RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.76■□□□□ 0.11
VRK3-203ENST00000424804 EDC3Q96F86 508 aaKnown RBP15.76■□□□□ 0.11
VRK3-203ENST00000424804 CYP2B6P20813 491 aa15.75■□□□□ 0.11
VRK3-203ENST00000424804 CATSPERGQ6ZRH7 1159 aa15.75■□□□□ 0.11
VRK3-203ENST00000424804 CERS3Q8IU89 383 aa15.75■□□□□ 0.11
VRK3-203ENST00000424804 KIAA1683Q9H0B3 1180 aa15.75■□□□□ 0.11
VRK3-203ENST00000424804 OGDHLQ9ULD0 1010 aa15.75■□□□□ 0.11
VRK3-203ENST00000424804 NAV1Q8NEY1 1877 aa15.75■□□□□ 0.11
VRK3-203ENST00000424804 A0A1W2PRG0 241 aa15.74■□□□□ 0.11
VRK3-203ENST00000424804 IGHA2P01877 340 aa15.74■□□□□ 0.11
VRK3-203ENST00000424804 CHGBP05060 677 aa15.74■□□□□ 0.11
VRK3-203ENST00000424804 CCL14Q16627 93 aa15.74■□□□□ 0.11
VRK3-203ENST00000424804 CERKLQ49MI3 558 aaPredicted RBP15.74■□□□□ 0.11
VRK3-203ENST00000424804 SLC9C2Q5TAH2 1124 aa15.74■□□□□ 0.11
VRK3-203ENST00000424804 GPR142Q7Z601 462 aa15.74■□□□□ 0.11
VRK3-203ENST00000424804 TTC6Q86TZ1 520 aa15.74■□□□□ 0.11
VRK3-203ENST00000424804 SIAH1Q8IUQ4 282 aa15.74■□□□□ 0.11
VRK3-203ENST00000424804 ANKLE1Q8NAG6 615 aa15.74■□□□□ 0.11
VRK3-203ENST00000424804 NUDT12Q9BQG2 462 aa15.74■□□□□ 0.11
VRK3-203ENST00000424804 TRIM34Q9BYJ4 488 aa15.74■□□□□ 0.11
VRK3-203ENST00000424804 HMX1Q9NP08 348 aaPredicted RBP15.74■□□□□ 0.11
VRK3-203ENST00000424804 BTBD7Q9P203 1132 aa15.74■□□□□ 0.11
VRK3-203ENST00000424804 ZNF532Q9HCE3 1301 aa15.73■□□□□ 0.11
VRK3-203ENST00000424804 MAGEB6P1A0A0J9YX57 407 aa15.73■□□□□ 0.11
VRK3-203ENST00000424804 USP17L15C9J2P7 530 aa15.73■□□□□ 0.11
VRK3-203ENST00000424804 USP17L13C9JLJ4 530 aa15.73■□□□□ 0.11
VRK3-203ENST00000424804 USP17L11C9JVI0 530 aa15.73■□□□□ 0.11
VRK3-203ENST00000424804 USP17L18D6R9N7 530 aa15.73■□□□□ 0.11
VRK3-203ENST00000424804 USP17L22D6RA61 530 aa15.73■□□□□ 0.11
VRK3-203ENST00000424804 USP17L17D6RBQ6 530 aa15.73■□□□□ 0.11
VRK3-203ENST00000424804 USP17L19D6RCP7 530 aa15.73■□□□□ 0.11
VRK3-203ENST00000424804 USP17L20D6RJB6 530 aa15.73■□□□□ 0.11
VRK3-203ENST00000424804 SMIM22K7EJ46 135 aa15.73■□□□□ 0.11
VRK3-203ENST00000424804 MAPK4P31152 587 aa15.73■□□□□ 0.11
VRK3-203ENST00000424804 CACNB2Q08289 660 aaPredicted RBP15.73■□□□□ 0.11
VRK3-203ENST00000424804 USP17L24Q0WX57 530 aa15.73■□□□□ 0.11
VRK3-203ENST00000424804 ZYXQ15942 572 aaKnown RBP15.73■□□□□ 0.11
VRK3-203ENST00000424804 ABCB5Q2M3G0 1257 aa15.73■□□□□ 0.11
VRK3-203ENST00000424804 HSP90AB4PQ58FF6 505 aa15.73■□□□□ 0.11
VRK3-203ENST00000424804 KIAA1755Q5JYT7 1200 aa15.73■□□□□ 0.11
VRK3-203ENST00000424804 LHX8Q68G74 356 aa15.73■□□□□ 0.11
VRK3-203ENST00000424804 LBX2Q6XYB7 198 aa15.73■□□□□ 0.11
VRK3-203ENST00000424804 LCORLQ8N3X6 602 aa15.73■□□□□ 0.11
VRK3-203ENST00000424804 KIF1BPQ96EK5 621 aa15.73■□□□□ 0.11
VRK3-203ENST00000424804 RABGAP1Q9Y3P9 1069 aa15.73■□□□□ 0.11
VRK3-203ENST00000424804 NR2E3Q9Y5X4 410 aa15.73■□□□□ 0.11
VRK3-203ENST00000424804 GOLIM4O00461 696 aa15.72■□□□□ 0.11
VRK3-203ENST00000424804 CYP2D6P10635 497 aa15.72■□□□□ 0.11
VRK3-203ENST00000424804 PRKAR2AP13861 404 aaKnown RBP15.72■□□□□ 0.11
VRK3-203ENST00000424804 VCAM1P19320 739 aa15.72■□□□□ 0.11
VRK3-203ENST00000424804 SEPT2Q15019 361 aa15.72■□□□□ 0.11
VRK3-203ENST00000424804 RAB3GAP1Q15042 981 aa15.72■□□□□ 0.11
VRK3-203ENST00000424804 TTF1Q15361 905 aaPredicted RBP15.72■□□□□ 0.11
VRK3-203ENST00000424804 NECAB2Q7Z6G3 386 aa15.72■□□□□ 0.11
VRK3-203ENST00000424804 PLEKHH3Q7Z736 793 aa15.72■□□□□ 0.11
VRK3-203ENST00000424804 SDR42E1Q8WUS8 393 aa15.72■□□□□ 0.11
VRK3-203ENST00000424804 PAGR1Q9BTK6 254 aa15.72■□□□□ 0.11
VRK3-203ENST00000424804 DCP1AQ9NPI6 582 aaPredicted RBP15.72■□□□□ 0.11
VRK3-203ENST00000424804 FLRT1Q9NZU1 646 aa15.72■□□□□ 0.11
VRK3-203ENST00000424804 BAZ2AQ9UIF9 1905 aaKnown RBP15.72■□□□□ 0.11
VRK3-203ENST00000424804 PFASO15067 1338 aa15.71■□□□□ 0.11
VRK3-203ENST00000424804 SPDYE16A6NNV3 312 aaPredicted RBP15.71■□□□□ 0.11
VRK3-203ENST00000424804 PRKAB2O43741 272 aa15.71■□□□□ 0.11
VRK3-203ENST00000424804 EVI5O60447 810 aa15.71■□□□□ 0.11
VRK3-203ENST00000424804 COL6A1P12109 1028 aa15.71■□□□□ 0.11
VRK3-203ENST00000424804 CCND3P30281 292 aaPredicted RBP15.71■□□□□ 0.11
VRK3-203ENST00000424804 CLASRPQ8N2M8 674 aaKnown RBP15.71■□□□□ 0.11
VRK3-203ENST00000424804 GTF3C2Q8WUA4 911 aaPredicted RBP15.71■□□□□ 0.11
VRK3-203ENST00000424804 SOCS4Q8WXH5 440 aa15.71■□□□□ 0.11
VRK3-203ENST00000424804 CRBNQ96SW2 442 aa15.71■□□□□ 0.11
VRK3-203ENST00000424804 GDF15Q99988 308 aa15.71■□□□□ 0.11
VRK3-203ENST00000424804 STAP2Q9UGK3 403 aa15.71■□□□□ 0.11
VRK3-203ENST00000424804 SOX1O00570 391 aaPredicted RBP15.7■□□□□ 0.1
VRK3-203ENST00000424804 RAB11FIP3O75154 756 aa15.7■□□□□ 0.1
VRK3-203ENST00000424804 ADD2P35612 726 aa15.7■□□□□ 0.1
VRK3-203ENST00000424804 USP14P54578 494 aa15.7■□□□□ 0.1
VRK3-203ENST00000424804 SLC44A5Q8NCS7 719 aa15.7■□□□□ 0.1
VRK3-203ENST00000424804 DNAJC2Q99543 621 aaKnown RBP15.7■□□□□ 0.1
VRK3-203ENST00000424804 CRNKL1Q9BZJ0 848 aaKnown RBP15.7■□□□□ 0.1
VRK3-203ENST00000424804 MCM9Q9NXL9 1143 aa15.7■□□□□ 0.1
VRK3-203ENST00000424804 FRMPD3Q5JV73 1810 aa15.7■□□□□ 0.1
VRK3-203ENST00000424804 POLR3DP05423 398 aaPredicted RBP15.69■□□□□ 0.1
VRK3-203ENST00000424804 ATP5JP18859 108 aa15.69■□□□□ 0.1
VRK3-203ENST00000424804 PTPREP23469 700 aa15.69■□□□□ 0.1
VRK3-203ENST00000424804 RGS2P41220 211 aa15.69■□□□□ 0.1
VRK3-203ENST00000424804 MAP2K5Q13163 448 aa15.69■□□□□ 0.1
VRK3-203ENST00000424804 TRMT44Q8IYL2 757 aaKnown RBP15.69■□□□□ 0.1
VRK3-203ENST00000424804 DYNLL2Q96FJ2 89 aa15.69■□□□□ 0.1
VRK3-203ENST00000424804 NBPF3Q9H094 633 aa15.69■□□□□ 0.1
VRK3-203ENST00000424804 BOLA2Q9H3K6 86 aa15.69■□□□□ 0.1
VRK3-203ENST00000424804 RPAP3Q9H6T3 665 aaPredicted RBP15.69■□□□□ 0.1
VRK3-203ENST00000424804 ARMT1Q9H993 441 aa15.69■□□□□ 0.1
VRK3-203ENST00000424804 CABP5Q9NP86 173 aa15.69■□□□□ 0.1
VRK3-203ENST00000424804 DNAH12Q6ZR08 3092 aa15.69■□□□□ 0.1
VRK3-203ENST00000424804 A0A0G2JMZ2 1700 aa15.68■□□□□ 0.1
VRK3-203ENST00000424804 PARP14Q460N5 1801 aa15.68■□□□□ 0.1
VRK3-203ENST00000424804 MYH7P12883 1935 aa15.68■□□□□ 0.1
VRK3-203ENST00000424804 HOXC6P09630 235 aa15.68■□□□□ 0.1
VRK3-203ENST00000424804 IFIT2P09913 472 aaKnown RBP15.68■□□□□ 0.1
VRK3-203ENST00000424804 NPLOC4Q8TAT6 608 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms