RNA–Protein interactions for RNA: ENST00000417470.1

COMMD3-BMI1-201, Transcript of COMMD3-BMI1 readthrough, humanhuman

TSL 5

Gene COMMD3-BMI1, Length 745 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1-201ENST00000417470 IGKV6D-41A0A0C4DH26 115 aa20.79■□□□□ 0.92
COMMD3-BMI1-201ENST00000417470 HSPA1AP0DMV8 641 aaKnown RBP20.79■□□□□ 0.92
COMMD3-BMI1-201ENST00000417470 HSPA1BP0DMV9 641 aaKnown RBP20.79■□□□□ 0.92
COMMD3-BMI1-201ENST00000417470 AKNAD1Q5T1N1 836 aa20.79■□□□□ 0.92
COMMD3-BMI1-201ENST00000417470 NEDD1Q8NHV4 660 aa20.79■□□□□ 0.92
COMMD3-BMI1-201ENST00000417470 LSG1Q9H089 658 aaKnown RBP20.79■□□□□ 0.92
COMMD3-BMI1-201ENST00000417470 NBPF3Q9H094 633 aa20.79■□□□□ 0.92
COMMD3-BMI1-201ENST00000417470 KIAA1683Q9H0B3 1180 aa20.79■□□□□ 0.92
COMMD3-BMI1-201ENST00000417470 SLC45A1Q9Y2W3 748 aa20.79■□□□□ 0.92
COMMD3-BMI1-201ENST00000417470 TACC3Q9Y6A5 838 aa20.79■□□□□ 0.92
COMMD3-BMI1-201ENST00000417470 PLIN4Q96Q06 1357 aa20.79■□□□□ 0.92
COMMD3-BMI1-201ENST00000417470 BTBD19C9JJ37 291 aa20.78■□□□□ 0.92
COMMD3-BMI1-201ENST00000417470 PRDM1O75626 825 aa20.78■□□□□ 0.92
COMMD3-BMI1-201ENST00000417470 USP14P54578 494 aa20.78■□□□□ 0.92
COMMD3-BMI1-201ENST00000417470 GPAT2Q6NUI2 795 aa20.78■□□□□ 0.92
COMMD3-BMI1-201ENST00000417470 MFSD6Q6ZSS7 791 aa20.78■□□□□ 0.92
COMMD3-BMI1-201ENST00000417470 SIAH1Q8IUQ4 282 aa20.78■□□□□ 0.92
COMMD3-BMI1-201ENST00000417470 STK11IPQ8N1F8 1099 aa20.78■□□□□ 0.92
COMMD3-BMI1-201ENST00000417470 C12orf42Q96LP6 360 aa20.78■□□□□ 0.92
COMMD3-BMI1-201ENST00000417470 MYH8P13535 1937 aa20.77■□□□□ 0.92
COMMD3-BMI1-201ENST00000417470 HAND2P61296 217 aa20.77■□□□□ 0.92
COMMD3-BMI1-201ENST00000417470 NOM1Q5C9Z4 860 aaKnown RBP20.77■□□□□ 0.92
COMMD3-BMI1-201ENST00000417470 USP17L2Q6R6M4 530 aa20.77■□□□□ 0.92
COMMD3-BMI1-201ENST00000417470 FAM43AQ8N2R8 423 aa20.77■□□□□ 0.92
COMMD3-BMI1-201ENST00000417470 NYAP2Q9P242 653 aa20.77■□□□□ 0.92
COMMD3-BMI1-201ENST00000417470 TRPA1O75762 1119 aa20.76■□□□□ 0.91
COMMD3-BMI1-201ENST00000417470 TSPY3P0CV98 308 aa20.76■□□□□ 0.91
COMMD3-BMI1-201ENST00000417470 TSPY8P0CW00 308 aa20.76■□□□□ 0.91
COMMD3-BMI1-201ENST00000417470 TFAP4Q01664 338 aa20.76■□□□□ 0.91
COMMD3-BMI1-201ENST00000417470 ICA1Q05084 483 aa20.76■□□□□ 0.91
COMMD3-BMI1-201ENST00000417470 MTMR2Q13614 643 aa20.76■□□□□ 0.91
COMMD3-BMI1-201ENST00000417470 PPP4R3BQ5MIZ7 849 aa20.76■□□□□ 0.91
COMMD3-BMI1-201ENST00000417470 TBC1D10CQ8IV04 446 aa20.76■□□□□ 0.91
COMMD3-BMI1-201ENST00000417470 ACER1Q8TDN7 264 aa20.76■□□□□ 0.91
COMMD3-BMI1-201ENST00000417470 SH2D4AQ9H788 454 aa20.76■□□□□ 0.91
COMMD3-BMI1-201ENST00000417470 ARHGEF10LQ9HCE6 1279 aa20.76■□□□□ 0.91
COMMD3-BMI1-201ENST00000417470 INCENPQ9NQS7 918 aa20.76■□□□□ 0.91
COMMD3-BMI1-201ENST00000417470 SYNPO2Q9UMS6 1093 aa20.76■□□□□ 0.91
COMMD3-BMI1-201ENST00000417470 AGTPBP1Q9UPW5 1226 aa20.76■□□□□ 0.91
COMMD3-BMI1-201ENST00000417470 TMX2Q9Y320 296 aa20.76■□□□□ 0.91
COMMD3-BMI1-201ENST00000417470 GREB1LQ9C091 1923 aaPredicted RBP20.76■□□□□ 0.91
COMMD3-BMI1-201ENST00000417470 PTPRFP10586 1907 aa20.75■□□□□ 0.91
COMMD3-BMI1-201ENST00000417470 A0A1W2PRG0 241 aa20.75■□□□□ 0.91
COMMD3-BMI1-201ENST00000417470 NOVP48745 357 aa20.75■□□□□ 0.91
COMMD3-BMI1-201ENST00000417470 HMGCS2P54868 508 aa20.75■□□□□ 0.91
COMMD3-BMI1-201ENST00000417470 MKL1Q969V6 931 aa20.75■□□□□ 0.91
COMMD3-BMI1-201ENST00000417470 EMILIN3Q9NT22 766 aa20.75■□□□□ 0.91
COMMD3-BMI1-201ENST00000417470 TCP11L1Q9NUJ3 509 aa20.75■□□□□ 0.91
COMMD3-BMI1-201ENST00000417470 MTMR4Q9NYA4 1195 aa20.75■□□□□ 0.91
COMMD3-BMI1-201ENST00000417470 TMOD4Q9NZQ9 345 aa20.75■□□□□ 0.91
COMMD3-BMI1-201ENST00000417470 TSPY2A6NKD2 308 aa20.74■□□□□ 0.91
COMMD3-BMI1-201ENST00000417470 PDHXO00330 501 aa20.74■□□□□ 0.91
COMMD3-BMI1-201ENST00000417470 FOXN1O15353 648 aa20.74■□□□□ 0.91
COMMD3-BMI1-201ENST00000417470 EPB41L2O43491 1005 aaKnown RBP20.74■□□□□ 0.91
COMMD3-BMI1-201ENST00000417470 CYP21A2P08686 494 aa20.74■□□□□ 0.91
COMMD3-BMI1-201ENST00000417470 HOXA7P31268 230 aaPredicted RBP20.74■□□□□ 0.91
COMMD3-BMI1-201ENST00000417470 CTCFP49711 727 aaPredicted RBP20.74■□□□□ 0.91
COMMD3-BMI1-201ENST00000417470 NECTIN1Q15223 517 aa20.74■□□□□ 0.91
COMMD3-BMI1-201ENST00000417470 GADL1Q6ZQY3 521 aa20.74■□□□□ 0.91
COMMD3-BMI1-201ENST00000417470 CNNM2Q9H8M5 875 aa20.74■□□□□ 0.91
COMMD3-BMI1-201ENST00000417470 ANO2Q9NQ90 1003 aa20.74■□□□□ 0.91
COMMD3-BMI1-201ENST00000417470 RBM8AQ9Y5S9 174 aaKnown RBP20.74■□□□□ 0.91
COMMD3-BMI1-201ENST00000417470 RANBP6O60518 1105 aaKnown RBP20.73■□□□□ 0.91
COMMD3-BMI1-201ENST00000417470 EEF2P13639 858 aaKnown RBP20.73■□□□□ 0.91
COMMD3-BMI1-201ENST00000417470 PABPC4Q13310 644 aaKnown RBP eCLIP20.73■□□□□ 0.912e-13■□□□□ 8.7
COMMD3-BMI1-201ENST00000417470 FAM47AQ5JRC9 791 aa20.73■□□□□ 0.91
COMMD3-BMI1-201ENST00000417470 ESR2Q92731 530 aa20.73■□□□□ 0.91
COMMD3-BMI1-201ENST00000417470 FEZ1Q99689 392 aa20.73■□□□□ 0.91
COMMD3-BMI1-201ENST00000417470 KRT23Q9C075 422 aa20.73■□□□□ 0.91
COMMD3-BMI1-201ENST00000417470 ZFYVE28Q9HCC9 887 aa20.73■□□□□ 0.91
COMMD3-BMI1-201ENST00000417470 LAMA4Q16363 1823 aa20.73■□□□□ 0.91
COMMD3-BMI1-201ENST00000417470 TTLL1O95922 423 aa20.72■□□□□ 0.91
COMMD3-BMI1-201ENST00000417470 HSPA8P11142 646 aaKnown RBP20.72■□□□□ 0.91
COMMD3-BMI1-201ENST00000417470 TAF1CQ15572 869 aaPredicted RBP20.72■□□□□ 0.91
COMMD3-BMI1-201ENST00000417470 LPAR1Q92633 364 aa20.72■□□□□ 0.91
COMMD3-BMI1-201ENST00000417470 CEP95Q96GE4 821 aa20.72■□□□□ 0.91
COMMD3-BMI1-201ENST00000417470 IL17RBQ9NRM6 502 aa20.72■□□□□ 0.91
COMMD3-BMI1-201ENST00000417470 LOC285556D6RIA3 1793 aa20.72■□□□□ 0.91
COMMD3-BMI1-201ENST00000417470 CRHR2Q13324 411 aa20.71■□□□□ 0.91
COMMD3-BMI1-201ENST00000417470 TREML2Q5T2D2 321 aa20.71■□□□□ 0.91
COMMD3-BMI1-201ENST00000417470 PARK7Q99497 189 aaKnown RBP20.71■□□□□ 0.91
COMMD3-BMI1-201ENST00000417470 VCPKMTQ9H867 229 aa20.71■□□□□ 0.91
COMMD3-BMI1-201ENST00000417470 TOMM22Q9NS69 142 aa20.71■□□□□ 0.91
COMMD3-BMI1-201ENST00000417470 PNMA3Q9UL41 463 aa20.71■□□□□ 0.91
COMMD3-BMI1-201ENST00000417470 NEDD4P46934 1319 aa20.71■□□□□ 0.91
COMMD3-BMI1-201ENST00000417470 TLR2O60603 784 aa20.7■□□□□ 0.9
COMMD3-BMI1-201ENST00000417470 REC8O95072 547 aa20.7■□□□□ 0.9
COMMD3-BMI1-201ENST00000417470 TBC1D8O95759 1140 aa20.7■□□□□ 0.9
COMMD3-BMI1-201ENST00000417470 CCDC178Q5BJE1 867 aa20.7■□□□□ 0.9
COMMD3-BMI1-201ENST00000417470 RRP12Q5JTH9 1297 aaKnown RBP20.7■□□□□ 0.9
COMMD3-BMI1-201ENST00000417470 CLEC10AQ8IUN9 316 aa20.7■□□□□ 0.9
COMMD3-BMI1-201ENST00000417470 TTC14Q96N46 770 aa20.7■□□□□ 0.9
COMMD3-BMI1-201ENST00000417470 GTF3C3Q9Y5Q9 886 aa20.7■□□□□ 0.9
COMMD3-BMI1-201ENST00000417470 OSBPP22059 807 aa20.69■□□□□ 0.9
COMMD3-BMI1-201ENST00000417470 DGKZQ13574 1117 aa20.69■□□□□ 0.9
COMMD3-BMI1-201ENST00000417470 TSGA10IPQ3SY00 556 aa20.69■□□□□ 0.9
COMMD3-BMI1-201ENST00000417470 R3HDMLQ9H3Y0 253 aa20.69■□□□□ 0.9
COMMD3-BMI1-201ENST00000417470 GOPCQ9HD26 462 aa20.69■□□□□ 0.9
COMMD3-BMI1-201ENST00000417470 PRDM10Q9NQV6 1147 aa20.69■□□□□ 0.9
COMMD3-BMI1-201ENST00000417470 CLIP2Q9UDT6 1046 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms