RNA–Protein interactions for RNA: ENST00000421434.5

SCRN1-204, Transcript of secernin 1, humanhuman

TSL 3

Gene SCRN1, Length 1,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-204ENST00000421434 LHX8Q68G74 356 aa11.43□□□□□ -0.58
SCRN1-204ENST00000421434 TATDN1Q6P1N9 297 aa11.43□□□□□ -0.58
SCRN1-204ENST00000421434 TRMT44Q8IYL2 757 aaKnown RBP11.43□□□□□ -0.58
SCRN1-204ENST00000421434 ACER1Q8TDN7 264 aa11.43□□□□□ -0.58
SCRN1-204ENST00000421434 EDC3Q96F86 508 aaKnown RBP11.43□□□□□ -0.58
SCRN1-204ENST00000421434 SERPINB13Q9UIV8 391 aa11.43□□□□□ -0.58
SCRN1-204ENST00000421434 ATAD5Q96QE3 1844 aa11.43□□□□□ -0.58
SCRN1-204ENST00000421434 LOC285556D6RIA3 1793 aa11.43□□□□□ -0.58
SCRN1-204ENST00000421434 PFASO15067 1338 aa11.42□□□□□ -0.58
SCRN1-204ENST00000421434 DLL1O00548 723 aa11.42□□□□□ -0.58
SCRN1-204ENST00000421434 CNMDO75829 334 aa11.42□□□□□ -0.58
SCRN1-204ENST00000421434 PLCD1P51178 756 aa11.42□□□□□ -0.58
SCRN1-204ENST00000421434 MAP3K12Q12852 859 aa11.42□□□□□ -0.58
SCRN1-204ENST00000421434 MAP2K5Q13163 448 aa11.42□□□□□ -0.58
SCRN1-204ENST00000421434 ABCB5Q2M3G0 1257 aa11.42□□□□□ -0.58
SCRN1-204ENST00000421434 CATSPERGQ6ZRH7 1159 aa11.42□□□□□ -0.58
SCRN1-204ENST00000421434 Q7L0L9 218 aa11.42□□□□□ -0.58
SCRN1-204ENST00000421434 TTC6Q86TZ1 520 aa11.42□□□□□ -0.58
SCRN1-204ENST00000421434 DEFB123Q8N688 67 aa11.42□□□□□ -0.58
SCRN1-204ENST00000421434 GTF3C2Q8WUA4 911 aaPredicted RBP11.42□□□□□ -0.58
SCRN1-204ENST00000421434 UBE2OQ9C0C9 1292 aaKnown RBP11.42□□□□□ -0.58
SCRN1-204ENST00000421434 EXOC6BQ9Y2D4 811 aa11.42□□□□□ -0.58
SCRN1-204ENST00000421434 RABGAP1Q9Y3P9 1069 aa11.42□□□□□ -0.58
SCRN1-204ENST00000421434 SIPA1L1O43166 1804 aa11.42□□□□□ -0.58
SCRN1-204ENST00000421434 CUL9Q8IWT3 2517 aa11.41□□□□□ -0.58
SCRN1-204ENST00000421434 POLR3DP05423 398 aaPredicted RBP11.41□□□□□ -0.58
SCRN1-204ENST00000421434 VCAM1P19320 739 aa11.41□□□□□ -0.58
SCRN1-204ENST00000421434 CNGA1P29973 690 aa11.41□□□□□ -0.58
SCRN1-204ENST00000421434 CCNA1P78396 465 aa11.41□□□□□ -0.58
SCRN1-204ENST00000421434 LRRC26Q2I0M4 334 aa11.41□□□□□ -0.58
SCRN1-204ENST00000421434 AACSQ86V21 672 aa11.41□□□□□ -0.58
SCRN1-204ENST00000421434 APBA2Q99767 749 aa11.41□□□□□ -0.58
SCRN1-204ENST00000421434 KIAA1683Q9H0B3 1180 aa11.41□□□□□ -0.58
SCRN1-204ENST00000421434 CABP5Q9NP86 173 aa11.41□□□□□ -0.58
SCRN1-204ENST00000421434 FLRT1Q9NZU1 646 aa11.41□□□□□ -0.58
SCRN1-204ENST00000421434 BTBD7Q9P203 1132 aa11.41□□□□□ -0.58
SCRN1-204ENST00000421434 PLXNB2O15031 1838 aa11.4□□□□□ -0.58
SCRN1-204ENST00000421434 APBB1O00213 710 aa11.4□□□□□ -0.58
SCRN1-204ENST00000421434 MPHOSPH10O00566 681 aaKnown RBP11.4□□□□□ -0.58
SCRN1-204ENST00000421434 IGSF3O75054 1194 aa11.4□□□□□ -0.58
SCRN1-204ENST00000421434 GLRX3O76003 335 aaKnown RBP11.4□□□□□ -0.58
SCRN1-204ENST00000421434 COL6A1P12109 1028 aa11.4□□□□□ -0.58
SCRN1-204ENST00000421434 SHMT1P34896 483 aa11.4□□□□□ -0.58
SCRN1-204ENST00000421434 USP14P54578 494 aa11.4□□□□□ -0.58
SCRN1-204ENST00000421434 MDM2Q00987 491 aaPredicted RBP11.4□□□□□ -0.58
SCRN1-204ENST00000421434 ATP2B2Q01814 1243 aa11.4□□□□□ -0.58
SCRN1-204ENST00000421434 EVX2Q03828 476 aa11.4□□□□□ -0.58
SCRN1-204ENST00000421434 MAPK8IP2Q13387 824 aaPredicted RBP11.4□□□□□ -0.58
SCRN1-204ENST00000421434 SEPT2Q15019 361 aa11.4□□□□□ -0.58
SCRN1-204ENST00000421434 MFSD14CQ5VZR4 134 aa11.4□□□□□ -0.58
SCRN1-204ENST00000421434 CEP85Q6P2H3 762 aa11.4□□□□□ -0.58
SCRN1-204ENST00000421434 CERS3Q8IU89 383 aa11.4□□□□□ -0.58
SCRN1-204ENST00000421434 TDHQ8IZJ6 230 aa11.4□□□□□ -0.58
SCRN1-204ENST00000421434 C12orf42Q96LP6 360 aa11.4□□□□□ -0.58
SCRN1-204ENST00000421434 SENP6Q9GZR1 1112 aaPredicted RBP11.4□□□□□ -0.58
SCRN1-204ENST00000421434 EHD4Q9H223 541 aa11.4□□□□□ -0.58
SCRN1-204ENST00000421434 RPAP3Q9H6T3 665 aaPredicted RBP11.4□□□□□ -0.58
SCRN1-204ENST00000421434 IL1RAPL2Q9NP60 686 aa11.4□□□□□ -0.58
SCRN1-204ENST00000421434 ALPK3Q96L96 1907 aa11.4□□□□□ -0.58
SCRN1-204ENST00000421434 MYO5AQ9Y4I1 1855 aaKnown RBP11.4□□□□□ -0.59
SCRN1-204ENST00000421434 MAGEB6P1A0A0J9YX57 407 aa11.39□□□□□ -0.59
SCRN1-204ENST00000421434 SLC15A5A6NIM6 579 aa11.39□□□□□ -0.59
SCRN1-204ENST00000421434 PTPREP23469 700 aa11.39□□□□□ -0.59
SCRN1-204ENST00000421434 CYP2C19P33261 490 aa11.39□□□□□ -0.59
SCRN1-204ENST00000421434 GUCY1A2P33402 732 aa11.39□□□□□ -0.59
SCRN1-204ENST00000421434 ATN1P54259 1190 aaPredicted RBP11.39□□□□□ -0.59
SCRN1-204ENST00000421434 HNRNPUQ00839 825 aaKnown RBP eCLIP11.39□□□□□ -0.59
SCRN1-204ENST00000421434 SLC9C2Q5TAH2 1124 aa11.39□□□□□ -0.59
SCRN1-204ENST00000421434 NPLOC4Q8TAT6 608 aa11.39□□□□□ -0.59
SCRN1-204ENST00000421434 PANK1Q8TE04 598 aa11.39□□□□□ -0.59
SCRN1-204ENST00000421434 RIOK1Q9BRS2 568 aaKnown RBP11.39□□□□□ -0.59
SCRN1-204ENST00000421434 MCM9Q9NXL9 1143 aa11.39□□□□□ -0.59
SCRN1-204ENST00000421434 IVNS1ABPQ9Y6Y0 642 aa11.39□□□□□ -0.59
SCRN1-204ENST00000421434 DNAH12Q6ZR08 3092 aa11.38□□□□□ -0.59
SCRN1-204ENST00000421434 SPDYE16A6NNV3 312 aaPredicted RBP11.38□□□□□ -0.59
SCRN1-204ENST00000421434 LRIT3Q3SXY7 679 aa11.38□□□□□ -0.59
SCRN1-204ENST00000421434 DPP9Q86TI2 863 aa11.38□□□□□ -0.59
SCRN1-204ENST00000421434 ERC1Q8IUD2 1116 aa11.38□□□□□ -0.59
SCRN1-204ENST00000421434 DDX20Q9UHI6 824 aaKnown RBP11.38□□□□□ -0.59
SCRN1-204ENST00000421434 DDX60LQ5H9U9 1706 aaKnown RBP11.38□□□□□ -0.59
SCRN1-204ENST00000421434 A0A1W2PRG0 241 aa11.37□□□□□ -0.59
SCRN1-204ENST00000421434 MYCNP04198 464 aaPredicted RBP11.37□□□□□ -0.59
SCRN1-204ENST00000421434 CYP2D6P10635 497 aa11.37□□□□□ -0.59
SCRN1-204ENST00000421434 PDE6AP16499 860 aa11.37□□□□□ -0.59
SCRN1-204ENST00000421434 GRB14Q14449 540 aa11.37□□□□□ -0.59
SCRN1-204ENST00000421434 COG2Q14746 738 aa11.37□□□□□ -0.59
SCRN1-204ENST00000421434 TTF1Q15361 905 aaPredicted RBP11.37□□□□□ -0.59
SCRN1-204ENST00000421434 GPR153Q6NV75 609 aa11.37□□□□□ -0.59
SCRN1-204ENST00000421434 SAMD1Q6SPF0 538 aaPredicted RBP11.37□□□□□ -0.59
SCRN1-204ENST00000421434 SLC44A5Q8NCS7 719 aa11.37□□□□□ -0.59
SCRN1-204ENST00000421434 TRPV1Q8NER1 839 aa11.37□□□□□ -0.59
SCRN1-204ENST00000421434 RHPN1Q8TCX5 695 aa11.37□□□□□ -0.59
SCRN1-204ENST00000421434 SDR42E1Q8WUS8 393 aa11.37□□□□□ -0.59
SCRN1-204ENST00000421434 DNAJC2Q99543 621 aaKnown RBP11.37□□□□□ -0.59
SCRN1-204ENST00000421434 CRNKL1Q9BZJ0 848 aaKnown RBP11.37□□□□□ -0.59
SCRN1-204ENST00000421434 TANGO6Q9C0B7 1094 aa11.37□□□□□ -0.59
SCRN1-204ENST00000421434 HOXC10Q9NYD6 342 aa11.37□□□□□ -0.59
SCRN1-204ENST00000421434 CDK5RAP2Q96SN8 1893 aa11.37□□□□□ -0.59
SCRN1-204ENST00000421434 ZNF532Q9HCE3 1301 aa11.36□□□□□ -0.59
SCRN1-204ENST00000421434 GOLIM4O00461 696 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms