RNA–Protein interactions for RNA: ENST00000419499.1

LINC00402-201, long intergenic non-protein coding RNA 402, humanhuman

TSL 2 BASIC

Gene LINC00402, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00402-201ENST00000419499 EARS2Q5JPH6 523 aaKnown RBP11.29□□□□□ -0.6
LINC00402-201ENST00000419499 NUP133Q8WUM0 1156 aa11.29□□□□□ -0.6
LINC00402-201ENST00000419499 DNAJC25Q9H1X3 360 aa11.29□□□□□ -0.6
LINC00402-201ENST00000419499 KINO60870 393 aaKnown RBP11.29□□□□□ -0.6
LINC00402-201ENST00000419499 APBA3O96018 575 aa11.29□□□□□ -0.6
LINC00402-201ENST00000419499 RILPL1Q5EBL4 403 aa11.29□□□□□ -0.6
LINC00402-201ENST00000419499 SARM1Q6SZW1 724 aa11.29□□□□□ -0.6
LINC00402-201ENST00000419499 OLFM4Q6UX06 510 aa11.29□□□□□ -0.6
LINC00402-201ENST00000419499 TGFBRAP1Q8WUH2 860 aa11.29□□□□□ -0.6
LINC00402-201ENST00000419499 BPIFA3Q9BQP9 254 aa11.29□□□□□ -0.6
LINC00402-201ENST00000419499 MAD2L2Q9UI95 211 aa11.29□□□□□ -0.6
LINC00402-201ENST00000419499 DAGLAQ9Y4D2 1042 aa11.29□□□□□ -0.6
LINC00402-201ENST00000419499 M0R2N6 131 aa11.28□□□□□ -0.6
LINC00402-201ENST00000419499 LDHCP07864 332 aa11.28□□□□□ -0.6
LINC00402-201ENST00000419499 GABPAQ06546 454 aa11.28□□□□□ -0.6
LINC00402-201ENST00000419499 GRM4Q14833 912 aa11.28□□□□□ -0.6
LINC00402-201ENST00000419499 TUBE1Q9UJT0 475 aa11.28□□□□□ -0.6
LINC00402-201ENST00000419499 CUTAO60888 179 aa11.28□□□□□ -0.6
LINC00402-201ENST00000419499 MMP10P09238 476 aa11.28□□□□□ -0.6
LINC00402-201ENST00000419499 PFKFB3Q16875 520 aaPredicted RBP11.28□□□□□ -0.6
LINC00402-201ENST00000419499 WNT7AO00755 349 aa11.27□□□□□ -0.6
LINC00402-201ENST00000419499 ZNF202O95125 648 aa11.27□□□□□ -0.6
LINC00402-201ENST00000419499 PTPREP23469 700 aa11.27□□□□□ -0.6
LINC00402-201ENST00000419499 USP5P45974 858 aa11.27□□□□□ -0.6
LINC00402-201ENST00000419499 ZNF579Q8NAF0 562 aaKnown RBP11.27□□□□□ -0.6
LINC00402-201ENST00000419499 SLC44A5Q8NCS7 719 aa11.27□□□□□ -0.6
LINC00402-201ENST00000419499 MASTLQ96GX5 879 aa11.27□□□□□ -0.6
LINC00402-201ENST00000419499 ANO8Q9HCE9 1232 aaPredicted RBP11.27□□□□□ -0.6
LINC00402-201ENST00000419499 VPS54Q9P1Q0 977 aa11.27□□□□□ -0.6
LINC00402-201ENST00000419499 KIAA1468Q9P260 1216 aa11.27□□□□□ -0.6
LINC00402-201ENST00000419499 PDE6BP35913 854 aa11.27□□□□□ -0.61
LINC00402-201ENST00000419499 SASS6Q6UVJ0 657 aa11.27□□□□□ -0.61
LINC00402-201ENST00000419499 PCDHB6Q9Y5E3 794 aa11.27□□□□□ -0.61
LINC00402-201ENST00000419499 FAM205CA6NFA0 338 aa11.27□□□□□ -0.61
LINC00402-201ENST00000419499 TSPY2A6NKD2 308 aa11.27□□□□□ -0.61
LINC00402-201ENST00000419499 ADAMTS3O15072 1205 aa11.27□□□□□ -0.61
LINC00402-201ENST00000419499 PLCG2P16885 1265 aa11.27□□□□□ -0.61
LINC00402-201ENST00000419499 MARCKSP29966 332 aaPredicted RBP11.27□□□□□ -0.61
LINC00402-201ENST00000419499 ZNF165P49910 485 aa11.27□□□□□ -0.61
LINC00402-201ENST00000419499 MDM2Q00987 491 aaPredicted RBP11.27□□□□□ -0.61
LINC00402-201ENST00000419499 TFAP4Q01664 338 aa11.27□□□□□ -0.61
LINC00402-201ENST00000419499 GRIN1Q05586 938 aa11.27□□□□□ -0.61
LINC00402-201ENST00000419499 MAPKAPK5Q8IW41 473 aa11.27□□□□□ -0.61
LINC00402-201ENST00000419499 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.27□□□□□ -0.61
LINC00402-201ENST00000419499 COL4A5P29400 1685 aa11.26□□□□□ -0.61
LINC00402-201ENST00000419499 IGKV6D-41A0A0C4DH26 115 aa11.26□□□□□ -0.61
LINC00402-201ENST00000419499 VEGFAP15692 232 aaPredicted RBP11.26□□□□□ -0.61
LINC00402-201ENST00000419499 AEBP2Q6ZN18 517 aaPredicted RBP11.26□□□□□ -0.61
LINC00402-201ENST00000419499 JMYQ8N9B5 988 aa11.26□□□□□ -0.61
LINC00402-201ENST00000419499 CLIC6Q96NY7 704 aa11.26□□□□□ -0.61
LINC00402-201ENST00000419499 CDC25BP30305 580 aa11.26□□□□□ -0.61
LINC00402-201ENST00000419499 ALDH1B1P30837 517 aa11.26□□□□□ -0.61
LINC00402-201ENST00000419499 CCDC82Q8N4S0 544 aa11.26□□□□□ -0.61
LINC00402-201ENST00000419499 PNMA1Q8ND90 353 aa11.26□□□□□ -0.61
LINC00402-201ENST00000419499 KCNF1Q9H3M0 494 aa11.26□□□□□ -0.61
LINC00402-201ENST00000419499 MYO3BQ8WXR4 1341 aa11.26□□□□□ -0.61
LINC00402-201ENST00000419499 USP17L3A6NCW0 530 aa11.25□□□□□ -0.61
LINC00402-201ENST00000419499 USP17L4A6NCW7 530 aa11.25□□□□□ -0.61
LINC00402-201ENST00000419499 PALM3A6NDB9 673 aaPredicted RBP11.25□□□□□ -0.61
LINC00402-201ENST00000419499 CYTH3O43739 400 aa11.25□□□□□ -0.61
LINC00402-201ENST00000419499 SCG2P13521 617 aa11.25□□□□□ -0.61
LINC00402-201ENST00000419499 KRT2P35908 639 aa11.25□□□□□ -0.61
LINC00402-201ENST00000419499 FKBP1AP62942 108 aaKnown RBP11.25□□□□□ -0.61
LINC00402-201ENST00000419499 CCDC178Q5BJE1 867 aa11.25□□□□□ -0.61
LINC00402-201ENST00000419499 STYK1Q6J9G0 422 aa11.25□□□□□ -0.61
LINC00402-201ENST00000419499 USP17L1Q7RTZ2 530 aa11.25□□□□□ -0.61
LINC00402-201ENST00000419499 METTL16Q86W50 562 aaKnown RBP11.25□□□□□ -0.61
LINC00402-201ENST00000419499 KRI1Q8N9T8 703 aaKnown RBP11.25□□□□□ -0.61
LINC00402-201ENST00000419499 C7orf43Q8WVR3 580 aa11.25□□□□□ -0.61
LINC00402-201ENST00000419499 CAMKK2Q96RR4 588 aa11.25□□□□□ -0.61
LINC00402-201ENST00000419499 SH3GLB2Q9NR46 395 aa11.25□□□□□ -0.61
LINC00402-201ENST00000419499 SRPRBQ9Y5M8 271 aaKnown RBP11.25□□□□□ -0.61
LINC00402-201ENST00000419499 V9GY48 417 aaPredicted RBP11.25□□□□□ -0.61
LINC00402-201ENST00000419499 CDK8P49336 464 aa11.25□□□□□ -0.61
LINC00402-201ENST00000419499 DPCR1Q3MIW9 517 aa11.25□□□□□ -0.61
LINC00402-201ENST00000419499 NOM1Q5C9Z4 860 aaKnown RBP11.25□□□□□ -0.61
LINC00402-201ENST00000419499 NT5DC1Q5TFE4 455 aa11.25□□□□□ -0.61
LINC00402-201ENST00000419499 SLF2Q8IX21 1173 aa11.25□□□□□ -0.61
LINC00402-201ENST00000419499 TEX11Q8IYF3 940 aa11.25□□□□□ -0.61
LINC00402-201ENST00000419499 NEDD1Q8NHV4 660 aa11.25□□□□□ -0.61
LINC00402-201ENST00000419499 HSD3B7Q9H2F3 369 aa11.25□□□□□ -0.61
LINC00402-201ENST00000419499 COL2A1P02458 1487 aaPredicted RBP11.25□□□□□ -0.61
LINC00402-201ENST00000419499 A0A087WWV3 80 aa11.25□□□□□ -0.61
LINC00402-201ENST00000419499 RXRBP28702 533 aa11.25□□□□□ -0.61
LINC00402-201ENST00000419499 SAFBQ15424 915 aaKnown RBP eCLIP11.25□□□□□ -0.61
LINC00402-201ENST00000419499 SLC4A8Q2Y0W8 1093 aa11.25□□□□□ -0.61
LINC00402-201ENST00000419499 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.25□□□□□ -0.61
LINC00402-201ENST00000419499 STAG2Q8N3U4 1231 aa11.25□□□□□ -0.61
LINC00402-201ENST00000419499 MPNDQ8N594 471 aa11.25□□□□□ -0.61
LINC00402-201ENST00000419499 CTCFLQ8NI51 663 aaPredicted RBP11.25□□□□□ -0.61
LINC00402-201ENST00000419499 ERCC4Q92889 916 aaPredicted RBP11.25□□□□□ -0.61
LINC00402-201ENST00000419499 DDX4Q9NQI0 724 aaKnown RBP11.25□□□□□ -0.61
LINC00402-201ENST00000419499 BAZ2BQ9UIF8 2168 aaKnown RBP11.24□□□□□ -0.61
LINC00402-201ENST00000419499 hCG_1642624A0A1W2PR95 340 aa11.24□□□□□ -0.61
LINC00402-201ENST00000419499 GTF2IP78347 998 aa11.24□□□□□ -0.61
LINC00402-201ENST00000419499 TYW1BQ6NUM6 668 aa11.24□□□□□ -0.61
LINC00402-201ENST00000419499 FAM177A1Q8N128 213 aaPredicted RBP11.24□□□□□ -0.61
LINC00402-201ENST00000419499 DAGLBQ8NCG7 672 aa11.24□□□□□ -0.61
LINC00402-201ENST00000419499 TMEM47Q9BQJ4 181 aa11.24□□□□□ -0.61
LINC00402-201ENST00000419499 ANO10Q9NW15 660 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms