RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 DDX60LQ5H9U9 1706 aaKnown RBP21.21■□□□□ 0.99
PDLIM2-208ENST00000416159 GUCY1A2P33402 732 aa21.21■□□□□ 0.99
PDLIM2-208ENST00000416159 ZYXQ15942 572 aaKnown RBP21.21■□□□□ 0.99
PDLIM2-208ENST00000416159 U2AF1L4Q8WU68 220 aaKnown RBP21.21■□□□□ 0.99
PDLIM2-208ENST00000416159 TXNRD2Q9NNW7 524 aa21.21■□□□□ 0.99
PDLIM2-208ENST00000416159 SWAP70Q9UH65 585 aa21.21■□□□□ 0.99
PDLIM2-208ENST00000416159 PRKAB2O43741 272 aa21.2■□□□□ 0.98
PDLIM2-208ENST00000416159 SGPL1O95470 568 aa21.2■□□□□ 0.98
PDLIM2-208ENST00000416159 ERVK-9P63128 1117 aa21.2■□□□□ 0.98
PDLIM2-208ENST00000416159 ERVK-24P63145 666 aa21.2■□□□□ 0.98
PDLIM2-208ENST00000416159 SLFNL1Q499Z3 407 aa21.2■□□□□ 0.98
PDLIM2-208ENST00000416159 ACER1Q8TDN7 264 aa21.2■□□□□ 0.98
PDLIM2-208ENST00000416159 MPHOSPH10O00566 681 aaKnown RBP21.19■□□□□ 0.98
PDLIM2-208ENST00000416159 MAPK4P31152 587 aa21.19■□□□□ 0.98
PDLIM2-208ENST00000416159 SEPT2Q15019 361 aa21.19■□□□□ 0.98
PDLIM2-208ENST00000416159 Q3C1V9 767 aa21.19■□□□□ 0.98
PDLIM2-208ENST00000416159 CATSPERGQ6ZRH7 1159 aa21.19■□□□□ 0.98
PDLIM2-208ENST00000416159 CCAR1Q8IX12 1150 aaKnown RBP21.19■□□□□ 0.98
PDLIM2-208ENST00000416159 AMOTL1Q8IY63 956 aa21.19■□□□□ 0.98
PDLIM2-208ENST00000416159 DDRGK1Q96HY6 314 aa21.19■□□□□ 0.98
PDLIM2-208ENST00000416159 GPATCH3Q96I76 525 aa21.19■□□□□ 0.98
PDLIM2-208ENST00000416159 NUDT12Q9BQG2 462 aa21.19■□□□□ 0.98
PDLIM2-208ENST00000416159 RABGAP1Q9Y3P9 1069 aa21.19■□□□□ 0.98
PDLIM2-208ENST00000416159 MYH7P12883 1935 aa21.19■□□□□ 0.98
PDLIM2-208ENST00000416159 HMGCRP04035 888 aa21.18■□□□□ 0.98
PDLIM2-208ENST00000416159 CYP2D6P10635 497 aa21.18■□□□□ 0.98
PDLIM2-208ENST00000416159 EVX2Q03828 476 aa21.18■□□□□ 0.98
PDLIM2-208ENST00000416159 PAGR1Q9BTK6 254 aa21.18■□□□□ 0.98
PDLIM2-208ENST00000416159 PEX10O60683 326 aa21.17■□□□□ 0.98
PDLIM2-208ENST00000416159 VCAM1P19320 739 aa21.17■□□□□ 0.98
PDLIM2-208ENST00000416159 C12orf60Q5U649 245 aa21.17■□□□□ 0.98
PDLIM2-208ENST00000416159 TMEM179Q6ZVK1 233 aa21.17■□□□□ 0.98
PDLIM2-208ENST00000416159 SOCS4Q8WXH5 440 aa21.17■□□□□ 0.98
PDLIM2-208ENST00000416159 DYNLL2Q96FJ2 89 aa21.17■□□□□ 0.98
PDLIM2-208ENST00000416159 PAK6Q9NQU5 681 aaPredicted RBP21.17■□□□□ 0.98
PDLIM2-208ENST00000416159 SLC4A4Q9Y6R1 1079 aa21.17■□□□□ 0.98
PDLIM2-208ENST00000416159 TFRCP02786 760 aaKnown RBP21.16■□□□□ 0.98
PDLIM2-208ENST00000416159 CHGBP05060 677 aa21.16■□□□□ 0.98
PDLIM2-208ENST00000416159 CCNA1P78396 465 aa21.16■□□□□ 0.98
PDLIM2-208ENST00000416159 UBE2Q1Q7Z7E8 422 aa21.16■□□□□ 0.98
PDLIM2-208ENST00000416159 SLC44A5Q8NCS7 719 aa21.16■□□□□ 0.98
PDLIM2-208ENST00000416159 CCDC17Q96LX7 622 aa21.16■□□□□ 0.98
PDLIM2-208ENST00000416159 DEFB118Q96PH6 123 aa21.16■□□□□ 0.98
PDLIM2-208ENST00000416159 HTATIP2Q9BUP3 242 aa21.16■□□□□ 0.98
PDLIM2-208ENST00000416159 PUS7LQ9H0K6 701 aaKnown RBP21.16■□□□□ 0.98
PDLIM2-208ENST00000416159 BAZ2AQ9UIF9 1905 aaKnown RBP21.16■□□□□ 0.98
PDLIM2-208ENST00000416159 MKI67P46013 3256 aaKnown RBP21.15■□□□□ 0.98
PDLIM2-208ENST00000416159 USP17L12C9JPN9 530 aa21.15■□□□□ 0.98
PDLIM2-208ENST00000416159 USP17L21D6R901 530 aa21.15■□□□□ 0.98
PDLIM2-208ENST00000416159 FARP2O94887 1054 aaPredicted RBP21.15■□□□□ 0.98
PDLIM2-208ENST00000416159 XRCC5P13010 732 aaKnown RBP21.15■□□□□ 0.98
PDLIM2-208ENST00000416159 CYP2B6P20813 491 aa21.15■□□□□ 0.98
PDLIM2-208ENST00000416159 POTEEQ6S8J3 1075 aa21.15■□□□□ 0.98
PDLIM2-208ENST00000416159 LBX2Q6XYB7 198 aa21.15■□□□□ 0.98
PDLIM2-208ENST00000416159 GPR142Q7Z601 462 aa21.15■□□□□ 0.98
PDLIM2-208ENST00000416159 PLEKHH3Q7Z736 793 aa21.15■□□□□ 0.98
PDLIM2-208ENST00000416159 TRMT44Q8IYL2 757 aaKnown RBP21.15■□□□□ 0.98
PDLIM2-208ENST00000416159 KBTBD3Q8NAB2 608 aa21.15■□□□□ 0.98
PDLIM2-208ENST00000416159 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.15■□□□□ 0.98
PDLIM2-208ENST00000416159 PORCNQ9H237 461 aa21.15■□□□□ 0.98
PDLIM2-208ENST00000416159 RPAP3Q9H6T3 665 aaPredicted RBP21.15■□□□□ 0.98
PDLIM2-208ENST00000416159 BRCA2P51587 3418 aa21.15■□□□□ 0.98
PDLIM2-208ENST00000416159 RPTORQ8N122 1335 aa21.14■□□□□ 0.97
PDLIM2-208ENST00000416159 PLXNB2O15031 1838 aa21.14■□□□□ 0.97
PDLIM2-208ENST00000416159 A0A1W2PRG0 241 aa21.14■□□□□ 0.97
PDLIM2-208ENST00000416159 CDK8P49336 464 aa21.14■□□□□ 0.97
PDLIM2-208ENST00000416159 DPF3Q92784 378 aa21.14■□□□□ 0.97
PDLIM2-208ENST00000416159 CRISPLD2Q9H0B8 497 aa21.14■□□□□ 0.97
PDLIM2-208ENST00000416159 CWC22Q9HCG8 908 aaKnown RBP21.14■□□□□ 0.97
PDLIM2-208ENST00000416159 HMX1Q9NP08 348 aaPredicted RBP21.14■□□□□ 0.97
PDLIM2-208ENST00000416159 PCDHB15Q9Y5E8 787 aa21.14■□□□□ 0.97
PDLIM2-208ENST00000416159 MYH8P13535 1937 aa21.14■□□□□ 0.97
PDLIM2-208ENST00000416159 CNMDO75829 334 aa21.13■□□□□ 0.97
PDLIM2-208ENST00000416159 GLRX3O76003 335 aaKnown RBP21.13■□□□□ 0.97
PDLIM2-208ENST00000416159 RGS2P41220 211 aa21.13■□□□□ 0.97
PDLIM2-208ENST00000416159 RRP1P56182 461 aaKnown RBP21.13■□□□□ 0.97
PDLIM2-208ENST00000416159 C16orf86Q6ZW13 317 aa21.13■□□□□ 0.97
PDLIM2-208ENST00000416159 TRIB2Q92519 343 aa21.13■□□□□ 0.97
PDLIM2-208ENST00000416159 USP6NLQ92738 828 aa21.13■□□□□ 0.97
PDLIM2-208ENST00000416159 ARHGEF10LQ9HCE6 1279 aa21.13■□□□□ 0.97
PDLIM2-208ENST00000416159 HOXC10Q9NYD6 342 aa21.13■□□□□ 0.97
PDLIM2-208ENST00000416159 CYP2D7A0A087X1C5 515 aa21.12■□□□□ 0.97
PDLIM2-208ENST00000416159 SPDYE16A6NNV3 312 aaPredicted RBP21.12■□□□□ 0.97
PDLIM2-208ENST00000416159 AKR1B1P15121 316 aa21.12■□□□□ 0.97
PDLIM2-208ENST00000416159 MORN1Q5T089 497 aa21.12■□□□□ 0.97
PDLIM2-208ENST00000416159 CTR9Q6PD62 1173 aa21.12■□□□□ 0.97
PDLIM2-208ENST00000416159 STRBPQ96SI9 672 aaKnown RBP21.12■□□□□ 0.97
PDLIM2-208ENST00000416159 SH2D4AQ9H788 454 aa21.12■□□□□ 0.97
PDLIM2-208ENST00000416159 TTC41PQ6P2S7 1318 aa21.11■□□□□ 0.97
PDLIM2-208ENST00000416159 ERC2O15083 957 aa21.11■□□□□ 0.97
PDLIM2-208ENST00000416159 RNF113AO15541 343 aaKnown RBP21.11■□□□□ 0.97
PDLIM2-208ENST00000416159 ZFYP08048 801 aaPredicted RBP21.11■□□□□ 0.97
PDLIM2-208ENST00000416159 ICA1Q05084 483 aa21.11■□□□□ 0.97
PDLIM2-208ENST00000416159 TRIM32Q13049 653 aa21.11■□□□□ 0.97
PDLIM2-208ENST00000416159 COG2Q14746 738 aa21.11■□□□□ 0.97
PDLIM2-208ENST00000416159 LRRFIP1Q32MZ4 808 aaKnown RBP21.11■□□□□ 0.97
PDLIM2-208ENST00000416159 HABP4Q5JVS0 413 aaKnown RBP21.11■□□□□ 0.97
PDLIM2-208ENST00000416159 APPBP2Q92624 585 aa21.11■□□□□ 0.97
PDLIM2-208ENST00000416159 LPAR1Q92633 364 aa21.11■□□□□ 0.97
PDLIM2-208ENST00000416159 ARPP21Q9UBL0 812 aaPredicted RBP21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms