RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 DCAF15Q66K64 600 aa12.44□□□□□ -0.42
PTCH1-205ENST00000418258 KRT25Q7Z3Z0 450 aa12.44□□□□□ -0.42
PTCH1-205ENST00000418258 FRMPD2Q68DX3 1309 aaPredicted RBP12.44□□□□□ -0.42
PTCH1-205ENST00000418258 TRIM14Q14142 442 aa12.44□□□□□ -0.42
PTCH1-205ENST00000418258 ANO1Q5XXA6 986 aa12.44□□□□□ -0.42
PTCH1-205ENST00000418258 DNAJC5BQ9UF47 199 aa12.44□□□□□ -0.42
PTCH1-205ENST00000418258 HPDP32754 393 aaPredicted RBP12.44□□□□□ -0.42
PTCH1-205ENST00000418258 SLC12A2P55011 1212 aa12.44□□□□□ -0.42
PTCH1-205ENST00000418258 SYT10Q6XYQ8 523 aa12.44□□□□□ -0.42
PTCH1-205ENST00000418258 REXO1Q8N1G1 1221 aaKnown RBP12.44□□□□□ -0.42
PTCH1-205ENST00000418258 MYO1AQ9UBC5 1043 aa12.44□□□□□ -0.42
PTCH1-205ENST00000418258 CSPG5O95196 566 aa12.44□□□□□ -0.42
PTCH1-205ENST00000418258 SLC9C1Q4G0N8 1177 aa12.44□□□□□ -0.42
PTCH1-205ENST00000418258 BSPRYQ5W0U4 402 aa12.44□□□□□ -0.42
PTCH1-205ENST00000418258 ANKRD35Q8N283 1001 aa12.44□□□□□ -0.42
PTCH1-205ENST00000418258 LRWD1Q9UFC0 647 aa12.44□□□□□ -0.42
PTCH1-205ENST00000418258 ATP10BO94823 1461 aa12.44□□□□□ -0.42
PTCH1-205ENST00000418258 hCG_1642624A0A1W2PR95 340 aa12.44□□□□□ -0.42
PTCH1-205ENST00000418258 FAM47AQ5JRC9 791 aa12.44□□□□□ -0.42
PTCH1-205ENST00000418258 SND1Q7KZF4 910 aaKnown RBP eCLIP12.44□□□□□ -0.42
PTCH1-205ENST00000418258 C2CD5Q86YS7 1000 aa12.44□□□□□ -0.42
PTCH1-205ENST00000418258 ASIC3Q9UHC3 531 aa12.44□□□□□ -0.42
PTCH1-205ENST00000418258 NONOQ15233 471 aaKnown RBP eCLIP12.43□□□□□ -0.42
PTCH1-205ENST00000418258 MYL10Q9BUA6 226 aa12.43□□□□□ -0.42
PTCH1-205ENST00000418258 MAN1A1P33908 653 aa12.43□□□□□ -0.42
PTCH1-205ENST00000418258 KRT81Q14533 505 aa12.43□□□□□ -0.42
PTCH1-205ENST00000418258 DBNDD2Q9BQY9 259 aa12.43□□□□□ -0.42
PTCH1-205ENST00000418258 ABCC10Q5T3U5 1492 aa12.43□□□□□ -0.42
PTCH1-205ENST00000418258 FAM170AA1A519 330 aa12.43□□□□□ -0.42
PTCH1-205ENST00000418258 TFAP4Q01664 338 aa12.43□□□□□ -0.42
PTCH1-205ENST00000418258 DOK7Q18PE1 504 aa12.43□□□□□ -0.42
PTCH1-205ENST00000418258 CEP85LQ5SZL2 805 aa12.43□□□□□ -0.42
PTCH1-205ENST00000418258 YWHAEP62258 255 aaKnown RBP12.43□□□□□ -0.42
PTCH1-205ENST00000418258 ITKQ08881 620 aa12.43□□□□□ -0.42
PTCH1-205ENST00000418258 PSMD6Q15008 389 aa12.43□□□□□ -0.42
PTCH1-205ENST00000418258 SEPT14Q6ZU15 432 aa12.43□□□□□ -0.42
PTCH1-205ENST00000418258 ALAS1P13196 640 aa12.43□□□□□ -0.42
PTCH1-205ENST00000418258 CTTNBP2NLQ9P2B4 639 aa12.43□□□□□ -0.42
PTCH1-205ENST00000418258 MUM1L1Q5H9M0 696 aa12.43□□□□□ -0.42
PTCH1-205ENST00000418258 SESTD1Q86VW0 696 aa12.43□□□□□ -0.42
PTCH1-205ENST00000418258 CEP57Q86XR8 500 aa12.43□□□□□ -0.42
PTCH1-205ENST00000418258 ZNF526Q8TF50 670 aaPredicted RBP12.43□□□□□ -0.42
PTCH1-205ENST00000418258 PRAG1Q86YV5 1406 aa12.43□□□□□ -0.42
PTCH1-205ENST00000418258 TUBB4AP04350 444 aa12.42□□□□□ -0.42
PTCH1-205ENST00000418258 SCNN1DP51172 638 aa12.42□□□□□ -0.42
PTCH1-205ENST00000418258 CTSWP56202 376 aa12.42□□□□□ -0.42
PTCH1-205ENST00000418258 MIER3Q7Z3K6 550 aa12.42□□□□□ -0.42
PTCH1-205ENST00000418258 LLPHQ9BRT6 129 aaKnown RBP12.42□□□□□ -0.42
PTCH1-205ENST00000418258 NUP58Q9BVL2 599 aa12.42□□□□□ -0.42
PTCH1-205ENST00000418258 TRIM31Q9BZY9 425 aa12.42□□□□□ -0.42
PTCH1-205ENST00000418258 SLAIN2Q9P270 581 aa12.42□□□□□ -0.42
PTCH1-205ENST00000418258 GKAP1Q5VSY0 366 aaPredicted RBP12.42□□□□□ -0.42
PTCH1-205ENST00000418258 NELFCDQ8IXH7 590 aa12.42□□□□□ -0.42
PTCH1-205ENST00000418258 KCNG1Q9UIX4 513 aa12.42□□□□□ -0.42
PTCH1-205ENST00000418258 OTUD7BQ6GQQ9 843 aa12.42□□□□□ -0.42
PTCH1-205ENST00000418258 FLAD1Q8NFF5 587 aa12.42□□□□□ -0.42
PTCH1-205ENST00000418258 TBC1D8O95759 1140 aa12.42□□□□□ -0.42
PTCH1-205ENST00000418258 ARHGAP44Q17R89 818 aa12.42□□□□□ -0.42
PTCH1-205ENST00000418258 PKNOX2Q96KN3 472 aa12.42□□□□□ -0.42
PTCH1-205ENST00000418258 ADPGKQ9BRR6 497 aa12.42□□□□□ -0.42
PTCH1-205ENST00000418258 SBNO1A3KN83 1393 aa12.42□□□□□ -0.42
PTCH1-205ENST00000418258 EBAG9O00559 213 aa12.42□□□□□ -0.42
PTCH1-205ENST00000418258 LRMPQ12912 555 aa12.42□□□□□ -0.42
PTCH1-205ENST00000418258 TAOK1Q7L7X3 1001 aa12.42□□□□□ -0.42
PTCH1-205ENST00000418258 RSPH3Q86UC2 560 aa12.42□□□□□ -0.42
PTCH1-205ENST00000418258 FAM76AQ8TAV0 307 aa12.42□□□□□ -0.42
PTCH1-205ENST00000418258 SNX21Q969T3 373 aa12.42□□□□□ -0.42
PTCH1-205ENST00000418258 NDUFB9Q9Y6M9 179 aa12.42□□□□□ -0.42
PTCH1-205ENST00000418258 FAM160A1Q05DH4 1040 aa12.42□□□□□ -0.42
PTCH1-205ENST00000418258 GCKRQ14397 625 aa12.42□□□□□ -0.42
PTCH1-205ENST00000418258 C8orf74Q6P047 294 aa12.42□□□□□ -0.42
PTCH1-205ENST00000418258 KIAA0825Q8IV33 1275 aa12.42□□□□□ -0.42
PTCH1-205ENST00000418258 FAM227BQ96M60 508 aa12.42□□□□□ -0.42
PTCH1-205ENST00000418258 LGR6Q9HBX8 967 aa12.42□□□□□ -0.42
PTCH1-205ENST00000418258 PRKAG2Q9UGJ0 569 aa12.42□□□□□ -0.42
PTCH1-205ENST00000418258 SWAP70Q9UH65 585 aa12.42□□□□□ -0.42
PTCH1-205ENST00000418258 G2E3Q7L622 706 aa12.41□□□□□ -0.42
PTCH1-205ENST00000418258 ZBTB8OSQ8IWT0 167 aa12.41□□□□□ -0.42
PTCH1-205ENST00000418258 MICALL1Q8N3F8 863 aa12.41□□□□□ -0.42
PTCH1-205ENST00000418258 LIG4P49917 911 aa12.41□□□□□ -0.42
PTCH1-205ENST00000418258 KIF11P52732 1056 aa12.41□□□□□ -0.42
PTCH1-205ENST00000418258 ARHGEF6Q15052 776 aa12.41□□□□□ -0.42
PTCH1-205ENST00000418258 CERKLQ49MI3 558 aaPredicted RBP12.41□□□□□ -0.42
PTCH1-205ENST00000418258 ARFGAP2Q8N6H7 521 aa12.41□□□□□ -0.42
PTCH1-205ENST00000418258 ZNF277Q9NRM2 450 aaPredicted RBP12.41□□□□□ -0.42
PTCH1-205ENST00000418258 CABP7Q86V35 215 aa12.41□□□□□ -0.42
PTCH1-205ENST00000418258 RSAD2Q8WXG1 361 aa12.41□□□□□ -0.42
PTCH1-205ENST00000418258 IGBP1P78318 339 aa12.41□□□□□ -0.42
PTCH1-205ENST00000418258 NUP160Q12769 1436 aa12.41□□□□□ -0.42
PTCH1-205ENST00000418258 DPP9Q86TI2 863 aa12.41□□□□□ -0.42
PTCH1-205ENST00000418258 DNAJC10Q8IXB1 793 aa12.41□□□□□ -0.42
PTCH1-205ENST00000418258 ABI1Q8IZP0 508 aa12.41□□□□□ -0.42
PTCH1-205ENST00000418258 ATP2A3Q93084 1043 aa12.41□□□□□ -0.42
PTCH1-205ENST00000418258 VPS54Q9P1Q0 977 aa12.41□□□□□ -0.42
PTCH1-205ENST00000418258 KDM3AQ9Y4C1 1321 aa12.41□□□□□ -0.42
PTCH1-205ENST00000418258 TMOD1P28289 359 aa12.41□□□□□ -0.42
PTCH1-205ENST00000418258 SARNPP82979 210 aaKnown RBP12.41□□□□□ -0.42
PTCH1-205ENST00000418258 HDXQ7Z353 690 aa12.41□□□□□ -0.42
PTCH1-205ENST00000418258 NOP9Q86U38 636 aaKnown RBP12.41□□□□□ -0.42
PTCH1-205ENST00000418258 TRIM50Q86XT4 487 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms