RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 POTEEQ6S8J3 1075 aa18.31■□□□□ 0.52
USB1-202ENST00000423271 PUS7LQ9H0K6 701 aaKnown RBP18.31■□□□□ 0.52
USB1-202ENST00000423271 UNC93B1Q9H1C4 597 aa18.31■□□□□ 0.52
USB1-202ENST00000423271 CABP5Q9NP86 173 aa18.31■□□□□ 0.52
USB1-202ENST00000423271 MPHOSPH10O00566 681 aaKnown RBP18.3■□□□□ 0.52
USB1-202ENST00000423271 INHAP05111 366 aa18.3■□□□□ 0.52
USB1-202ENST00000423271 KIAA1683Q9H0B3 1180 aa18.3■□□□□ 0.52
USB1-202ENST00000423271 RNF208Q9H0X6 261 aa18.3■□□□□ 0.52
USB1-202ENST00000423271 ATP8A2Q9NTI2 1148 aa18.3■□□□□ 0.52
USB1-202ENST00000423271 RBPJLQ9UBG7 517 aa18.3■□□□□ 0.52
USB1-202ENST00000423271 VCAM1P19320 739 aa18.29■□□□□ 0.52
USB1-202ENST00000423271 KCNA4P22459 653 aa18.29■□□□□ 0.52
USB1-202ENST00000423271 ZSCAN25Q6NSZ9 544 aa18.29■□□□□ 0.52
USB1-202ENST00000423271 OTUD7AQ8TE49 926 aaPredicted RBP18.29■□□□□ 0.52
USB1-202ENST00000423271 PXYLP1Q8TE99 480 aa18.29■□□□□ 0.52
USB1-202ENST00000423271 GPATCH3Q96I76 525 aa18.29■□□□□ 0.52
USB1-202ENST00000423271 PAGR1Q9BTK6 254 aa18.29■□□□□ 0.52
USB1-202ENST00000423271 GJD2Q9UKL4 321 aa18.29■□□□□ 0.52
USB1-202ENST00000423271 SLC4A4Q9Y6R1 1079 aa18.29■□□□□ 0.52
USB1-202ENST00000423271 A0A1W2PRG0 241 aa18.28■□□□□ 0.52
USB1-202ENST00000423271 GJB1P08034 283 aa18.28■□□□□ 0.52
USB1-202ENST00000423271 USP14P54578 494 aa18.28■□□□□ 0.52
USB1-202ENST00000423271 C12orf60Q5U649 245 aa18.28■□□□□ 0.52
USB1-202ENST00000423271 CLEC10AQ8IUN9 316 aa18.28■□□□□ 0.52
USB1-202ENST00000423271 KBTBD3Q8NAB2 608 aa18.28■□□□□ 0.52
USB1-202ENST00000423271 GPRC5AQ8NFJ5 357 aa18.28■□□□□ 0.52
USB1-202ENST00000423271 SWAP70Q9UH65 585 aa18.28■□□□□ 0.52
USB1-202ENST00000423271 USP17L15C9J2P7 530 aa18.27■□□□□ 0.52
USB1-202ENST00000423271 USP17L13C9JLJ4 530 aa18.27■□□□□ 0.52
USB1-202ENST00000423271 USP17L12C9JPN9 530 aa18.27■□□□□ 0.52
USB1-202ENST00000423271 USP17L11C9JVI0 530 aa18.27■□□□□ 0.52
USB1-202ENST00000423271 USP17L21D6R901 530 aa18.27■□□□□ 0.52
USB1-202ENST00000423271 USP17L18D6R9N7 530 aa18.27■□□□□ 0.52
USB1-202ENST00000423271 USP17L22D6RA61 530 aa18.27■□□□□ 0.52
USB1-202ENST00000423271 USP17L17D6RBQ6 530 aa18.27■□□□□ 0.52
USB1-202ENST00000423271 USP17L19D6RCP7 530 aa18.27■□□□□ 0.52
USB1-202ENST00000423271 USP17L20D6RJB6 530 aa18.27■□□□□ 0.52
USB1-202ENST00000423271 AKR1B1P15121 316 aa18.27■□□□□ 0.52
USB1-202ENST00000423271 GJA8P48165 433 aa18.27■□□□□ 0.52
USB1-202ENST00000423271 ERVK-9P63128 1117 aa18.27■□□□□ 0.52
USB1-202ENST00000423271 ERVK-24P63145 666 aa18.27■□□□□ 0.52
USB1-202ENST00000423271 USP17L24Q0WX57 530 aa18.27■□□□□ 0.52
USB1-202ENST00000423271 Q3C1V9 767 aa18.27■□□□□ 0.52
USB1-202ENST00000423271 PORCNQ9H237 461 aa18.27■□□□□ 0.52
USB1-202ENST00000423271 CEP290O15078 2479 aa18.27■□□□□ 0.51
USB1-202ENST00000423271 CNMDO75829 334 aa18.26■□□□□ 0.51
USB1-202ENST00000423271 CATSPERGQ6ZRH7 1159 aa18.26■□□□□ 0.51
USB1-202ENST00000423271 TMEM179Q6ZVK1 233 aa18.26■□□□□ 0.51
USB1-202ENST00000423271 GTF3C2Q8WUA4 911 aaPredicted RBP18.26■□□□□ 0.51
USB1-202ENST00000423271 OSBP2Q969R2 916 aa18.26■□□□□ 0.51
USB1-202ENST00000423271 STRBPQ96SI9 672 aaKnown RBP18.26■□□□□ 0.51
USB1-202ENST00000423271 RPAP3Q9H6T3 665 aaPredicted RBP18.26■□□□□ 0.51
USB1-202ENST00000423271 CDK8P49336 464 aa18.25■□□□□ 0.51
USB1-202ENST00000423271 TRIM32Q13049 653 aa18.25■□□□□ 0.51
USB1-202ENST00000423271 CTR9Q6PD62 1173 aa18.25■□□□□ 0.51
USB1-202ENST00000423271 C16orf86Q6ZW13 317 aa18.25■□□□□ 0.51
USB1-202ENST00000423271 EXOC6Q8TAG9 804 aa18.25■□□□□ 0.51
USB1-202ENST00000423271 NKX2-3Q8TAU0 364 aa18.25■□□□□ 0.51
USB1-202ENST00000423271 PI4K2BQ8TCG2 481 aa18.25■□□□□ 0.51
USB1-202ENST00000423271 U2AF1L4Q8WU68 220 aaKnown RBP18.25■□□□□ 0.51
USB1-202ENST00000423271 APPBP2Q92624 585 aa18.25■□□□□ 0.51
USB1-202ENST00000423271 RNF113AO15541 343 aaKnown RBP18.24■□□□□ 0.51
USB1-202ENST00000423271 HMGCRP04035 888 aa18.24■□□□□ 0.51
USB1-202ENST00000423271 CYP2B6P20813 491 aa18.24■□□□□ 0.51
USB1-202ENST00000423271 IRX6P78412 446 aaPredicted RBP18.24■□□□□ 0.51
USB1-202ENST00000423271 KIAA1755Q5JYT7 1200 aa18.24■□□□□ 0.51
USB1-202ENST00000423271 SIAH1Q8IUQ4 282 aa18.24■□□□□ 0.51
USB1-202ENST00000423271 AMOTL1Q8IY63 956 aa18.24■□□□□ 0.51
USB1-202ENST00000423271 DDRGK1Q96HY6 314 aa18.24■□□□□ 0.51
USB1-202ENST00000423271 TTC41PQ6P2S7 1318 aa18.23■□□□□ 0.51
USB1-202ENST00000423271 SPDYE16A6NNV3 312 aaPredicted RBP18.23■□□□□ 0.51
USB1-202ENST00000423271 GSG1L2A8MUP6 293 aa18.23■□□□□ 0.51
USB1-202ENST00000423271 M0R2C6 588 aa18.23■□□□□ 0.51
USB1-202ENST00000423271 MAPK4P31152 587 aa18.23■□□□□ 0.51
USB1-202ENST00000423271 ICA1Q05084 483 aa18.23■□□□□ 0.51
USB1-202ENST00000423271 GPR142Q7Z601 462 aa18.23■□□□□ 0.51
USB1-202ENST00000423271 UBE2Q1Q7Z7E8 422 aa18.23■□□□□ 0.51
USB1-202ENST00000423271 TRIB2Q92519 343 aa18.23■□□□□ 0.51
USB1-202ENST00000423271 DEFB118Q96PH6 123 aa18.23■□□□□ 0.51
USB1-202ENST00000423271 PAK6Q9NQU5 681 aaPredicted RBP18.23■□□□□ 0.51
USB1-202ENST00000423271 BTBD7Q9P203 1132 aa18.23■□□□□ 0.51
USB1-202ENST00000423271 ARPP21Q9UBL0 812 aaPredicted RBP18.23■□□□□ 0.51
USB1-202ENST00000423271 RABGAP1Q9Y3P9 1069 aa18.23■□□□□ 0.51
USB1-202ENST00000423271 RLFQ13129 1914 aa18.23■□□□□ 0.51
USB1-202ENST00000423271 SALL3Q9BXA9 1300 aa18.23■□□□□ 0.51
USB1-202ENST00000423271 GPAA1O43292 621 aa18.22■□□□□ 0.51
USB1-202ENST00000423271 SGPL1O95470 568 aa18.22■□□□□ 0.51
USB1-202ENST00000423271 LBX2Q6XYB7 198 aa18.22■□□□□ 0.51
USB1-202ENST00000423271 SOCS4Q8WXH5 440 aa18.22■□□□□ 0.51
USB1-202ENST00000423271 NUDT12Q9BQG2 462 aa18.22■□□□□ 0.51
USB1-202ENST00000423271 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.22■□□□□ 0.51
USB1-202ENST00000423271 EPB41L4AQ9HCS5 686 aaPredicted RBP18.22■□□□□ 0.51
USB1-202ENST00000423271 A0A0G2JMZ2 1700 aa18.21■□□□□ 0.51
USB1-202ENST00000423271 ERC2O15083 957 aa18.21■□□□□ 0.51
USB1-202ENST00000423271 GLRX3O76003 335 aaKnown RBP18.21■□□□□ 0.51
USB1-202ENST00000423271 ZFYP08048 801 aaPredicted RBP18.21■□□□□ 0.51
USB1-202ENST00000423271 MX1P20591 662 aa18.21■□□□□ 0.51
USB1-202ENST00000423271 MORN1Q5T089 497 aa18.21■□□□□ 0.51
USB1-202ENST00000423271 PLEKHH3Q7Z736 793 aa18.21■□□□□ 0.51
USB1-202ENST00000423271 CCAR1Q8IX12 1150 aaKnown RBP18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms