RNA–Protein interactions for RNA: ENST00000418527.1

NPHP1-205, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-205ENST00000418527 SH2B2O14492 632 aaPredicted RBP12.52□□□□□ -0.41
NPHP1-205ENST00000418527 FGRP09769 529 aa12.52□□□□□ -0.41
NPHP1-205ENST00000418527 TSPY3P0CV98 308 aa12.52□□□□□ -0.41
NPHP1-205ENST00000418527 TSPY8P0CW00 308 aa12.52□□□□□ -0.41
NPHP1-205ENST00000418527 LMOD1P29536 600 aaPredicted RBP12.52□□□□□ -0.41
NPHP1-205ENST00000418527 CDK8P49336 464 aa12.52□□□□□ -0.41
NPHP1-205ENST00000418527 PLCD1P51178 756 aa12.52□□□□□ -0.41
NPHP1-205ENST00000418527 PRELPP51888 382 aa12.52□□□□□ -0.41
NPHP1-205ENST00000418527 CACNB3P54284 484 aa12.52□□□□□ -0.41
NPHP1-205ENST00000418527 ANTXR2P58335 489 aa12.52□□□□□ -0.41
NPHP1-205ENST00000418527 NFIAQ12857 509 aa12.52□□□□□ -0.41
NPHP1-205ENST00000418527 STK3Q13188 491 aa12.52□□□□□ -0.41
NPHP1-205ENST00000418527 C9orf131Q5VYM1 1079 aa12.52□□□□□ -0.41
NPHP1-205ENST00000418527 C16orf86Q6ZW13 317 aa12.52□□□□□ -0.41
NPHP1-205ENST00000418527 CCDC83Q8IWF9 413 aa12.52□□□□□ -0.41
NPHP1-205ENST00000418527 DYNLL2Q96FJ2 89 aa12.52□□□□□ -0.41
NPHP1-205ENST00000418527 ZNF274Q96GC6 653 aaPredicted RBP12.52□□□□□ -0.41
NPHP1-205ENST00000418527 AGXT2Q9BYV1 514 aa12.52□□□□□ -0.41
NPHP1-205ENST00000418527 DDX4Q9NQI0 724 aaKnown RBP12.52□□□□□ -0.41
NPHP1-205ENST00000418527 PI4KBQ9UBF8 816 aa12.52□□□□□ -0.41
NPHP1-205ENST00000418527 SERPINB13Q9UIV8 391 aa12.52□□□□□ -0.41
NPHP1-205ENST00000418527 LHX6Q9UPM6 363 aa12.52□□□□□ -0.41
NPHP1-205ENST00000418527 SMC3Q9UQE7 1217 aa12.52□□□□□ -0.41
NPHP1-205ENST00000418527 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.52□□□□□ -0.41
NPHP1-205ENST00000418527 PCDHGA4Q9Y5G9 962 aa12.52□□□□□ -0.41
NPHP1-205ENST00000418527 PCDHAC2Q9Y5I4 1007 aa12.52□□□□□ -0.41
NPHP1-205ENST00000418527 ZNF541Q9H0D2 1346 aa12.52□□□□□ -0.41
NPHP1-205ENST00000418527 SBF1O95248 1867 aa12.51□□□□□ -0.41
NPHP1-205ENST00000418527 GOLGA8BA8MQT2 603 aa12.51□□□□□ -0.41
NPHP1-205ENST00000418527 TCP10L2B9ZVM9 353 aa12.51□□□□□ -0.41
NPHP1-205ENST00000418527 DHX16O60231 1041 aaKnown RBP12.51□□□□□ -0.41
NPHP1-205ENST00000418527 PBX2P40425 430 aa12.51□□□□□ -0.41
NPHP1-205ENST00000418527 LIFRP42702 1097 aa12.51□□□□□ -0.41
NPHP1-205ENST00000418527 TFAP4Q01664 338 aa12.51□□□□□ -0.41
NPHP1-205ENST00000418527 TNFAIP1Q13829 316 aa12.51□□□□□ -0.41
NPHP1-205ENST00000418527 ME3Q16798 604 aa12.51□□□□□ -0.41
NPHP1-205ENST00000418527 FKBP1CQ5VVH2 108 aa12.51□□□□□ -0.41
NPHP1-205ENST00000418527 CPLX2Q6PUV4 134 aaKnown RBP12.51□□□□□ -0.41
NPHP1-205ENST00000418527 ZSCAN10Q96SZ4 725 aaPredicted RBP12.51□□□□□ -0.41
NPHP1-205ENST00000418527 ZKSCAN3Q9BRR0 538 aa12.51□□□□□ -0.41
NPHP1-205ENST00000418527 CHMP5Q9NZZ3 219 aa12.51□□□□□ -0.41
NPHP1-205ENST00000418527 FAM198AQ9UFP1 575 aa12.51□□□□□ -0.41
NPHP1-205ENST00000418527 SLC12A7Q9Y666 1083 aa12.51□□□□□ -0.41
NPHP1-205ENST00000418527 CPLX1O14810 134 aa12.5□□□□□ -0.41
NPHP1-205ENST00000418527 ZBTB43O43298 467 aa12.5□□□□□ -0.41
NPHP1-205ENST00000418527 PFKFB2O60825 505 aa12.5□□□□□ -0.41
NPHP1-205ENST00000418527 COL9A3Q14050 684 aaPredicted RBP12.5□□□□□ -0.41
NPHP1-205ENST00000418527 KIF4BQ2VIQ3 1234 aa12.5□□□□□ -0.41
NPHP1-205ENST00000418527 FAM47AQ5JRC9 791 aa12.5□□□□□ -0.41
NPHP1-205ENST00000418527 IFIT1BQ5T764 474 aaKnown RBP12.5□□□□□ -0.41
NPHP1-205ENST00000418527 FOXP4Q8IVH2 680 aaPredicted RBP12.5□□□□□ -0.41
NPHP1-205ENST00000418527 NECAB1Q8N987 351 aa12.5□□□□□ -0.41
NPHP1-205ENST00000418527 IGDCC4Q8TDY8 1250 aa12.5□□□□□ -0.41
NPHP1-205ENST00000418527 PTCD2Q8WV60 388 aaKnown RBP12.5□□□□□ -0.41
NPHP1-205ENST00000418527 FAM151AQ8WW52 585 aa12.5□□□□□ -0.41
NPHP1-205ENST00000418527 EHD4Q9H223 541 aa12.5□□□□□ -0.41
NPHP1-205ENST00000418527 KIF3AQ9Y496 699 aa12.5□□□□□ -0.41
NPHP1-205ENST00000418527 TACC3Q9Y6A5 838 aa12.5□□□□□ -0.41
NPHP1-205ENST00000418527 TNKSO95271 1327 aa12.5□□□□□ -0.41
NPHP1-205ENST00000418527 SMIM22K7EJ46 135 aa12.49□□□□□ -0.41
NPHP1-205ENST00000418527 WNT10BO00744 389 aa12.49□□□□□ -0.41
NPHP1-205ENST00000418527 TBC1D12O60347 775 aa12.49□□□□□ -0.41
NPHP1-205ENST00000418527 LARGE1O95461 756 aa12.49□□□□□ -0.41
NPHP1-205ENST00000418527 PDIA3P30101 505 aaKnown RBP12.49□□□□□ -0.41
NPHP1-205ENST00000418527 METAP2P50579 478 aaKnown RBP eCLIP12.49□□□□□ -0.41
NPHP1-205ENST00000418527 TBC1D10BQ4KMP7 808 aaPredicted RBP12.49□□□□□ -0.41
NPHP1-205ENST00000418527 PPP4R3BQ5MIZ7 849 aa12.49□□□□□ -0.41
NPHP1-205ENST00000418527 CATIPQ7Z7H3 387 aa12.49□□□□□ -0.41
NPHP1-205ENST00000418527 FAM83AQ86UY5 434 aa12.49□□□□□ -0.41
NPHP1-205ENST00000418527 GTF3C6Q969F1 213 aa12.49□□□□□ -0.41
NPHP1-205ENST00000418527 LY9Q9HBG7 655 aa12.49□□□□□ -0.41
NPHP1-205ENST00000418527 GPRC5DQ9NZD1 345 aa12.49□□□□□ -0.41
NPHP1-205ENST00000418527 DDX60LQ5H9U9 1706 aaKnown RBP12.48□□□□□ -0.41
NPHP1-205ENST00000418527 COL2A1P02458 1487 aaPredicted RBP12.48□□□□□ -0.41
NPHP1-205ENST00000418527 ZC3H4Q9UPT8 1303 aaKnown RBP12.48□□□□□ -0.41
NPHP1-205ENST00000418527 CCDC196A0A1B0GTZ2 297 aa12.48□□□□□ -0.41
NPHP1-205ENST00000418527 GOLGA8AA7E2F4 631 aa12.48□□□□□ -0.41
NPHP1-205ENST00000418527 CALM1P0DP23 149 aa12.48□□□□□ -0.41
NPHP1-205ENST00000418527 CALM2P0DP24 149 aa12.48□□□□□ -0.41
NPHP1-205ENST00000418527 CALM3P0DP25 149 aa12.48□□□□□ -0.41
NPHP1-205ENST00000418527 RASA1P20936 1047 aa12.48□□□□□ -0.41
NPHP1-205ENST00000418527 EVCP57679 992 aa12.48□□□□□ -0.41
NPHP1-205ENST00000418527 CCT2P78371 535 aaKnown RBP12.48□□□□□ -0.41
NPHP1-205ENST00000418527 NUCB2P80303 420 aa12.48□□□□□ -0.41
NPHP1-205ENST00000418527 CAMK2BQ13554 666 aa12.48□□□□□ -0.41
NPHP1-205ENST00000418527 NBPF9Q3BBW0 867 aa12.48□□□□□ -0.41
NPHP1-205ENST00000418527 SAMD7Q7Z3H4 446 aa12.48□□□□□ -0.41
NPHP1-205ENST00000418527 SGMS1Q86VZ5 419 aa12.48□□□□□ -0.41
NPHP1-205ENST00000418527 FAM184AQ8NB25 1140 aa12.48□□□□□ -0.41
NPHP1-205ENST00000418527 SLC44A5Q8NCS7 719 aa12.48□□□□□ -0.41
NPHP1-205ENST00000418527 ZBED3Q96IU2 234 aaPredicted RBP12.48□□□□□ -0.41
NPHP1-205ENST00000418527 CCDC17Q96LX7 622 aa12.48□□□□□ -0.41
NPHP1-205ENST00000418527 CSRNP1Q96S65 589 aa12.48□□□□□ -0.41
NPHP1-205ENST00000418527 LLPHQ9BRT6 129 aaKnown RBP12.48□□□□□ -0.41
NPHP1-205ENST00000418527 KAT14Q9H8E8 782 aa12.48□□□□□ -0.41
NPHP1-205ENST00000418527 MYH8P13535 1937 aa12.48□□□□□ -0.41
NPHP1-205ENST00000418527 SHTN1A0MZ66 631 aa12.47□□□□□ -0.41
NPHP1-205ENST00000418527 DDTLA6NHG4 134 aaPredicted RBP12.47□□□□□ -0.41
NPHP1-205ENST00000418527 MPHOSPH10O00566 681 aaKnown RBP12.47□□□□□ -0.41
NPHP1-205ENST00000418527 CDKL5O76039 1030 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms