RNA–Protein interactions for RNA: ENST00000420101.6

SEMA4D-204, Transcript of semaphorin 4D, humanhuman

TSL 1 (best) BASIC

Gene SEMA4D, Length 1,837 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-204ENST00000420101 JAK2O60674 1132 aa16.93■□□□□ 0.3
SEMA4D-204ENST00000420101 PLCG2P16885 1265 aa16.93■□□□□ 0.3
SEMA4D-204ENST00000420101 AOC3Q16853 763 aa16.93■□□□□ 0.3
SEMA4D-204ENST00000420101 SYNE3Q6ZMZ3 975 aa16.93■□□□□ 0.3
SEMA4D-204ENST00000420101 TEX11Q8IYF3 940 aa16.93■□□□□ 0.3
SEMA4D-204ENST00000420101 BICD2Q8TD16 824 aa16.93■□□□□ 0.3
SEMA4D-204ENST00000420101 UBAC1Q9BSL1 405 aa16.93■□□□□ 0.3
SEMA4D-204ENST00000420101 RTFDC1Q9BY42 306 aaPredicted RBP16.93■□□□□ 0.3
SEMA4D-204ENST00000420101 UBXN6Q9BZV1 441 aa16.93■□□□□ 0.3
SEMA4D-204ENST00000420101 ANAPC4Q9UJX5 808 aa16.93■□□□□ 0.3
SEMA4D-204ENST00000420101 TTF2Q9UNY4 1162 aaKnown RBP16.93■□□□□ 0.3
SEMA4D-204ENST00000420101 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.93■□□□□ 0.3
SEMA4D-204ENST00000420101 TACC3Q9Y6A5 838 aa16.93■□□□□ 0.3
SEMA4D-204ENST00000420101 CCDC88AQ3V6T2 1871 aa16.93■□□□□ 0.3
SEMA4D-204ENST00000420101 DHX16O60231 1041 aaKnown RBP16.93■□□□□ 0.3
SEMA4D-204ENST00000420101 ECE2O60344 883 aa16.93■□□□□ 0.3
SEMA4D-204ENST00000420101 RANBP6O60518 1105 aaKnown RBP16.93■□□□□ 0.3
SEMA4D-204ENST00000420101 CLCN6P51797 869 aa16.93■□□□□ 0.3
SEMA4D-204ENST00000420101 BPIFA3Q9BQP9 254 aa16.93■□□□□ 0.3
SEMA4D-204ENST00000420101 LLPHQ9BRT6 129 aaKnown RBP16.93■□□□□ 0.3
SEMA4D-204ENST00000420101 MXD3Q9BW11 206 aa16.93■□□□□ 0.3
SEMA4D-204ENST00000420101 DUOX1Q9NRD9 1551 aa16.93■□□□□ 0.3
SEMA4D-204ENST00000420101 LTBP1Q14766 1721 aa16.93■□□□□ 0.3
SEMA4D-204ENST00000420101 PPIP5K2O43314 1243 aa16.92■□□□□ 0.3
SEMA4D-204ENST00000420101 PRDM1O75626 825 aa16.92■□□□□ 0.3
SEMA4D-204ENST00000420101 POLR3DP05423 398 aaPredicted RBP16.92■□□□□ 0.3
SEMA4D-204ENST00000420101 USP17L8P0C7I0 530 aa16.92■□□□□ 0.3
SEMA4D-204ENST00000420101 PPP4CP60510 307 aa16.92■□□□□ 0.3
SEMA4D-204ENST00000420101 RAD51AP2Q09MP3 1159 aa16.92■□□□□ 0.3
SEMA4D-204ENST00000420101 WTAPQ15007 396 aa16.92■□□□□ 0.3
SEMA4D-204ENST00000420101 MAPKAPK5Q8IW41 473 aa16.92■□□□□ 0.3
SEMA4D-204ENST00000420101 CEP57L1Q8IYX8 460 aa16.92■□□□□ 0.3
SEMA4D-204ENST00000420101 NKX2-3Q8TAU0 364 aa16.92■□□□□ 0.3
SEMA4D-204ENST00000420101 MTFR1LQ9H019 292 aa16.92■□□□□ 0.3
SEMA4D-204ENST00000420101 RASSF4Q9H2L5 321 aa16.92■□□□□ 0.3
SEMA4D-204ENST00000420101 SUGT1Q9Y2Z0 365 aa16.92■□□□□ 0.3
SEMA4D-204ENST00000420101 MYH15Q9Y2K3 1946 aa16.92■□□□□ 0.3
SEMA4D-204ENST00000420101 SLX4Q8IY92 1834 aa16.92■□□□□ 0.3
SEMA4D-204ENST00000420101 GPR75-ASB3A0A0A6YYF3 556 aa16.91■□□□□ 0.3
SEMA4D-204ENST00000420101 PTPDC1A2A3K4 754 aa16.91■□□□□ 0.3
SEMA4D-204ENST00000420101 EFCAB8A8MWE9 144 aa16.91■□□□□ 0.3
SEMA4D-204ENST00000420101 H3BQV1 296 aa16.91■□□□□ 0.3
SEMA4D-204ENST00000420101 SMIM22K7EJ46 135 aa16.91■□□□□ 0.3
SEMA4D-204ENST00000420101 CYP2D6P10635 497 aa16.91■□□□□ 0.3
SEMA4D-204ENST00000420101 SCNN1DP51172 638 aa16.91■□□□□ 0.3
SEMA4D-204ENST00000420101 PDE4BQ07343 736 aa16.91■□□□□ 0.3
SEMA4D-204ENST00000420101 IFFO2Q5TF58 517 aa16.91■□□□□ 0.3
SEMA4D-204ENST00000420101 CDC37L1Q7L3B6 337 aa16.91■□□□□ 0.3
SEMA4D-204ENST00000420101 C7orf43Q8WVR3 580 aa16.91■□□□□ 0.3
SEMA4D-204ENST00000420101 UBXN4Q92575 508 aa16.91■□□□□ 0.3
SEMA4D-204ENST00000420101 SLC12A7Q9Y666 1083 aa16.91■□□□□ 0.3
SEMA4D-204ENST00000420101 USP27XA6NNY8 438 aa16.91■□□□□ 0.3
SEMA4D-204ENST00000420101 VGLL3A8MV65 326 aa16.91■□□□□ 0.3
SEMA4D-204ENST00000420101 PPFIA3O75145 1194 aa16.91■□□□□ 0.3
SEMA4D-204ENST00000420101 NR1I2O75469 434 aa16.91■□□□□ 0.3
SEMA4D-204ENST00000420101 PLA2G4AP47712 749 aa16.91■□□□□ 0.3
SEMA4D-204ENST00000420101 METAP2P50579 478 aaKnown RBP eCLIP16.91■□□□□ 0.3
SEMA4D-204ENST00000420101 FOSBP53539 338 aa16.91■□□□□ 0.3
SEMA4D-204ENST00000420101 MICU3Q86XE3 530 aa16.91■□□□□ 0.3
SEMA4D-204ENST00000420101 RTKN2Q8IZC4 609 aa16.91■□□□□ 0.3
SEMA4D-204ENST00000420101 IQUBQ8NA54 791 aa16.91■□□□□ 0.3
SEMA4D-204ENST00000420101 IGDCC4Q8TDY8 1250 aa16.91■□□□□ 0.3
SEMA4D-204ENST00000420101 SAP30BPQ9UHR5 308 aaKnown RBP16.91■□□□□ 0.3
SEMA4D-204ENST00000420101 PCP11498 1178 aaKnown RBP16.9■□□□□ 0.3
SEMA4D-204ENST00000420101 EVCP57679 992 aa16.9■□□□□ 0.3
SEMA4D-204ENST00000420101 IRX3P78415 501 aaPredicted RBP16.9■□□□□ 0.3
SEMA4D-204ENST00000420101 GRIPAP1Q4V328 841 aa16.9■□□□□ 0.3
SEMA4D-204ENST00000420101 SBK1Q52WX2 424 aa16.9■□□□□ 0.3
SEMA4D-204ENST00000420101 JAKMIP3Q5VZ66 844 aa16.9■□□□□ 0.3
SEMA4D-204ENST00000420101 FCHSD1Q86WN1 690 aa16.9■□□□□ 0.3
SEMA4D-204ENST00000420101 CERS5Q8N5B7 392 aa16.9■□□□□ 0.3
SEMA4D-204ENST00000420101 NSUN7Q8NE18 718 aaKnown RBP16.9■□□□□ 0.3
SEMA4D-204ENST00000420101 LY9Q9HBG7 655 aa16.9■□□□□ 0.3
SEMA4D-204ENST00000420101 KCNQ5Q9NR82 932 aa16.9■□□□□ 0.3
SEMA4D-204ENST00000420101 ZBTB43O43298 467 aa16.89■□□□□ 0.29
SEMA4D-204ENST00000420101 RXRAP19793 462 aa16.89■□□□□ 0.29
SEMA4D-204ENST00000420101 IQCA1Q86XH1 822 aa16.89■□□□□ 0.29
SEMA4D-204ENST00000420101 MSL3Q8N5Y2 521 aaKnown RBP16.89■□□□□ 0.29
SEMA4D-204ENST00000420101 EXOC4Q96A65 974 aa16.89■□□□□ 0.29
SEMA4D-204ENST00000420101 FAM163AQ96GL9 167 aaPredicted RBP16.89■□□□□ 0.29
SEMA4D-204ENST00000420101 TRIM34Q9BYJ4 488 aa16.89■□□□□ 0.29
SEMA4D-204ENST00000420101 PIM2Q9P1W9 311 aa16.89■□□□□ 0.29
SEMA4D-204ENST00000420101 ORC3Q9UBD5 711 aaPredicted RBP16.89■□□□□ 0.29
SEMA4D-204ENST00000420101 DAGLAQ9Y4D2 1042 aa16.89■□□□□ 0.29
SEMA4D-204ENST00000420101 USP17L3A6NCW0 530 aa16.89■□□□□ 0.29
SEMA4D-204ENST00000420101 USP17L4A6NCW7 530 aa16.89■□□□□ 0.29
SEMA4D-204ENST00000420101 GOLGA8AA7E2F4 631 aa16.89■□□□□ 0.29
SEMA4D-204ENST00000420101 LIFRP42702 1097 aa16.89■□□□□ 0.29
SEMA4D-204ENST00000420101 RBM5P52756 815 aaKnown RBP eCLIP16.89■□□□□ 0.29
SEMA4D-204ENST00000420101 ETF1P62495 437 aaKnown RBP16.89■□□□□ 0.29
SEMA4D-204ENST00000420101 ERCC6LQ2NKX8 1250 aa16.89■□□□□ 0.29
SEMA4D-204ENST00000420101 TPRNQ4KMQ1 711 aa16.89■□□□□ 0.29
SEMA4D-204ENST00000420101 ARHGAP29Q52LW3 1261 aa16.89■□□□□ 0.29
SEMA4D-204ENST00000420101 STRIP1Q5VSL9 837 aa16.89■□□□□ 0.29
SEMA4D-204ENST00000420101 CPLX2Q6PUV4 134 aaKnown RBP16.89■□□□□ 0.29
SEMA4D-204ENST00000420101 APOA5Q6Q788 366 aa16.89■□□□□ 0.29
SEMA4D-204ENST00000420101 USP17L1Q7RTZ2 530 aa16.89■□□□□ 0.29
SEMA4D-204ENST00000420101 TMTC2Q8N394 836 aa16.89■□□□□ 0.29
SEMA4D-204ENST00000420101 GOLGA6L1Q8N7Z2 621 aa16.89■□□□□ 0.29
SEMA4D-204ENST00000420101 GOLGA5Q8TBA6 731 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms