RNA–Protein interactions for RNA: ENST00000423941.5

HDAC6-205, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-205ENST00000423941 MKNK2Q9HBH9 465 aa21.96■■□□□ 1.11
HDAC6-205ENST00000423941 SLC45A1Q9Y2W3 748 aa21.96■■□□□ 1.11
HDAC6-205ENST00000423941 ORC4O43929 436 aa21.95■■□□□ 1.1
HDAC6-205ENST00000423941 PTH1RQ03431 593 aa21.95■■□□□ 1.1
HDAC6-205ENST00000423941 RAB3GAP1Q15042 981 aa21.95■■□□□ 1.1
HDAC6-205ENST00000423941 ACER1Q8TDN7 264 aa21.95■■□□□ 1.1
HDAC6-205ENST00000423941 C12orf42Q96LP6 360 aa21.95■■□□□ 1.1
HDAC6-205ENST00000423941 ESYT1Q9BSJ8 1104 aa21.95■■□□□ 1.1
HDAC6-205ENST00000423941 R3HDMLQ9H3Y0 253 aa21.95■■□□□ 1.1
HDAC6-205ENST00000423941 A0A1W2PRG0 241 aa21.94■■□□□ 1.1
HDAC6-205ENST00000423941 PCP11498 1178 aaKnown RBP21.94■■□□□ 1.1
HDAC6-205ENST00000423941 ZNF444Q8N0Y2 327 aaPredicted RBP21.94■■□□□ 1.1
HDAC6-205ENST00000423941 MAP4K1Q92918 833 aa21.94■■□□□ 1.1
HDAC6-205ENST00000423941 KANSL2Q9H9L4 492 aa21.94■■□□□ 1.1
HDAC6-205ENST00000423941 INCENPQ9NQS7 918 aa21.94■■□□□ 1.1
HDAC6-205ENST00000423941 EMILIN3Q9NT22 766 aa21.94■■□□□ 1.1
HDAC6-205ENST00000423941 CTNNA3Q9UI47 895 aa21.94■■□□□ 1.1
HDAC6-205ENST00000423941 PLIN4Q96Q06 1357 aa21.94■■□□□ 1.1
HDAC6-205ENST00000423941 MPHOSPH10O00566 681 aaKnown RBP21.93■■□□□ 1.1
HDAC6-205ENST00000423941 TBC1D8O95759 1140 aa21.93■■□□□ 1.1
HDAC6-205ENST00000423941 HMGCS2P54868 508 aa21.93■■□□□ 1.1
HDAC6-205ENST00000423941 MTMR2Q13614 643 aa21.93■■□□□ 1.1
HDAC6-205ENST00000423941 STK11IPQ8N1F8 1099 aa21.93■■□□□ 1.1
HDAC6-205ENST00000423941 NEDD1Q8NHV4 660 aa21.93■■□□□ 1.1
HDAC6-205ENST00000423941 STAG1Q8WVM7 1258 aa21.93■■□□□ 1.1
HDAC6-205ENST00000423941 PRDM10Q9NQV6 1147 aa21.93■■□□□ 1.1
HDAC6-205ENST00000423941 AGTPBP1Q9UPW5 1226 aa21.93■■□□□ 1.1
HDAC6-205ENST00000423941 PDHXO00330 501 aa21.92■■□□□ 1.1
HDAC6-205ENST00000423941 ZNF213O14771 459 aa21.92■■□□□ 1.1
HDAC6-205ENST00000423941 CDC45O75419 566 aa21.92■■□□□ 1.1
HDAC6-205ENST00000423941 PRDM1O75626 825 aa21.92■■□□□ 1.1
HDAC6-205ENST00000423941 LBX1P52954 281 aa21.92■■□□□ 1.1
HDAC6-205ENST00000423941 CRHR2Q13324 411 aa21.92■■□□□ 1.1
HDAC6-205ENST00000423941 TSKSQ9UJT2 592 aa21.92■■□□□ 1.1
HDAC6-205ENST00000423941 TMX2Q9Y320 296 aa21.92■■□□□ 1.1
HDAC6-205ENST00000423941 ADGRA2Q96PE1 1338 aa21.91■■□□□ 1.1
HDAC6-205ENST00000423941 HOXA7P31268 230 aaPredicted RBP21.91■■□□□ 1.1
HDAC6-205ENST00000423941 NOVP48745 357 aa21.91■■□□□ 1.1
HDAC6-205ENST00000423941 DGKZQ13574 1117 aa21.91■■□□□ 1.1
HDAC6-205ENST00000423941 AKNAD1Q5T1N1 836 aa21.91■■□□□ 1.1
HDAC6-205ENST00000423941 USP17L2Q6R6M4 530 aa21.91■■□□□ 1.1
HDAC6-205ENST00000423941 GADL1Q6ZQY3 521 aa21.91■■□□□ 1.1
HDAC6-205ENST00000423941 TBC1D10CQ8IV04 446 aa21.91■■□□□ 1.1
HDAC6-205ENST00000423941 LSG1Q9H089 658 aaKnown RBP21.91■■□□□ 1.1
HDAC6-205ENST00000423941 NYAP2Q9P242 653 aa21.91■■□□□ 1.1
HDAC6-205ENST00000423941 NT5C2P49902 561 aa21.9■■□□□ 1.1
HDAC6-205ENST00000423941 USP14P54578 494 aa21.9■■□□□ 1.1
HDAC6-205ENST00000423941 HAND2P61296 217 aa21.9■■□□□ 1.1
HDAC6-205ENST00000423941 TFAP4Q01664 338 aa21.9■■□□□ 1.1
HDAC6-205ENST00000423941 ICA1Q05084 483 aa21.9■■□□□ 1.1
HDAC6-205ENST00000423941 TAF1CQ15572 869 aaPredicted RBP21.9■■□□□ 1.1
HDAC6-205ENST00000423941 TREML2Q5T2D2 321 aa21.9■■□□□ 1.1
HDAC6-205ENST00000423941 CLEC10AQ8IUN9 316 aa21.9■■□□□ 1.1
HDAC6-205ENST00000423941 MKL1Q969V6 931 aa21.9■■□□□ 1.1
HDAC6-205ENST00000423941 U3KPZ7 1027 aaPredicted RBP21.9■■□□□ 1.1
HDAC6-205ENST00000423941 CASP8AP2Q9UKL3 1982 aa21.9■■□□□ 1.1
HDAC6-205ENST00000423941 MYH4Q9Y623 1939 aa21.9■■□□□ 1.1
HDAC6-205ENST00000423941 GPR25O00155 361 aa21.89■■□□□ 1.09
HDAC6-205ENST00000423941 TLR2O60603 784 aa21.89■■□□□ 1.09
HDAC6-205ENST00000423941 EEF2P13639 858 aaKnown RBP21.89■■□□□ 1.09
HDAC6-205ENST00000423941 IMMTQ16891 758 aaKnown RBP21.89■■□□□ 1.09
HDAC6-205ENST00000423941 ZFYVE28Q9HCC9 887 aa21.89■■□□□ 1.09
HDAC6-205ENST00000423941 IL17RBQ9NRM6 502 aa21.89■■□□□ 1.09
HDAC6-205ENST00000423941 MTMR4Q9NYA4 1195 aa21.89■■□□□ 1.09
HDAC6-205ENST00000423941 SYNPO2Q9UMS6 1093 aa21.89■■□□□ 1.09
HDAC6-205ENST00000423941 FAM47AQ5JRC9 791 aa21.88■■□□□ 1.09
HDAC6-205ENST00000423941 MFSD6Q6ZSS7 791 aa21.88■■□□□ 1.09
HDAC6-205ENST00000423941 NKX2-3Q8TAU0 364 aa21.88■■□□□ 1.09
HDAC6-205ENST00000423941 RNF41Q9H4P4 317 aaPredicted RBP21.88■■□□□ 1.09
HDAC6-205ENST00000423941 ARHGEF10LQ9HCE6 1279 aa21.88■■□□□ 1.09
HDAC6-205ENST00000423941 TCP11L1Q9NUJ3 509 aa21.88■■□□□ 1.09
HDAC6-205ENST00000423941 TMOD4Q9NZQ9 345 aa21.88■■□□□ 1.09
HDAC6-205ENST00000423941 RLFQ13129 1914 aa21.87■■□□□ 1.09
HDAC6-205ENST00000423941 CYP21A2P08686 494 aa21.87■■□□□ 1.09
HDAC6-205ENST00000423941 TSPY3P0CV98 308 aa21.87■■□□□ 1.09
HDAC6-205ENST00000423941 TSPY8P0CW00 308 aa21.87■■□□□ 1.09
HDAC6-205ENST00000423941 KIAA1755Q5JYT7 1200 aa21.87■■□□□ 1.09
HDAC6-205ENST00000423941 C17orf99Q6UX52 265 aa21.87■■□□□ 1.09
HDAC6-205ENST00000423941 CEP95Q96GE4 821 aa21.87■■□□□ 1.09
HDAC6-205ENST00000423941 FEZ1Q99689 392 aa21.87■■□□□ 1.09
HDAC6-205ENST00000423941 NECTIN1Q15223 517 aa21.86■■□□□ 1.09
HDAC6-205ENST00000423941 CASC1Q6TDU7 716 aa21.86■■□□□ 1.09
HDAC6-205ENST00000423941 LPAR1Q92633 364 aa21.86■■□□□ 1.09
HDAC6-205ENST00000423941 ASCC2Q9H1I8 757 aaPredicted RBP21.86■■□□□ 1.09
HDAC6-205ENST00000423941 SH2D4AQ9H788 454 aa21.86■■□□□ 1.09
HDAC6-205ENST00000423941 VCPKMTQ9H867 229 aa21.86■■□□□ 1.09
HDAC6-205ENST00000423941 TSPY2A6NKD2 308 aa21.85■■□□□ 1.09
HDAC6-205ENST00000423941 CYP2C8P10632 490 aa21.85■■□□□ 1.09
HDAC6-205ENST00000423941 VCAM1P19320 739 aa21.85■■□□□ 1.09
HDAC6-205ENST00000423941 PABPC4Q13310 644 aaKnown RBP eCLIP21.85■■□□□ 1.09
HDAC6-205ENST00000423941 KIAA1211Q6ZU35 1233 aa21.85■■□□□ 1.09
HDAC6-205ENST00000423941 ZNF296Q8WUU4 475 aaPredicted RBP21.85■■□□□ 1.09
HDAC6-205ENST00000423941 PARK7Q99497 189 aaKnown RBP21.85■■□□□ 1.09
HDAC6-205ENST00000423941 RBM8AQ9Y5S9 174 aaKnown RBP21.85■■□□□ 1.09
HDAC6-205ENST00000423941 PARP14Q460N5 1801 aa21.85■■□□□ 1.09
HDAC6-205ENST00000423941 NEDD4P46934 1319 aa21.84■■□□□ 1.09
HDAC6-205ENST00000423941 RANBP6O60518 1105 aaKnown RBP21.84■■□□□ 1.09
HDAC6-205ENST00000423941 TTLL1O95922 423 aa21.84■■□□□ 1.09
HDAC6-205ENST00000423941 BCRP11274 1271 aa21.84■■□□□ 1.09
HDAC6-205ENST00000423941 ZYXQ15942 572 aaKnown RBP21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms