RNA–Protein interactions for RNA: ENST00000421263.1

VARS2-202, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 460 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-202ENST00000421263 USP17L13C9JLJ4 530 aa22.89■■□□□ 1.25
VARS2-202ENST00000421263 USP17L11C9JVI0 530 aa22.89■■□□□ 1.25
VARS2-202ENST00000421263 USP17L18D6R9N7 530 aa22.89■■□□□ 1.25
VARS2-202ENST00000421263 USP17L22D6RA61 530 aa22.89■■□□□ 1.25
VARS2-202ENST00000421263 USP17L17D6RBQ6 530 aa22.89■■□□□ 1.25
VARS2-202ENST00000421263 USP17L19D6RCP7 530 aa22.89■■□□□ 1.25
VARS2-202ENST00000421263 USP17L20D6RJB6 530 aa22.89■■□□□ 1.25
VARS2-202ENST00000421263 XRCC5P13010 732 aaKnown RBP22.89■■□□□ 1.25
VARS2-202ENST00000421263 MAPK4P31152 587 aa22.89■■□□□ 1.25
VARS2-202ENST00000421263 EVX2Q03828 476 aa22.89■■□□□ 1.25
VARS2-202ENST00000421263 USP17L24Q0WX57 530 aa22.89■■□□□ 1.25
VARS2-202ENST00000421263 RAB3GAP1Q15042 981 aa22.89■■□□□ 1.25
VARS2-202ENST00000421263 C20orf194Q5TEA3 1177 aa22.89■■□□□ 1.25
VARS2-202ENST00000421263 LCORLQ8N3X6 602 aa22.89■■□□□ 1.25
VARS2-202ENST00000421263 ACER1Q8TDN7 264 aa22.89■■□□□ 1.25
VARS2-202ENST00000421263 USP6NLQ92738 828 aa22.89■■□□□ 1.25
VARS2-202ENST00000421263 HAUS7Q99871 368 aa22.89■■□□□ 1.25
VARS2-202ENST00000421263 NUDT12Q9BQG2 462 aa22.89■■□□□ 1.25
VARS2-202ENST00000421263 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.89■■□□□ 1.25
VARS2-202ENST00000421263 BOLA2Q9H3K6 86 aa22.89■■□□□ 1.25
VARS2-202ENST00000421263 MCM9Q9NXL9 1143 aa22.89■■□□□ 1.25
VARS2-202ENST00000421263 ADD2P35612 726 aa22.88■■□□□ 1.25
VARS2-202ENST00000421263 TRIM32Q13049 653 aa22.88■■□□□ 1.25
VARS2-202ENST00000421263 SDR42E1Q8WUS8 393 aa22.88■■□□□ 1.25
VARS2-202ENST00000421263 TRIB2Q92519 343 aa22.88■■□□□ 1.25
VARS2-202ENST00000421263 PORCNQ9H237 461 aa22.88■■□□□ 1.25
VARS2-202ENST00000421263 RABGAP1Q9Y3P9 1069 aa22.88■■□□□ 1.25
VARS2-202ENST00000421263 CNMDO75829 334 aa22.87■■□□□ 1.25
VARS2-202ENST00000421263 CYP2B6P20813 491 aa22.87■■□□□ 1.25
VARS2-202ENST00000421263 ZYXQ15942 572 aaKnown RBP22.87■■□□□ 1.25
VARS2-202ENST00000421263 MAP3K21Q5TCX8 1036 aa22.87■■□□□ 1.25
VARS2-202ENST00000421263 LBX2Q6XYB7 198 aa22.87■■□□□ 1.25
VARS2-202ENST00000421263 SOCS4Q8WXH5 440 aa22.87■■□□□ 1.25
VARS2-202ENST00000421263 FEZ1Q99689 392 aa22.87■■□□□ 1.25
VARS2-202ENST00000421263 HMX1Q9NP08 348 aaPredicted RBP22.87■■□□□ 1.25
VARS2-202ENST00000421263 NAV1Q8NEY1 1877 aa22.86■■□□□ 1.25
VARS2-202ENST00000421263 FXR1P51114 621 aaKnown RBP eCLIP22.86■■□□□ 1.25
VARS2-202ENST00000421263 SLFNL1Q499Z3 407 aa22.86■■□□□ 1.25
VARS2-202ENST00000421263 MORN1Q5T089 497 aa22.86■■□□□ 1.25
VARS2-202ENST00000421263 ARMT1Q9H993 441 aa22.86■■□□□ 1.25
VARS2-202ENST00000421263 ATP8A2Q9NTI2 1148 aa22.86■■□□□ 1.25
VARS2-202ENST00000421263 VCAM1P19320 739 aa22.85■■□□□ 1.25
VARS2-202ENST00000421263 SEPT2Q15019 361 aa22.85■■□□□ 1.25
VARS2-202ENST00000421263 GPR142Q7Z601 462 aa22.85■■□□□ 1.25
VARS2-202ENST00000421263 PLEKHH3Q7Z736 793 aa22.85■■□□□ 1.25
VARS2-202ENST00000421263 ANKLE1Q8NAG6 615 aa22.85■■□□□ 1.25
VARS2-202ENST00000421263 PAGR1Q9BTK6 254 aa22.85■■□□□ 1.25
VARS2-202ENST00000421263 LRRCC1Q9C099 1032 aa22.85■■□□□ 1.25
VARS2-202ENST00000421263 A0A1W2PRG0 241 aa22.84■■□□□ 1.25
VARS2-202ENST00000421263 PRKAB2O43741 272 aa22.84■■□□□ 1.25
VARS2-202ENST00000421263 UBE3CQ15386 1083 aa22.84■■□□□ 1.25
VARS2-202ENST00000421263 TRMT44Q8IYL2 757 aaKnown RBP22.84■■□□□ 1.25
VARS2-202ENST00000421263 PAWRQ96IZ0 340 aaKnown RBP22.84■■□□□ 1.25
VARS2-202ENST00000421263 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.84■■□□□ 1.254e-9■■■■■ 38.8
VARS2-202ENST00000421263 BCL11AQ9H165 835 aa22.84■■□□□ 1.25
VARS2-202ENST00000421263 SWAP70Q9UH65 585 aa22.84■■□□□ 1.25
VARS2-202ENST00000421263 CYP2D6P10635 497 aa22.83■■□□□ 1.25
VARS2-202ENST00000421263 MNX1P50219 401 aaPredicted RBP22.83■■□□□ 1.25
VARS2-202ENST00000421263 PRO3102Q9H379 93 aa22.83■■□□□ 1.25
VARS2-202ENST00000421263 NR2E3Q9Y5X4 410 aa22.83■■□□□ 1.25
VARS2-202ENST00000421263 MBD4O95243 580 aa22.82■■□□□ 1.24
VARS2-202ENST00000421263 CHRDL2Q6WN34 429 aa22.82■■□□□ 1.24
VARS2-202ENST00000421263 SIAH1Q8IUQ4 282 aa22.82■■□□□ 1.24
VARS2-202ENST00000421263 CCAR1Q8IX12 1150 aaKnown RBP22.82■■□□□ 1.24
VARS2-202ENST00000421263 BTBD7Q9P203 1132 aa22.82■■□□□ 1.24
VARS2-202ENST00000421263 OGDHLQ9ULD0 1010 aa22.82■■□□□ 1.24
VARS2-202ENST00000421263 SMARCA5O60264 1052 aaPredicted RBP22.81■■□□□ 1.24
VARS2-202ENST00000421263 CHGBP05060 677 aa22.81■■□□□ 1.24
VARS2-202ENST00000421263 PRKAR2AP13861 404 aaKnown RBP22.81■■□□□ 1.24
VARS2-202ENST00000421263 RGS2P41220 211 aa22.81■■□□□ 1.24
VARS2-202ENST00000421263 CCNA1P78396 465 aa22.81■■□□□ 1.24
VARS2-202ENST00000421263 C12orf60Q5U649 245 aa22.81■■□□□ 1.24
VARS2-202ENST00000421263 TMEM179Q6ZVK1 233 aa22.81■■□□□ 1.24
VARS2-202ENST00000421263 NECAB2Q7Z6G3 386 aa22.81■■□□□ 1.24
VARS2-202ENST00000421263 SLC44A5Q8NCS7 719 aa22.81■■□□□ 1.24
VARS2-202ENST00000421263 DIS3LQ8TF46 1054 aaKnown RBP22.81■■□□□ 1.24
VARS2-202ENST00000421263 DYNLL2Q96FJ2 89 aa22.81■■□□□ 1.24
VARS2-202ENST00000421263 RPAP3Q9H6T3 665 aaPredicted RBP22.81■■□□□ 1.24
VARS2-202ENST00000421263 SPDYE16A6NNV3 312 aaPredicted RBP22.8■■□□□ 1.24
VARS2-202ENST00000421263 CACNB2Q08289 660 aaPredicted RBP22.8■■□□□ 1.24
VARS2-202ENST00000421263 DCTPP1Q9H773 170 aa22.8■■□□□ 1.24
VARS2-202ENST00000421263 RBM27Q9P2N5 1060 aaKnown RBP22.8■■□□□ 1.24
VARS2-202ENST00000421263 MPHOSPH10O00566 681 aaKnown RBP22.79■■□□□ 1.24
VARS2-202ENST00000421263 EVI5O60447 810 aa22.79■■□□□ 1.24
VARS2-202ENST00000421263 PTPREP23469 700 aa22.79■■□□□ 1.24
VARS2-202ENST00000421263 MAP2K5Q13163 448 aa22.79■■□□□ 1.24
VARS2-202ENST00000421263 CCL14Q16627 93 aa22.79■■□□□ 1.24
VARS2-202ENST00000421263 ZSCAN25Q6NSZ9 544 aa22.79■■□□□ 1.24
VARS2-202ENST00000421263 APBA2Q99767 749 aa22.79■■□□□ 1.24
VARS2-202ENST00000421263 HOXC10Q9NYD6 342 aa22.79■■□□□ 1.24
VARS2-202ENST00000421263 RANBP2P49792 3224 aaKnown RBP22.79■■□□□ 1.24
VARS2-202ENST00000421263 SLC15A5A6NIM6 579 aa22.78■■□□□ 1.24
VARS2-202ENST00000421263 USP17L12C9JPN9 530 aa22.78■■□□□ 1.24
VARS2-202ENST00000421263 USP17L21D6R901 530 aa22.78■■□□□ 1.24
VARS2-202ENST00000421263 SMIM22K7EJ46 135 aa22.78■■□□□ 1.24
VARS2-202ENST00000421263 GLRX3O76003 335 aaKnown RBP22.78■■□□□ 1.24
VARS2-202ENST00000421263 ZKSCAN1P17029 563 aaPredicted RBP22.78■■□□□ 1.24
VARS2-202ENST00000421263 COG2Q14746 738 aa22.78■■□□□ 1.24
VARS2-202ENST00000421263 KIAA1755Q5JYT7 1200 aa22.78■■□□□ 1.24
VARS2-202ENST00000421263 CCDC17Q96LX7 622 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms