RNA–Protein interactions for RNA: ENST00000419007.5

SEMA3B-203, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 3,283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-203ENST00000419007 DZIP3Q86Y13 1208 aaKnown RBP17.25■□□□□ 0.35
SEMA3B-203ENST00000419007 BTG4Q9NY30 223 aa17.25■□□□□ 0.35
SEMA3B-203ENST00000419007 XBP1P17861 261 aa17.25■□□□□ 0.35
SEMA3B-203ENST00000419007 FILIP1LQ4L180 1135 aa17.25■□□□□ 0.35
SEMA3B-203ENST00000419007 SYMPKQ92797 1274 aaKnown RBP17.25■□□□□ 0.35
SEMA3B-203ENST00000419007 BAZ2BQ9UIF8 2168 aaKnown RBP17.25■□□□□ 0.35
SEMA3B-203ENST00000419007 LTBP4Q8N2S1 1624 aa17.24■□□□□ 0.35
SEMA3B-203ENST00000419007 A0A1B0GTH6 734 aa17.24■□□□□ 0.35
SEMA3B-203ENST00000419007 CASP14P31944 242 aa17.24■□□□□ 0.35
SEMA3B-203ENST00000419007 HNRNPH2P55795 449 aaKnown RBP17.24■□□□□ 0.35
SEMA3B-203ENST00000419007 CHMP4BP1P59074 171 aa17.24■□□□□ 0.35
SEMA3B-203ENST00000419007 EARS2Q5JPH6 523 aaKnown RBP17.24■□□□□ 0.35
SEMA3B-203ENST00000419007 V9GY48 417 aaPredicted RBP17.24■□□□□ 0.35
SEMA3B-203ENST00000419007 TNKSO95271 1327 aa17.24■□□□□ 0.35
SEMA3B-203ENST00000419007 CYP7A1P22680 504 aa17.24■□□□□ 0.35
SEMA3B-203ENST00000419007 ERCC5P28715 1186 aaPredicted RBP17.24■□□□□ 0.35
SEMA3B-203ENST00000419007 ZNF579Q8NAF0 562 aaKnown RBP17.24■□□□□ 0.35
SEMA3B-203ENST00000419007 STAG1Q8WVM7 1258 aa17.24■□□□□ 0.35
SEMA3B-203ENST00000419007 RABGGTAQ92696 567 aa17.24■□□□□ 0.35
SEMA3B-203ENST00000419007 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.24■□□□□ 0.35
SEMA3B-203ENST00000419007 MROH5Q6ZUA9 1318 aa17.24■□□□□ 0.35
SEMA3B-203ENST00000419007 PPARAQ07869 468 aa17.23■□□□□ 0.35
SEMA3B-203ENST00000419007 MCM6Q14566 821 aa17.23■□□□□ 0.35
SEMA3B-203ENST00000419007 SPATA1Q5VX52 437 aa17.23■□□□□ 0.35
SEMA3B-203ENST00000419007 TMTC2Q8N394 836 aa17.23■□□□□ 0.35
SEMA3B-203ENST00000419007 BLZF1Q9H2G9 400 aa17.23■□□□□ 0.35
SEMA3B-203ENST00000419007 ADGRG1Q9Y653 693 aa17.23■□□□□ 0.35
SEMA3B-203ENST00000419007 TFRCP02786 760 aaKnown RBP17.23■□□□□ 0.35
SEMA3B-203ENST00000419007 RSRC2Q7L4I2 434 aaKnown RBP17.23■□□□□ 0.35
SEMA3B-203ENST00000419007 PAGE5Q96GU1 130 aa17.23■□□□□ 0.35
SEMA3B-203ENST00000419007 RNF41Q9H4P4 317 aaPredicted RBP17.23■□□□□ 0.35
SEMA3B-203ENST00000419007 CTNND2Q9UQB3 1225 aa17.23■□□□□ 0.35
SEMA3B-203ENST00000419007 PLEKHG2Q9H7P9 1386 aa17.23■□□□□ 0.35
SEMA3B-203ENST00000419007 TNS2Q63HR2 1409 aa17.23■□□□□ 0.35
SEMA3B-203ENST00000419007 CYP2D7A0A087X1C5 515 aa17.22■□□□□ 0.35
SEMA3B-203ENST00000419007 FGFR2P21802 821 aa17.22■□□□□ 0.35
SEMA3B-203ENST00000419007 TXLNAP40222 546 aa17.22■□□□□ 0.35
SEMA3B-203ENST00000419007 LONRF2Q1L5Z9 754 aa17.22■□□□□ 0.35
SEMA3B-203ENST00000419007 NOM1Q5C9Z4 860 aaKnown RBP17.22■□□□□ 0.35
SEMA3B-203ENST00000419007 ELOA2Q8IYF1 753 aaPredicted RBP17.22■□□□□ 0.35
SEMA3B-203ENST00000419007 KRT2P35908 639 aa17.22■□□□□ 0.35
SEMA3B-203ENST00000419007 ACRBPQ8NEB7 543 aa17.22■□□□□ 0.35
SEMA3B-203ENST00000419007 PANX2Q96RD6 677 aa17.22■□□□□ 0.35
SEMA3B-203ENST00000419007 VPS16Q9H269 839 aa17.22■□□□□ 0.35
SEMA3B-203ENST00000419007 MAPK8IP1Q9UQF2 711 aa17.22■□□□□ 0.35
SEMA3B-203ENST00000419007 PES1O00541 588 aaKnown RBP17.22■□□□□ 0.35
SEMA3B-203ENST00000419007 WNT7AO00755 349 aa17.22■□□□□ 0.35
SEMA3B-203ENST00000419007 N4BP3O15049 544 aa17.22■□□□□ 0.35
SEMA3B-203ENST00000419007 GNAT2P19087 354 aa17.22■□□□□ 0.35
SEMA3B-203ENST00000419007 CERKQ8TCT0 537 aa17.22■□□□□ 0.35
SEMA3B-203ENST00000419007 ESR2Q92731 530 aa17.22■□□□□ 0.35
SEMA3B-203ENST00000419007 UBR2Q8IWV8 1755 aa17.21■□□□□ 0.35
SEMA3B-203ENST00000419007 PLEKHA8P1O95397 391 aa17.21■□□□□ 0.35
SEMA3B-203ENST00000419007 RHOXF2BP0C7M4 288 aa17.21■□□□□ 0.35
SEMA3B-203ENST00000419007 SLC4A9Q96Q91 983 aa17.21■□□□□ 0.35
SEMA3B-203ENST00000419007 CDC5LQ99459 802 aaKnown RBP17.21■□□□□ 0.35
SEMA3B-203ENST00000419007 RHOXF2Q9BQY4 288 aa17.21■□□□□ 0.35
SEMA3B-203ENST00000419007 COL5A2P05997 1499 aaPredicted RBP17.21■□□□□ 0.35
SEMA3B-203ENST00000419007 CYP19A1P11511 503 aaPredicted RBP17.21■□□□□ 0.35
SEMA3B-203ENST00000419007 CDC25AP30304 524 aa17.21■□□□□ 0.35
SEMA3B-203ENST00000419007 FXR1P51114 621 aaKnown RBP eCLIP17.21■□□□□ 0.35
SEMA3B-203ENST00000419007 GPS2Q13227 327 aa17.21■□□□□ 0.35
SEMA3B-203ENST00000419007 DDX60Q8IY21 1712 aaKnown RBP17.21■□□□□ 0.35
SEMA3B-203ENST00000419007 FUT8Q9BYC5 575 aa17.21■□□□□ 0.35
SEMA3B-203ENST00000419007 ADD3Q9UEY8 706 aaKnown RBP17.21■□□□□ 0.35
SEMA3B-203ENST00000419007 RRAGBQ5VZM2 374 aa17.2■□□□□ 0.34
SEMA3B-203ENST00000419007 SRGAP1Q7Z6B7 1085 aa17.2■□□□□ 0.34
SEMA3B-203ENST00000419007 SHISA4Q96DD7 197 aa17.2■□□□□ 0.34
SEMA3B-203ENST00000419007 NUP88Q99567 741 aaPredicted RBP17.2■□□□□ 0.34
SEMA3B-203ENST00000419007 AATFQ9NY61 560 aaKnown RBP eCLIP17.2■□□□□ 0.34
SEMA3B-203ENST00000419007 ATP8B1O43520 1251 aa17.2■□□□□ 0.34
SEMA3B-203ENST00000419007 IFIT1BQ5T764 474 aaKnown RBP17.2■□□□□ 0.34
SEMA3B-203ENST00000419007 JAKMIP3Q5VZ66 844 aa17.2■□□□□ 0.34
SEMA3B-203ENST00000419007 ECM29Q5VYK3 1845 aa17.2■□□□□ 0.34
SEMA3B-203ENST00000419007 PARP4Q9UKK3 1724 aaKnown RBP17.2■□□□□ 0.34
SEMA3B-203ENST00000419007 MFAP3LO75121 409 aa17.2■□□□□ 0.34
SEMA3B-203ENST00000419007 FAM193AP78312 1265 aa17.2■□□□□ 0.34
SEMA3B-203ENST00000419007 SLC35F6Q8N357 371 aa17.2■□□□□ 0.34
SEMA3B-203ENST00000419007 SPATA20Q8TB22 786 aa17.2■□□□□ 0.34
SEMA3B-203ENST00000419007 CTAGE1Q96RT6 745 aa17.2■□□□□ 0.34
SEMA3B-203ENST00000419007 RNF26Q9BY78 433 aaPredicted RBP17.2■□□□□ 0.34
SEMA3B-203ENST00000419007 ABL1P00519 1130 aa17.19■□□□□ 0.34
SEMA3B-203ENST00000419007 APTXQ7Z2E3 356 aaKnown RBP17.19■□□□□ 0.34
SEMA3B-203ENST00000419007 CATIPQ7Z7H3 387 aa17.19■□□□□ 0.34
SEMA3B-203ENST00000419007 ADGRA1Q86SQ6 560 aa17.19■□□□□ 0.34
SEMA3B-203ENST00000419007 BRMS1Q9HCU9 246 aa17.19■□□□□ 0.34
SEMA3B-203ENST00000419007 CTAGE9A4FU28 777 aa17.19■□□□□ 0.34
SEMA3B-203ENST00000419007 LMAN1P49257 510 aa17.19■□□□□ 0.34
SEMA3B-203ENST00000419007 PTGDRQ13258 359 aa17.19■□□□□ 0.34
SEMA3B-203ENST00000419007 CUL4BQ13620 913 aa17.19■□□□□ 0.34
SEMA3B-203ENST00000419007 SUSD4Q5VX71 490 aa17.19■□□□□ 0.34
SEMA3B-203ENST00000419007 ENAHQ8N8S7 591 aaPredicted RBP17.19■□□□□ 0.34
SEMA3B-203ENST00000419007 TAB2Q9NYJ8 693 aa17.19■□□□□ 0.34
SEMA3B-203ENST00000419007 CDC23Q9UJX2 597 aa17.19■□□□□ 0.34
SEMA3B-203ENST00000419007 GYPCP04921 128 aa17.18■□□□□ 0.34
SEMA3B-203ENST00000419007 IGHMBP2P38935 993 aaKnown RBP17.18■□□□□ 0.34
SEMA3B-203ENST00000419007 WWC2Q6AWC2 1192 aa17.18■□□□□ 0.34
SEMA3B-203ENST00000419007 MAGEB6P1A0A0J9YX57 407 aa17.18■□□□□ 0.34
SEMA3B-203ENST00000419007 DPYDQ12882 1025 aa17.18■□□□□ 0.34
SEMA3B-203ENST00000419007 TTC38Q5R3I4 469 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms