RNA–Protein interactions for RNA: ENST00000416778.5

CPNE1-210, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-210ENST00000416778 USP17L21D6R901 530 aa21.54■■□□□ 1.04
CPNE1-210ENST00000416778 USP17L18D6R9N7 530 aa21.54■■□□□ 1.04
CPNE1-210ENST00000416778 USP17L22D6RA61 530 aa21.54■■□□□ 1.04
CPNE1-210ENST00000416778 USP17L17D6RBQ6 530 aa21.54■■□□□ 1.04
CPNE1-210ENST00000416778 USP17L19D6RCP7 530 aa21.54■■□□□ 1.04
CPNE1-210ENST00000416778 USP17L20D6RJB6 530 aa21.54■■□□□ 1.04
CPNE1-210ENST00000416778 GJA8P48165 433 aa21.54■■□□□ 1.04
CPNE1-210ENST00000416778 USP14P54578 494 aa21.54■■□□□ 1.04
CPNE1-210ENST00000416778 USP17L24Q0WX57 530 aa21.54■■□□□ 1.04
CPNE1-210ENST00000416778 ZYXQ15942 572 aaKnown RBP21.54■■□□□ 1.04
CPNE1-210ENST00000416778 TSHZ3Q63HK5 1081 aa21.54■■□□□ 1.04
CPNE1-210ENST00000416778 CATSPERGQ6ZRH7 1159 aa21.54■■□□□ 1.04
CPNE1-210ENST00000416778 SIAH1Q8IUQ4 282 aa21.54■■□□□ 1.04
CPNE1-210ENST00000416778 SLC44A5Q8NCS7 719 aa21.54■■□□□ 1.04
CPNE1-210ENST00000416778 SWAP70Q9UH65 585 aa21.54■■□□□ 1.04
CPNE1-210ENST00000416778 A0A1W2PRG0 241 aa21.53■■□□□ 1.04
CPNE1-210ENST00000416778 KBTBD3Q8NAB2 608 aa21.53■■□□□ 1.04
CPNE1-210ENST00000416778 NKX2-3Q8TAU0 364 aa21.53■■□□□ 1.04
CPNE1-210ENST00000416778 STRBPQ96SI9 672 aaKnown RBP21.53■■□□□ 1.04
CPNE1-210ENST00000416778 UNC93B1Q9H1C4 597 aa21.53■■□□□ 1.04
CPNE1-210ENST00000416778 SLC4A4Q9Y6R1 1079 aa21.53■■□□□ 1.04
CPNE1-210ENST00000416778 DOCK3Q8IZD9 2030 aa21.52■■□□□ 1.04
CPNE1-210ENST00000416778 CYP2D7A0A087X1C5 515 aa21.52■■□□□ 1.04
CPNE1-210ENST00000416778 CTR9Q6PD62 1173 aa21.52■■□□□ 1.04
CPNE1-210ENST00000416778 SHISA4Q96DD7 197 aa21.52■■□□□ 1.04
CPNE1-210ENST00000416778 CRBNQ96SW2 442 aa21.52■■□□□ 1.04
CPNE1-210ENST00000416778 FEZ1Q99689 392 aa21.52■■□□□ 1.04
CPNE1-210ENST00000416778 MGAMO43451 1857 aa21.52■■□□□ 1.03
CPNE1-210ENST00000416778 RBBP6Q7Z6E9 1792 aaKnown RBP21.51■■□□□ 1.03
CPNE1-210ENST00000416778 MPHOSPH10O00566 681 aaKnown RBP21.51■■□□□ 1.03
CPNE1-210ENST00000416778 RNF113AO15541 343 aaKnown RBP21.51■■□□□ 1.03
CPNE1-210ENST00000416778 INHAP05111 366 aa21.51■■□□□ 1.03
CPNE1-210ENST00000416778 CDK8P49336 464 aa21.51■■□□□ 1.03
CPNE1-210ENST00000416778 GTF3C2Q8WUA4 911 aaPredicted RBP21.51■■□□□ 1.03
CPNE1-210ENST00000416778 OSBP2Q969R2 916 aa21.51■■□□□ 1.03
CPNE1-210ENST00000416778 GPATCH3Q96I76 525 aa21.51■■□□□ 1.03
CPNE1-210ENST00000416778 CNMDO75829 334 aa21.5■■□□□ 1.03
CPNE1-210ENST00000416778 SGPL1O95470 568 aa21.5■■□□□ 1.03
CPNE1-210ENST00000416778 VCAM1P19320 739 aa21.5■■□□□ 1.03
CPNE1-210ENST00000416778 ERVK-9P63128 1117 aa21.5■■□□□ 1.03
CPNE1-210ENST00000416778 ERVK-24P63145 666 aa21.5■■□□□ 1.03
CPNE1-210ENST00000416778 TMEM179Q6ZVK1 233 aa21.5■■□□□ 1.03
CPNE1-210ENST00000416778 OTUD7AQ8TE49 926 aaPredicted RBP21.5■■□□□ 1.03
CPNE1-210ENST00000416778 RABGAP1Q9Y3P9 1069 aa21.5■■□□□ 1.03
CPNE1-210ENST00000416778 GSG1L2A8MUP6 293 aa21.49■■□□□ 1.03
CPNE1-210ENST00000416778 AKR1B1P15121 316 aa21.49■■□□□ 1.03
CPNE1-210ENST00000416778 LBX2Q6XYB7 198 aa21.49■■□□□ 1.03
CPNE1-210ENST00000416778 C16orf86Q6ZW13 317 aa21.49■■□□□ 1.03
CPNE1-210ENST00000416778 UBE2Q1Q7Z7E8 422 aa21.49■■□□□ 1.03
CPNE1-210ENST00000416778 U2AF1L4Q8WU68 220 aaKnown RBP21.49■■□□□ 1.03
CPNE1-210ENST00000416778 CCDC17Q96LX7 622 aa21.49■■□□□ 1.03
CPNE1-210ENST00000416778 PORCNQ9H237 461 aa21.49■■□□□ 1.03
CPNE1-210ENST00000416778 TTC41PQ6P2S7 1318 aa21.49■■□□□ 1.03
CPNE1-210ENST00000416778 MAPK4P31152 587 aa21.48■■□□□ 1.03
CPNE1-210ENST00000416778 KIAA1755Q5JYT7 1200 aa21.48■■□□□ 1.03
CPNE1-210ENST00000416778 PI4K2BQ8TCG2 481 aa21.48■■□□□ 1.03
CPNE1-210ENST00000416778 USP6NLQ92738 828 aa21.48■■□□□ 1.03
CPNE1-210ENST00000416778 DDRGK1Q96HY6 314 aa21.48■■□□□ 1.03
CPNE1-210ENST00000416778 YTHDC1Q96MU7 727 aaKnown RBP21.48■■□□□ 1.03
CPNE1-210ENST00000416778 PAGR1Q9BTK6 254 aa21.48■■□□□ 1.03
CPNE1-210ENST00000416778 RPAP3Q9H6T3 665 aaPredicted RBP21.48■■□□□ 1.03
CPNE1-210ENST00000416778 ZFYP08048 801 aaPredicted RBP21.47■■□□□ 1.03
CPNE1-210ENST00000416778 SBK1Q52WX2 424 aa21.47■■□□□ 1.03
CPNE1-210ENST00000416778 GIMAP6Q6P9H5 292 aa21.47■■□□□ 1.03
CPNE1-210ENST00000416778 AMOTL1Q8IY63 956 aa21.47■■□□□ 1.03
CPNE1-210ENST00000416778 APPBP2Q92624 585 aa21.47■■□□□ 1.03
CPNE1-210ENST00000416778 PAK6Q9NQU5 681 aaPredicted RBP21.47■■□□□ 1.03
CPNE1-210ENST00000416778 HOXC10Q9NYD6 342 aa21.47■■□□□ 1.03
CPNE1-210ENST00000416778 TMX2Q9Y320 296 aa21.47■■□□□ 1.03
CPNE1-210ENST00000416778 DDX60LQ5H9U9 1706 aaKnown RBP21.46■■□□□ 1.03
CPNE1-210ENST00000416778 XRCC5P13010 732 aaKnown RBP21.46■■□□□ 1.03
CPNE1-210ENST00000416778 CYP2B6P20813 491 aa21.46■■□□□ 1.03
CPNE1-210ENST00000416778 TRIM32Q13049 653 aa21.46■■□□□ 1.03
CPNE1-210ENST00000416778 COG2Q14746 738 aa21.46■■□□□ 1.03
CPNE1-210ENST00000416778 MORN1Q5T089 497 aa21.46■■□□□ 1.03
CPNE1-210ENST00000416778 NUDT12Q9BQG2 462 aa21.46■■□□□ 1.03
CPNE1-210ENST00000416778 BTBD7Q9P203 1132 aa21.46■■□□□ 1.03
CPNE1-210ENST00000416778 ERC2O15083 957 aa21.45■■□□□ 1.02
CPNE1-210ENST00000416778 GLRX3O76003 335 aaKnown RBP21.45■■□□□ 1.02
CPNE1-210ENST00000416778 CAPN2P17655 700 aa21.45■■□□□ 1.02
CPNE1-210ENST00000416778 ANKRD45Q5TZF3 282 aa21.45■■□□□ 1.02
CPNE1-210ENST00000416778 GPR142Q7Z601 462 aa21.45■■□□□ 1.02
CPNE1-210ENST00000416778 PLEKHH3Q7Z736 793 aa21.45■■□□□ 1.02
CPNE1-210ENST00000416778 DEFB118Q96PH6 123 aa21.45■■□□□ 1.02
CPNE1-210ENST00000416778 CRISPLD2Q9H0B8 497 aa21.45■■□□□ 1.02
CPNE1-210ENST00000416778 SPDYE16A6NNV3 312 aaPredicted RBP21.44■■□□□ 1.02
CPNE1-210ENST00000416778 TFRCP02786 760 aaKnown RBP21.44■■□□□ 1.02
CPNE1-210ENST00000416778 HMGCRP04035 888 aa21.44■■□□□ 1.02
CPNE1-210ENST00000416778 HDAC1Q13547 482 aaPredicted RBP21.44■■□□□ 1.02
CPNE1-210ENST00000416778 CLEC10AQ8IUN9 316 aa21.44■■□□□ 1.02
CPNE1-210ENST00000416778 CCAR1Q8IX12 1150 aaKnown RBP21.44■■□□□ 1.02
CPNE1-210ENST00000416778 TRIB2Q92519 343 aa21.44■■□□□ 1.02
CPNE1-210ENST00000416778 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.44■■□□□ 1.02
CPNE1-210ENST00000416778 SALL3Q9BXA9 1300 aa21.44■■□□□ 1.02
CPNE1-210ENST00000416778 PATL2C9JE40 543 aaKnown RBP21.43■■□□□ 1.02
CPNE1-210ENST00000416778 M0R2C6 588 aa21.43■■□□□ 1.02
CPNE1-210ENST00000416778 GPAA1O43292 621 aa21.43■■□□□ 1.02
CPNE1-210ENST00000416778 CCNA1P78396 465 aa21.43■■□□□ 1.02
CPNE1-210ENST00000416778 SOCS4Q8WXH5 440 aa21.43■■□□□ 1.02
CPNE1-210ENST00000416778 KANSL2Q9H9L4 492 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms