RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 CCAR1Q8IX12 1150 aaKnown RBP30.55■■■□□ 2.48
VEGFA-208ENST00000417285 ECHDC1Q9NTX5 307 aa30.55■■■□□ 2.48
VEGFA-208ENST00000417285 SWAP70Q9UH65 585 aa30.55■■■□□ 2.48
VEGFA-208ENST00000417285 SMARCA5O60264 1052 aaPredicted RBP30.54■■■□□ 2.48
VEGFA-208ENST00000417285 MBD4O95243 580 aa30.54■■■□□ 2.48
VEGFA-208ENST00000417285 TXNRD2Q9NNW7 524 aa30.54■■■□□ 2.48
VEGFA-208ENST00000417285 RRP1P56182 461 aaKnown RBP30.53■■■□□ 2.48
VEGFA-208ENST00000417285 CATSPERGQ6ZRH7 1159 aa30.53■■■□□ 2.48
VEGFA-208ENST00000417285 AMOTL1Q8IY63 956 aa30.53■■■□□ 2.48
VEGFA-208ENST00000417285 ACER1Q8TDN7 264 aa30.53■■■□□ 2.48
VEGFA-208ENST00000417285 DDRGK1Q96HY6 314 aa30.53■■■□□ 2.48
VEGFA-208ENST00000417285 GPATCH3Q96I76 525 aa30.53■■■□□ 2.48
VEGFA-208ENST00000417285 RABGAP1Q9Y3P9 1069 aa30.53■■■□□ 2.48
VEGFA-208ENST00000417285 CEP290O15078 2479 aa30.52■■■□□ 2.48
VEGFA-208ENST00000417285 HMGCRP04035 888 aa30.52■■■□□ 2.48
VEGFA-208ENST00000417285 GUCY1A2P33402 732 aa30.52■■■□□ 2.48
VEGFA-208ENST00000417285 ERVK-9P63128 1117 aa30.52■■■□□ 2.48
VEGFA-208ENST00000417285 ERVK-24P63145 666 aa30.52■■■□□ 2.48
VEGFA-208ENST00000417285 ZYXQ15942 572 aaKnown RBP30.52■■■□□ 2.48
VEGFA-208ENST00000417285 UBE2Q1Q7Z7E8 422 aa30.52■■■□□ 2.48
VEGFA-208ENST00000417285 NUDT12Q9BQG2 462 aa30.52■■■□□ 2.48
VEGFA-208ENST00000417285 PAK6Q9NQU5 681 aaPredicted RBP30.52■■■□□ 2.48
VEGFA-208ENST00000417285 MPHOSPH10O00566 681 aaKnown RBP30.51■■■□□ 2.47
VEGFA-208ENST00000417285 TFRCP02786 760 aaKnown RBP30.51■■■□□ 2.47
VEGFA-208ENST00000417285 SEPT2Q15019 361 aa30.51■■■□□ 2.47
VEGFA-208ENST00000417285 Q3C1V9 767 aa30.51■■■□□ 2.47
VEGFA-208ENST00000417285 SOCS4Q8WXH5 440 aa30.51■■■□□ 2.47
VEGFA-208ENST00000417285 PRKAB2O43741 272 aa30.5■■■□□ 2.47
VEGFA-208ENST00000417285 XRCC5P13010 732 aaKnown RBP30.5■■■□□ 2.47
VEGFA-208ENST00000417285 CCNA1P78396 465 aa30.5■■■□□ 2.47
VEGFA-208ENST00000417285 TRMT44Q8IYL2 757 aaKnown RBP30.5■■■□□ 2.47
VEGFA-208ENST00000417285 DEFB118Q96PH6 123 aa30.5■■■□□ 2.47
VEGFA-208ENST00000417285 HTATIP2Q9BUP3 242 aa30.5■■■□□ 2.47
VEGFA-208ENST00000417285 DOCK3Q8IZD9 2030 aa30.49■■■□□ 2.47
VEGFA-208ENST00000417285 VCAM1P19320 739 aa30.49■■■□□ 2.47
VEGFA-208ENST00000417285 TMEM179Q6ZVK1 233 aa30.49■■■□□ 2.47
VEGFA-208ENST00000417285 DPF3Q92784 378 aa30.49■■■□□ 2.47
VEGFA-208ENST00000417285 YTHDC1Q96MU7 727 aaKnown RBP30.49■■■□□ 2.47
VEGFA-208ENST00000417285 PAGR1Q9BTK6 254 aa30.49■■■□□ 2.47
VEGFA-208ENST00000417285 CYP2D6P10635 497 aa30.48■■■□□ 2.47
VEGFA-208ENST00000417285 SLFNL1Q499Z3 407 aa30.48■■■□□ 2.47
VEGFA-208ENST00000417285 C12orf60Q5U649 245 aa30.48■■■□□ 2.47
VEGFA-208ENST00000417285 LBX2Q6XYB7 198 aa30.48■■■□□ 2.47
VEGFA-208ENST00000417285 CCDC17Q96LX7 622 aa30.48■■■□□ 2.47
VEGFA-208ENST00000417285 PEX10O60683 326 aa30.47■■■□□ 2.47
VEGFA-208ENST00000417285 GLRX3O76003 335 aaKnown RBP30.47■■■□□ 2.47
VEGFA-208ENST00000417285 FARP2O94887 1054 aaPredicted RBP30.47■■■□□ 2.47
VEGFA-208ENST00000417285 PLEKHH3Q7Z736 793 aa30.47■■■□□ 2.47
VEGFA-208ENST00000417285 CRISPLD2Q9H0B8 497 aa30.47■■■□□ 2.47
VEGFA-208ENST00000417285 HMX1Q9NP08 348 aaPredicted RBP30.47■■■□□ 2.47
VEGFA-208ENST00000417285 SLC4A4Q9Y6R1 1079 aa30.47■■■□□ 2.47
VEGFA-208ENST00000417285 RPTORQ8N122 1335 aa30.47■■■□□ 2.47
VEGFA-208ENST00000417285 USP17L12C9JPN9 530 aa30.46■■■□□ 2.47
VEGFA-208ENST00000417285 USP17L21D6R901 530 aa30.46■■■□□ 2.47
VEGFA-208ENST00000417285 CYP2B6P20813 491 aa30.46■■■□□ 2.47
VEGFA-208ENST00000417285 POTEEQ6S8J3 1075 aa30.46■■■□□ 2.47
VEGFA-208ENST00000417285 DYNLL2Q96FJ2 89 aa30.46■■■□□ 2.47
VEGFA-208ENST00000417285 XRN2Q9H0D6 950 aaKnown RBP eCLIP30.46■■■□□ 2.473e-7■■■■□ 25.4
VEGFA-208ENST00000417285 HOXC10Q9NYD6 342 aa30.46■■■□□ 2.47
VEGFA-208ENST00000417285 EVX2Q03828 476 aa30.45■■■□□ 2.47
VEGFA-208ENST00000417285 GPR142Q7Z601 462 aa30.45■■■□□ 2.47
VEGFA-208ENST00000417285 PUS7LQ9H0K6 701 aaKnown RBP30.45■■■□□ 2.47
VEGFA-208ENST00000417285 PORCNQ9H237 461 aa30.45■■■□□ 2.47
VEGFA-208ENST00000417285 RPAP3Q9H6T3 665 aaPredicted RBP30.45■■■□□ 2.47
VEGFA-208ENST00000417285 CWC22Q9HCG8 908 aaKnown RBP30.45■■■□□ 2.47
VEGFA-208ENST00000417285 PCDHB15Q9Y5E8 787 aa30.45■■■□□ 2.47
VEGFA-208ENST00000417285 HABP4Q5JVS0 413 aaKnown RBP30.44■■■□□ 2.46
VEGFA-208ENST00000417285 KBTBD3Q8NAB2 608 aa30.44■■■□□ 2.46
VEGFA-208ENST00000417285 SLC44A5Q8NCS7 719 aa30.44■■■□□ 2.46
VEGFA-208ENST00000417285 USP6NLQ92738 828 aa30.44■■■□□ 2.46
VEGFA-208ENST00000417285 SH2D4AQ9H788 454 aa30.44■■■□□ 2.46
VEGFA-208ENST00000417285 DDX60LQ5H9U9 1706 aaKnown RBP30.44■■■□□ 2.46
VEGFA-208ENST00000417285 NAV1Q8NEY1 1877 aa30.44■■■□□ 2.46
VEGFA-208ENST00000417285 A0A1W2PRG0 241 aa30.43■■■□□ 2.46
VEGFA-208ENST00000417285 H0YGN5 161 aa30.43■■■□□ 2.46
VEGFA-208ENST00000417285 RGS2P41220 211 aa30.43■■■□□ 2.46
VEGFA-208ENST00000417285 CDK8P49336 464 aa30.43■■■□□ 2.46
VEGFA-208ENST00000417285 COG2Q14746 738 aa30.43■■■□□ 2.46
VEGFA-208ENST00000417285 MORN1Q5T089 497 aa30.43■■■□□ 2.46
VEGFA-208ENST00000417285 CNMDO75829 334 aa30.42■■■□□ 2.46
VEGFA-208ENST00000417285 CHGBP05060 677 aa30.42■■■□□ 2.46
VEGFA-208ENST00000417285 C16orf86Q6ZW13 317 aa30.42■■■□□ 2.46
VEGFA-208ENST00000417285 TRIB2Q92519 343 aa30.42■■■□□ 2.46
VEGFA-208ENST00000417285 LPAR1Q92633 364 aa30.42■■■□□ 2.46
VEGFA-208ENST00000417285 STRBPQ96SI9 672 aaKnown RBP30.42■■■□□ 2.46
VEGFA-208ENST00000417285 ARHGEF10LQ9HCE6 1279 aa30.42■■■□□ 2.46
VEGFA-208ENST00000417285 NR2E3Q9Y5X4 410 aa30.42■■■□□ 2.46
VEGFA-208ENST00000417285 ZFYP08048 801 aaPredicted RBP30.41■■■□□ 2.46
VEGFA-208ENST00000417285 LRRFIP1Q32MZ4 808 aaKnown RBP30.41■■■□□ 2.46
VEGFA-208ENST00000417285 CTR9Q6PD62 1173 aa30.41■■■□□ 2.46
VEGFA-208ENST00000417285 ANKLE1Q8NAG6 615 aa30.41■■■□□ 2.46
VEGFA-208ENST00000417285 SPDYE16A6NNV3 312 aaPredicted RBP30.4■■■□□ 2.46
VEGFA-208ENST00000417285 AKR1B1P15121 316 aa30.4■■■□□ 2.46
VEGFA-208ENST00000417285 MAP3K21Q5TCX8 1036 aa30.4■■■□□ 2.46
VEGFA-208ENST00000417285 GIMAP6Q6P9H5 292 aa30.4■■■□□ 2.46
VEGFA-208ENST00000417285 TMX2Q9Y320 296 aa30.4■■■□□ 2.46
VEGFA-208ENST00000417285 RNF113AO15541 343 aaKnown RBP30.39■■■□□ 2.46
VEGFA-208ENST00000417285 ZKSCAN1P17029 563 aaPredicted RBP30.39■■■□□ 2.46
VEGFA-208ENST00000417285 TRIM32Q13049 653 aa30.39■■■□□ 2.46
VEGFA-208ENST00000417285 SIAH1Q8IUQ4 282 aa30.39■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms