ 0.77
SHANK2-207ENST00000425049 TANGO6Q9C0B7 1094 aa19.86■□□□□ 0.77
SHANK2-207ENST00000425049 UNC93B1Q9H1C4 597 aa19.86■□□□□ 0.77
SHANK2-207ENST00000425049 RBPJLQ9UBG7 517 aa19.86■□□□□ 0.77
SHANK2-207ENST00000425049 RABGAP1Q9Y3P9 1069 aa19.86■□□□□ 0.77
SHANK2-207ENST00000425049 BRCA2P51587 3418 aa19.86■□□□□ 0.77
SHANK2-207ENST00000425049 BAZ2AQ9UIF9 1905 aaKnown RBP19.85■□□□□ 0.77
SHANK2-207ENST00000425049 GPAA1O43292 621 aa19.85■□□□□ 0.77
SHANK2-207ENST00000425049 HMGCRP04035 888 aa19.85■□□□□ 0.77
SHANK2-207ENST00000425049 APPP05067 770 aa19.85■□□□□ 0.77
SHANK2-207ENST00000425049 GJA8P48165 433 aa19.85■□□□□ 0.77
SHANK2-207ENST00000425049 TDO2P48775 406 aa19.85■□□□□ 0.77
SHANK2-207ENST00000425049 GIMAP6Q6P9H5 292 aa19.85■□□□□ 0.77
SHANK2-207ENST00000425049 CTR9Q6PD62 1173 aa19.85■□□□□ 0.77
SHANK2-207ENST00000425049 OTUD7AQ8TE49 926 aaPredicted RBP19.85■□□□□ 0.77
SHANK2-207ENST00000425049 OSBP2Q969R2 916 aa19.85■□□□□ 0.77
SHANK2-207ENST00000425049 PEX10O60683 326 aa19.84■□□□□ 0.77
SHANK2-207ENST00000425049 ATP2B2Q01814 1243 aa19.84■□□□□ 0.77
SHANK2-207ENST00000425049 HDAC1Q13547 482 aaPredicted RBP19.84■□□□□ 0.77
SHANK2-207ENST00000425049 WDR78Q5VTH9 848 aa19.84■□□□□ 0.77
SHANK2-207ENST00000425049 PI4K2BQ8TCG2 481 aa19.84■□□□□ 0.77
SHANK2-207ENST00000425049 LPAR1Q92633 364 aa19.84■□□□□ 0.77
SHANK2-207ENST00000425049 MYH8P13535 1937 aa19.84■□□□□ 0.77
SHANK2-207ENST00000425049 A0A1W2PRG0 241 aa19.83■□□□□ 0.77
SHANK2-207ENST00000425049 MINDY4BA8MYZ0 360 aa19.83■□□□□ 0.77
SHANK2-207ENST00000425049 U2AF1L4Q8WU68 220 aaKnown RBP19.83■□□□□ 0.77
SHANK2-207ENST00000425049 SHISA4Q96DD7 197 aa19.83■□□□□ 0.77
SHANK2-207ENST00000425049 NACAP1Q9BZK3 213 aa19.83■□□□□ 0.77
SHANK2-207ENST00000425049 MKNK2Q9HBH9 465 aa19.83■□□□□ 0.77
SHANK2-207ENST00000425049 GJD2Q9UKL4 321 aa19.83■□□□□ 0.77
SHANK2-207ENST00000425049 MKI67P46013 3256 aaKnown RBP19.82■□□□□ 0.76
SHANK2-207ENST00000425049 GSG1L2A8MUP6 293 aa19.82■□□□□ 0.76
SHANK2-207ENST00000425049 CYP2B6P20813 491 aa19.82■□□□□ 0.76
SHANK2-207ENST00000425049 SBK1Q52WX2 424 aa19.82■□□□□ 0.76
SHANK2-207ENST00000425049 GPR142Q7Z601 462 aa19.82■□□□□ 0.76
SHANK2-207ENST00000425049 PLEKHH3Q7Z736 793 aa19.82■□□□□ 0.76
SHANK2-207ENST00000425049 CLEC10AQ8IUN9 316 aa19.82■□□□□ 0.76
SHANK2-207ENST00000425049 PORCNQ9H237 461 aa19.82■□□□□ 0.76
SHANK2-207ENST00000425049 KANSL2Q9H9L4 492 aa19.82■□□□□ 0.76
SHANK2-207ENST00000425049 ZNF287Q9HBT7 754 aa19.82■□□□□ 0.76
SHANK2-207ENST00000425049 SPDYE16A6NNV3 312 aaPredicted RBP19.81■□□□□ 0.76
SHANK2-207ENST00000425049 M0R2C6 588 aa19.81■□□□□ 0.76
SHANK2-207ENST00000425049 ZKSCAN1P17029 563 aaPredicted RBP19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms