RNA–Protein interactions for RNA: ENST00000417709.5

TTC38-202, Transcript of tetratricopeptide repeat domain 38, humanhuman

TSL 3

Gene TTC38, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC38-202ENST00000417709 HLA-DOAP06340 250 aa17.4■□□□□ 0.38
TTC38-202ENST00000417709 CCNA1P78396 465 aa17.4■□□□□ 0.38
TTC38-202ENST00000417709 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.4■□□□□ 0.38
TTC38-202ENST00000417709 GTF3C2Q8WUA4 911 aaPredicted RBP17.4■□□□□ 0.38
TTC38-202ENST00000417709 ARHGAP45Q92619 1136 aa17.4■□□□□ 0.38
TTC38-202ENST00000417709 GUCD1Q96NT3 240 aa17.4■□□□□ 0.38
TTC38-202ENST00000417709 DBNDD2Q9BQY9 259 aa17.4■□□□□ 0.38
TTC38-202ENST00000417709 CNMDO75829 334 aa17.39■□□□□ 0.37
TTC38-202ENST00000417709 OS9Q13438 667 aaPredicted RBP17.39■□□□□ 0.37
TTC38-202ENST00000417709 RAB3GAP1Q15042 981 aa17.39■□□□□ 0.37
TTC38-202ENST00000417709 ATF7IPQ6VMQ6 1270 aa17.39■□□□□ 0.37
TTC38-202ENST00000417709 FEZ1Q99689 392 aa17.39■□□□□ 0.37
TTC38-202ENST00000417709 PRKAG2Q9UGJ0 569 aa17.39■□□□□ 0.37
TTC38-202ENST00000417709 TNNQ9UQP3 1299 aa17.39■□□□□ 0.37
TTC38-202ENST00000417709 SLC15A5A6NIM6 579 aa17.38■□□□□ 0.37
TTC38-202ENST00000417709 CYP7A1P22680 504 aa17.38■□□□□ 0.37
TTC38-202ENST00000417709 PTPREP23469 700 aa17.38■□□□□ 0.37
TTC38-202ENST00000417709 CYP2C19P33261 490 aa17.38■□□□□ 0.37
TTC38-202ENST00000417709 ZAP70P43403 619 aa17.38■□□□□ 0.37
TTC38-202ENST00000417709 FAM109BQ6ICB4 259 aaPredicted RBP17.38■□□□□ 0.37
TTC38-202ENST00000417709 CATSPERGQ6ZRH7 1159 aa17.38■□□□□ 0.37
TTC38-202ENST00000417709 ACER1Q8TDN7 264 aa17.38■□□□□ 0.37
TTC38-202ENST00000417709 PIH1D3Q9NQM4 214 aaKnown RBP17.38■□□□□ 0.37
TTC38-202ENST00000417709 DDX20Q9UHI6 824 aaKnown RBP17.38■□□□□ 0.37
TTC38-202ENST00000417709 MYH1P12882 1939 aa17.37■□□□□ 0.37
TTC38-202ENST00000417709 MYCNP04198 464 aaPredicted RBP17.37■□□□□ 0.37
TTC38-202ENST00000417709 TNNI3KQ59H18 835 aa17.37■□□□□ 0.37
TTC38-202ENST00000417709 GJC2Q5T442 439 aaPredicted RBP17.37■□□□□ 0.37
TTC38-202ENST00000417709 MIGA1Q8NAN2 632 aa17.37■□□□□ 0.37
TTC38-202ENST00000417709 NPLOC4Q8TAT6 608 aa17.37■□□□□ 0.37
TTC38-202ENST00000417709 FRAT1Q92837 279 aaPredicted RBP17.37■□□□□ 0.37
TTC38-202ENST00000417709 CLUAP1Q96AJ1 413 aa17.37■□□□□ 0.37
TTC38-202ENST00000417709 BTBD7Q9P203 1132 aa17.37■□□□□ 0.37
TTC38-202ENST00000417709 ATP11BQ9Y2G3 1177 aa17.37■□□□□ 0.37
TTC38-202ENST00000417709 IVNS1ABPQ9Y6Y0 642 aa17.37■□□□□ 0.37
TTC38-202ENST00000417709 FPGT-TNNI3KV9GXZ4 949 aa17.37■□□□□ 0.37
TTC38-202ENST00000417709 SPTBN5Q9NRC6 3674 aaKnown RBP17.36■□□□□ 0.37
TTC38-202ENST00000417709 IPO8O15397 1037 aaKnown RBP17.36■□□□□ 0.37
TTC38-202ENST00000417709 USP5P45974 858 aa17.36■□□□□ 0.37
TTC38-202ENST00000417709 RTP1P59025 263 aa17.36■□□□□ 0.37
TTC38-202ENST00000417709 CERKLQ49MI3 558 aaPredicted RBP17.36■□□□□ 0.37
TTC38-202ENST00000417709 ANO1Q5XXA6 986 aa17.36■□□□□ 0.37
TTC38-202ENST00000417709 TATDN1Q6P1N9 297 aa17.36■□□□□ 0.37
TTC38-202ENST00000417709 TRPV1Q8NER1 839 aa17.36■□□□□ 0.37
TTC38-202ENST00000417709 LPAR1Q92633 364 aa17.36■□□□□ 0.37
TTC38-202ENST00000417709 IDH1O75874 414 aaKnown RBP17.35■□□□□ 0.37
TTC38-202ENST00000417709 USP14P54578 494 aa17.35■□□□□ 0.37
TTC38-202ENST00000417709 SHHQ15465 462 aa17.35■□□□□ 0.37
TTC38-202ENST00000417709 ABCB5Q2M3G0 1257 aa17.35■□□□□ 0.37
TTC38-202ENST00000417709 DPP9Q86TI2 863 aa17.35■□□□□ 0.37
TTC38-202ENST00000417709 GPR108Q9NPR9 543 aa17.35■□□□□ 0.37
TTC38-202ENST00000417709 SMCHD1A6NHR9 2005 aa17.35■□□□□ 0.37
TTC38-202ENST00000417709 MSCO60682 206 aa17.34■□□□□ 0.37
TTC38-202ENST00000417709 SURF6O75683 361 aaKnown RBP17.34■□□□□ 0.37
TTC38-202ENST00000417709 BCAR3O75815 825 aa17.34■□□□□ 0.37
TTC38-202ENST00000417709 MYO9BQ13459 2157 aa17.34■□□□□ 0.37
TTC38-202ENST00000417709 ZNF697Q5TEC3 545 aa17.34■□□□□ 0.37
TTC38-202ENST00000417709 FOCADQ5VW36 1801 aa17.34■□□□□ 0.37
TTC38-202ENST00000417709 ARRDC4Q8NCT1 418 aa17.34■□□□□ 0.37
TTC38-202ENST00000417709 C12orf42Q96LP6 360 aa17.34■□□□□ 0.37
TTC38-202ENST00000417709 CDX2Q99626 313 aaPredicted RBP17.34■□□□□ 0.37
TTC38-202ENST00000417709 KIAA1683Q9H0B3 1180 aa17.34■□□□□ 0.37
TTC38-202ENST00000417709 CCDC8Q9H0W5 538 aaPredicted RBP17.34■□□□□ 0.37
TTC38-202ENST00000417709 SEMA6BQ9H3T3 888 aa17.34■□□□□ 0.37
TTC38-202ENST00000417709 CABP5Q9NP86 173 aa17.34■□□□□ 0.37
TTC38-202ENST00000417709 SERPINB13Q9UIV8 391 aa17.34■□□□□ 0.37
TTC38-202ENST00000417709 DNM1LO00429 736 aa17.33■□□□□ 0.36
TTC38-202ENST00000417709 HOXC6P09630 235 aa17.33■□□□□ 0.36
TTC38-202ENST00000417709 TRIM27P14373 513 aa17.33■□□□□ 0.36
TTC38-202ENST00000417709 VCAM1P19320 739 aa17.33■□□□□ 0.36
TTC38-202ENST00000417709 SLC39A5Q6ZMH5 540 aa17.33■□□□□ 0.36
TTC38-202ENST00000417709 TTC6Q86TZ1 520 aa17.33■□□□□ 0.36
TTC38-202ENST00000417709 MAGEB6Q8N7X4 407 aa17.33■□□□□ 0.36
TTC38-202ENST00000417709 RPAP3Q9H6T3 665 aaPredicted RBP17.33■□□□□ 0.36
TTC38-202ENST00000417709 PRDM5Q9NQX1 630 aaPredicted RBP17.33■□□□□ 0.36
TTC38-202ENST00000417709 CDH23Q9H251 3354 aa17.33■□□□□ 0.36
TTC38-202ENST00000417709 FRMPD3Q5JV73 1810 aa17.33■□□□□ 0.36
TTC38-202ENST00000417709 ATP8B2P98198 1209 aa17.32■□□□□ 0.36
TTC38-202ENST00000417709 GRB14Q14449 540 aa17.32■□□□□ 0.36
TTC38-202ENST00000417709 PRAMEF19Q5SWL8 479 aa17.32■□□□□ 0.36
TTC38-202ENST00000417709 C9orf50Q5SZB4 431 aa17.32■□□□□ 0.36
TTC38-202ENST00000417709 BADQ92934 168 aa17.32■□□□□ 0.36
TTC38-202ENST00000417709 FERMT2Q96AC1 680 aa17.32■□□□□ 0.36
TTC38-202ENST00000417709 ZNF512BQ96KM6 892 aaPredicted RBP17.32■□□□□ 0.36
TTC38-202ENST00000417709 HOXC10Q9NYD6 342 aa17.32■□□□□ 0.36
TTC38-202ENST00000417709 SPDYE16A6NNV3 312 aaPredicted RBP17.31■□□□□ 0.36
TTC38-202ENST00000417709 ADCYAP1R1P41586 468 aa17.31■□□□□ 0.36
TTC38-202ENST00000417709 PLCD1P51178 756 aa17.31■□□□□ 0.36
TTC38-202ENST00000417709 POLA2Q14181 598 aa17.31■□□□□ 0.36
TTC38-202ENST00000417709 COG2Q14746 738 aa17.31■□□□□ 0.36
TTC38-202ENST00000417709 ZNFX1Q9P2E3 1918 aaKnown RBP17.31■□□□□ 0.36
TTC38-202ENST00000417709 KBTBD13C9JR72 458 aa17.3■□□□□ 0.36
TTC38-202ENST00000417709 MPHOSPH10O00566 681 aaKnown RBP17.3■□□□□ 0.36
TTC38-202ENST00000417709 POLR3DP05423 398 aaPredicted RBP17.3■□□□□ 0.36
TTC38-202ENST00000417709 ADORA2AP29274 412 aa17.3■□□□□ 0.36
TTC38-202ENST00000417709 SEPT2Q15019 361 aa17.3■□□□□ 0.36
TTC38-202ENST00000417709 LBX2Q6XYB7 198 aa17.3■□□□□ 0.36
TTC38-202ENST00000417709 MOV10L1Q9BXT6 1211 aaKnown RBP17.3■□□□□ 0.36
TTC38-202ENST00000417709 TLR7Q9NYK1 1049 aaKnown RBP17.3■□□□□ 0.36
TTC38-202ENST00000417709 DBNLQ9UJU6 430 aaKnown RBP17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms