RNA–Protein interactions for RNA: ENST00000419981.1

PTCD1-202, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 533 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-202ENST00000419981 PDE3AQ14432 1141 aa20.96■□□□□ 0.95
PTCD1-202ENST00000419981 CCAR1Q8IX12 1150 aaKnown RBP20.96■□□□□ 0.95
PTCD1-202ENST00000419981 TRIB2Q92519 343 aa20.96■□□□□ 0.95
PTCD1-202ENST00000419981 CRNKL1Q9BZJ0 848 aaKnown RBP20.96■□□□□ 0.95
PTCD1-202ENST00000419981 BCL11AQ9H165 835 aa20.96■□□□□ 0.95
PTCD1-202ENST00000419981 CHMP4BQ9H444 224 aaKnown RBP20.96■□□□□ 0.95
PTCD1-202ENST00000419981 HMX1Q9NP08 348 aaPredicted RBP20.96■□□□□ 0.95
PTCD1-202ENST00000419981 ZBTB40Q9NUA8 1239 aa20.96■□□□□ 0.95
PTCD1-202ENST00000419981 RBPJLQ9UBG7 517 aa20.96■□□□□ 0.95
PTCD1-202ENST00000419981 RAB11FIP3O75154 756 aa20.95■□□□□ 0.94
PTCD1-202ENST00000419981 SHMT1P34896 483 aa20.95■□□□□ 0.94
PTCD1-202ENST00000419981 PLCD1P51178 756 aa20.95■□□□□ 0.94
PTCD1-202ENST00000419981 USP14P54578 494 aa20.95■□□□□ 0.94
PTCD1-202ENST00000419981 TRIM32Q13049 653 aa20.95■□□□□ 0.94
PTCD1-202ENST00000419981 SIRT2Q8IXJ6 389 aa20.95■□□□□ 0.94
PTCD1-202ENST00000419981 ZNF532Q9HCE3 1301 aa20.95■□□□□ 0.94
PTCD1-202ENST00000419981 USP17L15C9J2P7 530 aa20.94■□□□□ 0.94
PTCD1-202ENST00000419981 USP17L13C9JLJ4 530 aa20.94■□□□□ 0.94
PTCD1-202ENST00000419981 USP17L11C9JVI0 530 aa20.94■□□□□ 0.94
PTCD1-202ENST00000419981 USP17L18D6R9N7 530 aa20.94■□□□□ 0.94
PTCD1-202ENST00000419981 USP17L22D6RA61 530 aa20.94■□□□□ 0.94
PTCD1-202ENST00000419981 USP17L17D6RBQ6 530 aa20.94■□□□□ 0.94
PTCD1-202ENST00000419981 USP17L19D6RCP7 530 aa20.94■□□□□ 0.94
PTCD1-202ENST00000419981 USP17L20D6RJB6 530 aa20.94■□□□□ 0.94
PTCD1-202ENST00000419981 USP17L24Q0WX57 530 aa20.94■□□□□ 0.94
PTCD1-202ENST00000419981 Q3C1V9 767 aa20.94■□□□□ 0.94
PTCD1-202ENST00000419981 ANKLE1Q8NAG6 615 aa20.94■□□□□ 0.94
PTCD1-202ENST00000419981 PAWRQ96IZ0 340 aaKnown RBP20.94■□□□□ 0.94
PTCD1-202ENST00000419981 KIAA1683Q9H0B3 1180 aa20.94■□□□□ 0.94
PTCD1-202ENST00000419981 ZNF236Q9UL36 1845 aa20.94■□□□□ 0.94
PTCD1-202ENST00000419981 EVI5O60447 810 aa20.93■□□□□ 0.94
PTCD1-202ENST00000419981 XRCC5P13010 732 aaKnown RBP20.93■□□□□ 0.94
PTCD1-202ENST00000419981 GPR142Q7Z601 462 aa20.93■□□□□ 0.94
PTCD1-202ENST00000419981 NECAB2Q7Z6G3 386 aa20.93■□□□□ 0.94
PTCD1-202ENST00000419981 TRMT44Q8IYL2 757 aaKnown RBP20.93■□□□□ 0.94
PTCD1-202ENST00000419981 PORCNQ9H237 461 aa20.93■□□□□ 0.94
PTCD1-202ENST00000419981 CWC22Q9HCG8 908 aaKnown RBP20.93■□□□□ 0.94
PTCD1-202ENST00000419981 MCM9Q9NXL9 1143 aa20.93■□□□□ 0.94
PTCD1-202ENST00000419981 PLXNA1Q9UIW2 1896 aa20.92■□□□□ 0.94
PTCD1-202ENST00000419981 MYH4Q9Y623 1939 aa20.92■□□□□ 0.94
PTCD1-202ENST00000419981 TCRBV5S4A2TA0A5A2 114 aa20.92■□□□□ 0.94
PTCD1-202ENST00000419981 ZKSCAN1P17029 563 aaPredicted RBP20.92■□□□□ 0.94
PTCD1-202ENST00000419981 VCAM1P19320 739 aa20.92■□□□□ 0.94
PTCD1-202ENST00000419981 RGS2P41220 211 aa20.92■□□□□ 0.94
PTCD1-202ENST00000419981 GABPAQ06546 454 aa20.92■□□□□ 0.94
PTCD1-202ENST00000419981 CATSPERGQ6ZRH7 1159 aa20.92■□□□□ 0.94
PTCD1-202ENST00000419981 PLEKHH3Q7Z736 793 aa20.92■□□□□ 0.94
PTCD1-202ENST00000419981 LCORLQ8N3X6 602 aa20.92■□□□□ 0.94
PTCD1-202ENST00000419981 ACER1Q8TDN7 264 aa20.92■□□□□ 0.94
PTCD1-202ENST00000419981 DIS3LQ8TF46 1054 aaKnown RBP20.92■□□□□ 0.94
PTCD1-202ENST00000419981 RBM27Q9P2N5 1060 aaKnown RBP20.92■□□□□ 0.94
PTCD1-202ENST00000419981 RCAN3Q9UKA8 241 aa20.92■□□□□ 0.94
PTCD1-202ENST00000419981 RABGAP1Q9Y3P9 1069 aa20.92■□□□□ 0.94
PTCD1-202ENST00000419981 PRKAR2AP13861 404 aaKnown RBP20.91■□□□□ 0.94
PTCD1-202ENST00000419981 CCNA1P78396 465 aa20.91■□□□□ 0.94
PTCD1-202ENST00000419981 MAP3K21Q5TCX8 1036 aa20.91■□□□□ 0.94
PTCD1-202ENST00000419981 POTEEQ6S8J3 1075 aa20.91■□□□□ 0.94
PTCD1-202ENST00000419981 SDR42E1Q8WUS8 393 aa20.91■□□□□ 0.94
PTCD1-202ENST00000419981 EDC3Q96F86 508 aaKnown RBP20.91■□□□□ 0.94
PTCD1-202ENST00000419981 DCP1AQ9NPI6 582 aaPredicted RBP20.91■□□□□ 0.94
PTCD1-202ENST00000419981 PAG1Q9NWQ8 432 aa20.91■□□□□ 0.94
PTCD1-202ENST00000419981 GUCY1A2P33402 732 aa20.9■□□□□ 0.94
PTCD1-202ENST00000419981 SEPT2Q15019 361 aa20.9■□□□□ 0.94
PTCD1-202ENST00000419981 MORN1Q5T089 497 aa20.9■□□□□ 0.94
PTCD1-202ENST00000419981 USP6NLQ92738 828 aa20.9■□□□□ 0.94
PTCD1-202ENST00000419981 APBA2Q99767 749 aa20.9■□□□□ 0.94
PTCD1-202ENST00000419981 BOLA2Q9H3K6 86 aa20.9■□□□□ 0.94
PTCD1-202ENST00000419981 GREB1LQ9C091 1923 aaPredicted RBP20.89■□□□□ 0.93
PTCD1-202ENST00000419981 MPHOSPH10O00566 681 aaKnown RBP20.89■□□□□ 0.93
PTCD1-202ENST00000419981 CNMDO75829 334 aa20.89■□□□□ 0.93
PTCD1-202ENST00000419981 EVX2Q03828 476 aa20.89■□□□□ 0.93
PTCD1-202ENST00000419981 LBX2Q6XYB7 198 aa20.89■□□□□ 0.93
PTCD1-202ENST00000419981 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.89■□□□□ 0.93
PTCD1-202ENST00000419981 RPAP3Q9H6T3 665 aaPredicted RBP20.89■□□□□ 0.93
PTCD1-202ENST00000419981 ARMT1Q9H993 441 aa20.89■□□□□ 0.93
PTCD1-202ENST00000419981 GLRX3O76003 335 aaKnown RBP20.88■□□□□ 0.93
PTCD1-202ENST00000419981 ATP5JP18859 108 aa20.88■□□□□ 0.93
PTCD1-202ENST00000419981 ADD2P35612 726 aa20.88■□□□□ 0.93
PTCD1-202ENST00000419981 CCL14Q16627 93 aa20.88■□□□□ 0.93
PTCD1-202ENST00000419981 WDR78Q5VTH9 848 aa20.88■□□□□ 0.93
PTCD1-202ENST00000419981 NBPF3Q9H094 633 aa20.88■□□□□ 0.93
PTCD1-202ENST00000419981 PRO3102Q9H379 93 aa20.88■□□□□ 0.93
PTCD1-202ENST00000419981 OGDHLQ9ULD0 1010 aa20.88■□□□□ 0.93
PTCD1-202ENST00000419981 SPDYE16A6NNV3 312 aaPredicted RBP20.87■□□□□ 0.93
PTCD1-202ENST00000419981 MBD4O95243 580 aa20.87■□□□□ 0.93
PTCD1-202ENST00000419981 CYP2D6P10635 497 aa20.87■□□□□ 0.93
PTCD1-202ENST00000419981 CACNB2Q08289 660 aaPredicted RBP20.87■□□□□ 0.93
PTCD1-202ENST00000419981 MAP2K5Q13163 448 aa20.87■□□□□ 0.93
PTCD1-202ENST00000419981 HAUS7Q99871 368 aa20.87■□□□□ 0.93
PTCD1-202ENST00000419981 C11orf49Q9H6J7 331 aa20.87■□□□□ 0.93
PTCD1-202ENST00000419981 SWAP70Q9UH65 585 aa20.87■□□□□ 0.93
PTCD1-202ENST00000419981 MNX1P50219 401 aaPredicted RBP20.86■□□□□ 0.93
PTCD1-202ENST00000419981 TMEM179Q6ZVK1 233 aa20.86■□□□□ 0.93
PTCD1-202ENST00000419981 SLC44A5Q8NCS7 719 aa20.86■□□□□ 0.93
PTCD1-202ENST00000419981 ATP8A2Q9NTI2 1148 aa20.86■□□□□ 0.93
PTCD1-202ENST00000419981 BTBD7Q9P203 1132 aa20.86■□□□□ 0.93
PTCD1-202ENST00000419981 IVNS1ABPQ9Y6Y0 642 aa20.86■□□□□ 0.93
PTCD1-202ENST00000419981 A0A1W2PRG0 241 aa20.85■□□□□ 0.93
PTCD1-202ENST00000419981 SLC15A5A6NIM6 579 aa20.85■□□□□ 0.93
PTCD1-202ENST00000419981 PRKAB2O43741 272 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms