RNA–Protein interactions for RNA: ENST00000424922.5

CALD1-206, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-206ENST00000424922 DHX16O60231 1041 aaKnown RBP17.47■□□□□ 0.39
CALD1-206ENST00000424922 CSPP1Q1MSJ5 1256 aa17.47■□□□□ 0.39
CALD1-206ENST00000424922 SAMD7Q7Z3H4 446 aa17.47■□□□□ 0.39
CALD1-206ENST00000424922 CRACR2BQ8N4Y2 399 aaPredicted RBP17.47■□□□□ 0.39
CALD1-206ENST00000424922 ANP32BQ92688 251 aaKnown RBP17.47■□□□□ 0.39
CALD1-206ENST00000424922 CHMP4CQ96CF2 233 aa17.47■□□□□ 0.39
CALD1-206ENST00000424922 EHD4Q9H223 541 aa17.47■□□□□ 0.39
CALD1-206ENST00000424922 PTPDC1A2A3K4 754 aa17.47■□□□□ 0.39
CALD1-206ENST00000424922 GOLGA8AA7E2F4 631 aa17.47■□□□□ 0.39
CALD1-206ENST00000424922 CPLX1O14810 134 aa17.47■□□□□ 0.39
CALD1-206ENST00000424922 PDCP20941 246 aa17.47■□□□□ 0.39
CALD1-206ENST00000424922 GPC2Q8N158 579 aa17.47■□□□□ 0.39
CALD1-206ENST00000424922 SMARCC2Q8TAQ2 1214 aa17.47■□□□□ 0.39
CALD1-206ENST00000424922 NUP133Q8WUM0 1156 aa17.47■□□□□ 0.39
CALD1-206ENST00000424922 ATRNL1Q5VV63 1379 aa17.46■□□□□ 0.39
CALD1-206ENST00000424922 CDC27P30260 824 aa17.46■□□□□ 0.39
CALD1-206ENST00000424922 SHMT1P34896 483 aa17.46■□□□□ 0.39
CALD1-206ENST00000424922 ADD1P35611 737 aaKnown RBP17.46■□□□□ 0.39
CALD1-206ENST00000424922 GPR162Q16538 588 aa17.46■□□□□ 0.39
CALD1-206ENST00000424922 TBC1D10BQ4KMP7 808 aaPredicted RBP17.46■□□□□ 0.39
CALD1-206ENST00000424922 RCSD1Q6JBY9 416 aa17.46■□□□□ 0.39
CALD1-206ENST00000424922 TCP11L1Q9NUJ3 509 aa17.46■□□□□ 0.39
CALD1-206ENST00000424922 CNTNAP1P78357 1384 aa17.46■□□□□ 0.39
CALD1-206ENST00000424922 MYH4Q9Y623 1939 aa17.46■□□□□ 0.39
CALD1-206ENST00000424922 COL2A1P02458 1487 aaPredicted RBP17.46■□□□□ 0.39
CALD1-206ENST00000424922 FAM196BA6NMK8 535 aa17.45■□□□□ 0.38
CALD1-206ENST00000424922 CATIPQ7Z7H3 387 aa17.45■□□□□ 0.38
CALD1-206ENST00000424922 NEDD1Q8NHV4 660 aa17.45■□□□□ 0.38
CALD1-206ENST00000424922 FAM151AQ8WW52 585 aa17.45■□□□□ 0.38
CALD1-206ENST00000424922 CSRNP1Q96S65 589 aa17.45■□□□□ 0.38
CALD1-206ENST00000424922 DNAJC18Q9H819 358 aa17.45■□□□□ 0.38
CALD1-206ENST00000424922 TCHHQ07283 1943 aa17.45■□□□□ 0.38
CALD1-206ENST00000424922 POLR2AP24928 1970 aaKnown RBP17.45■□□□□ 0.38
CALD1-206ENST00000424922 BAZ2BQ9UIF8 2168 aaKnown RBP17.45■□□□□ 0.38
CALD1-206ENST00000424922 CCDC178Q5BJE1 867 aa17.45■□□□□ 0.38
CALD1-206ENST00000424922 FKBP1CQ5VVH2 108 aa17.45■□□□□ 0.38
CALD1-206ENST00000424922 C9orf131Q5VYM1 1079 aa17.45■□□□□ 0.38
CALD1-206ENST00000424922 LARP1BQ659C4 914 aaKnown RBP17.45■□□□□ 0.38
CALD1-206ENST00000424922 DGKHQ86XP1 1220 aa17.45■□□□□ 0.38
CALD1-206ENST00000424922 TRIM34Q9BYJ4 488 aa17.45■□□□□ 0.38
CALD1-206ENST00000424922 FAM217BQ9NTX9 383 aaPredicted RBP17.45■□□□□ 0.38
CALD1-206ENST00000424922 GREB1LQ9C091 1923 aaPredicted RBP17.45■□□□□ 0.38
CALD1-206ENST00000424922 H7C1D1 291 aa17.44■□□□□ 0.38
CALD1-206ENST00000424922 AKR1B1P15121 316 aa17.44■□□□□ 0.38
CALD1-206ENST00000424922 FOXP4Q8IVH2 680 aaPredicted RBP17.44■□□□□ 0.38
CALD1-206ENST00000424922 FAM184AQ8NB25 1140 aa17.44■□□□□ 0.38
CALD1-206ENST00000424922 RBSNQ9H1K0 784 aa17.44■□□□□ 0.38
CALD1-206ENST00000424922 STX8Q9UNK0 236 aa17.44■□□□□ 0.38
CALD1-206ENST00000424922 UBE2HP62256 183 aa17.44■□□□□ 0.38
CALD1-206ENST00000424922 HMGN5P82970 282 aaKnown RBP17.44■□□□□ 0.38
CALD1-206ENST00000424922 RTN1Q16799 776 aa17.44■□□□□ 0.38
CALD1-206ENST00000424922 KIF4BQ2VIQ3 1234 aa17.44■□□□□ 0.38
CALD1-206ENST00000424922 FANCBQ8NB91 859 aa17.44■□□□□ 0.38
CALD1-206ENST00000424922 TMEM39BQ9GZU3 492 aa17.44■□□□□ 0.38
CALD1-206ENST00000424922 KAT14Q9H8E8 782 aa17.44■□□□□ 0.38
CALD1-206ENST00000424922 RRAGDQ9NQL2 400 aaPredicted RBP17.44■□□□□ 0.38
CALD1-206ENST00000424922 GPRC5DQ9NZD1 345 aa17.44■□□□□ 0.38
CALD1-206ENST00000424922 SCAF8Q9UPN6 1271 aaKnown RBP17.44■□□□□ 0.38
CALD1-206ENST00000424922 NID2Q14112 1375 aa17.43■□□□□ 0.38
CALD1-206ENST00000424922 GADD45BO75293 160 aaPredicted RBP17.43■□□□□ 0.38
CALD1-206ENST00000424922 RCAN1P53805 252 aa17.43■□□□□ 0.38
CALD1-206ENST00000424922 TROAPQ12815 778 aa17.43■□□□□ 0.38
CALD1-206ENST00000424922 ANKS1AQ92625 1134 aa17.43■□□□□ 0.38
CALD1-206ENST00000424922 CEP95Q96GE4 821 aa17.43■□□□□ 0.38
CALD1-206ENST00000424922 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.43■□□□□ 0.38
CALD1-206ENST00000424922 CNPY2Q9Y2B0 182 aa17.43■□□□□ 0.38
CALD1-206ENST00000424922 ASTN2O75129 1339 aaPredicted RBP17.42■□□□□ 0.38
CALD1-206ENST00000424922 SYCE3A1L190 88 aa17.42■□□□□ 0.38
CALD1-206ENST00000424922 DDNO94850 711 aaPredicted RBP17.42■□□□□ 0.38
CALD1-206ENST00000424922 FAM83AQ86UY5 434 aa17.42■□□□□ 0.38
CALD1-206ENST00000424922 PLIN4Q96Q06 1357 aa17.42■□□□□ 0.38
CALD1-206ENST00000424922 MPHOSPH10O00566 681 aaKnown RBP17.42■□□□□ 0.38
CALD1-206ENST00000424922 DDAH1O94760 285 aa17.42■□□□□ 0.38
CALD1-206ENST00000424922 LETM1O95202 739 aaPredicted RBP17.42■□□□□ 0.38
CALD1-206ENST00000424922 FDPSP14324 419 aaKnown RBP17.42■□□□□ 0.38
CALD1-206ENST00000424922 NTRK3Q16288 839 aa17.42■□□□□ 0.38
CALD1-206ENST00000424922 CPLX2Q6PUV4 134 aaKnown RBP17.42■□□□□ 0.38
CALD1-206ENST00000424922 METTL16Q86W50 562 aaKnown RBP17.42■□□□□ 0.38
CALD1-206ENST00000424922 TRIM44Q96DX7 344 aaPredicted RBP17.42■□□□□ 0.38
CALD1-206ENST00000424922 GDPD2Q9HCC8 539 aa17.42■□□□□ 0.38
CALD1-206ENST00000424922 VPS37CA5D8V6 355 aaPredicted RBP17.41■□□□□ 0.38
CALD1-206ENST00000424922 CDKL5O76039 1030 aa17.41■□□□□ 0.38
CALD1-206ENST00000424922 CALM1P0DP23 149 aa17.41■□□□□ 0.38
CALD1-206ENST00000424922 CALM2P0DP24 149 aa17.41■□□□□ 0.38
CALD1-206ENST00000424922 CALM3P0DP25 149 aa17.41■□□□□ 0.38
CALD1-206ENST00000424922 EPS15P42566 896 aa17.41■□□□□ 0.38
CALD1-206ENST00000424922 CERKLQ49MI3 558 aaPredicted RBP17.41■□□□□ 0.38
CALD1-206ENST00000424922 CDAN1Q8IWY9 1227 aa17.41■□□□□ 0.38
CALD1-206ENST00000424922 PNMA1Q8ND90 353 aa17.41■□□□□ 0.38
CALD1-206ENST00000424922 PHKBQ93100 1093 aa17.41■□□□□ 0.38
CALD1-206ENST00000424922 TMEM47Q9BQJ4 181 aa17.41■□□□□ 0.38
CALD1-206ENST00000424922 CCDC196A0A1B0GTZ2 297 aa17.41■□□□□ 0.38
CALD1-206ENST00000424922 TNNI2P48788 182 aa17.41■□□□□ 0.38
CALD1-206ENST00000424922 TATDN1Q6P1N9 297 aa17.41■□□□□ 0.38
CALD1-206ENST00000424922 CMTR1Q8N1G2 835 aaKnown RBP17.41■□□□□ 0.38
CALD1-206ENST00000424922 CCDC17Q96LX7 622 aa17.41■□□□□ 0.38
CALD1-206ENST00000424922 ORC3Q9UBD5 711 aaPredicted RBP17.41■□□□□ 0.38
CALD1-206ENST00000424922 HACL1Q9UJ83 578 aa17.41■□□□□ 0.38
CALD1-206ENST00000424922 KIF3AQ9Y496 699 aa17.41■□□□□ 0.38
CALD1-206ENST00000424922 FOSBP53539 338 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms