RNA–Protein interactions for RNA: ENST00000415541.5

SIK3-203, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 3,816 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-203ENST00000415541 THRAP3Q9Y2W1 955 aaKnown RBP8.81□□□□□ -1
SIK3-203ENST00000415541 KDM6AO15550 1401 aaPredicted RBP8.81□□□□□ -1
SIK3-203ENST00000415541 MEFVO15553 781 aaPredicted RBP8.81□□□□□ -1
SIK3-203ENST00000415541 CAND2O75155 1236 aa8.81□□□□□ -1
SIK3-203ENST00000415541 AARSP49588 968 aaKnown RBP eCLIP8.81□□□□□ -1
SIK3-203ENST00000415541 IRAK1P51617 712 aa8.81□□□□□ -1
SIK3-203ENST00000415541 SMTNP53814 917 aa8.81□□□□□ -1
SIK3-203ENST00000415541 CCDC40Q4G0X9 1142 aa8.81□□□□□ -1
SIK3-203ENST00000415541 FILIP1LQ4L180 1135 aa8.81□□□□□ -1
SIK3-203ENST00000415541 KBTBD3Q8NAB2 608 aa8.81□□□□□ -1
SIK3-203ENST00000415541 LRRC37A3O60309 1634 aa8.81□□□□□ -1
SIK3-203ENST00000415541 XRN1Q8IZH2 1706 aaKnown RBP8.81□□□□□ -1
SIK3-203ENST00000415541 SPATA31A1Q5TZJ5 1347 aa8.81□□□□□ -1
SIK3-203ENST00000415541 VWA3AA6NCI4 1184 aa8.81□□□□□ -1
SIK3-203ENST00000415541 FANCCQ00597 558 aa8.81□□□□□ -1
SIK3-203ENST00000415541 FAM160A1Q05DH4 1040 aa8.81□□□□□ -1
SIK3-203ENST00000415541 TTF1Q15361 905 aaPredicted RBP8.81□□□□□ -1
SIK3-203ENST00000415541 CCDC70Q6NSX1 233 aa8.81□□□□□ -1
SIK3-203ENST00000415541 MAGEB6Q8N7X4 407 aa8.81□□□□□ -1
SIK3-203ENST00000415541 PDILTQ8N807 584 aa8.81□□□□□ -1
SIK3-203ENST00000415541 CNBD1Q8NA66 436 aa8.81□□□□□ -1
SIK3-203ENST00000415541 CERKQ8TCT0 537 aa8.81□□□□□ -1
SIK3-203ENST00000415541 TATDN2Q93075 761 aa8.81□□□□□ -1
SIK3-203ENST00000415541 SALL3Q9BXA9 1300 aa8.8□□□□□ -1
SIK3-203ENST00000415541 APBA3O96018 575 aa8.8□□□□□ -1
SIK3-203ENST00000415541 CCNHP51946 323 aaPredicted RBP8.8□□□□□ -1
SIK3-203ENST00000415541 IFFO1Q0D2I5 559 aa8.8□□□□□ -1
SIK3-203ENST00000415541 ZC3H12AQ5D1E8 599 aaKnown RBP8.8□□□□□ -1
SIK3-203ENST00000415541 IGSF22Q8N9C0 903 aa8.8□□□□□ -1
SIK3-203ENST00000415541 KLHL23Q8NBE8 558 aa8.8□□□□□ -1
SIK3-203ENST00000415541 PI4K2BQ8TCG2 481 aa8.8□□□□□ -1
SIK3-203ENST00000415541 NYXQ9GZU5 481 aa8.8□□□□□ -1
SIK3-203ENST00000415541 CTAGE9A4FU28 777 aa8.8□□□□□ -1
SIK3-203ENST00000415541 MYO1FO00160 1098 aa8.8□□□□□ -1
SIK3-203ENST00000415541 MYO1BO43795 1136 aa8.8□□□□□ -1
SIK3-203ENST00000415541 OPA1O60313 960 aa8.8□□□□□ -1
SIK3-203ENST00000415541 CCDC175P0C221 793 aa8.8□□□□□ -1
SIK3-203ENST00000415541 RBM5P52756 815 aaKnown RBP eCLIP8.8□□□□□ -1
SIK3-203ENST00000415541 GNGT1P63211 74 aa8.8□□□□□ -1
SIK3-203ENST00000415541 WHAMMP3Q1A5X7 153 aa8.8□□□□□ -1
SIK3-203ENST00000415541 RASEFQ8IZ41 740 aa8.8□□□□□ -1
SIK3-203ENST00000415541 PGBD1Q96JS3 809 aa8.8□□□□□ -1
SIK3-203ENST00000415541 WDR24Q96S15 920 aa8.8□□□□□ -1
SIK3-203ENST00000415541 RUFY1Q96T51 708 aa8.8□□□□□ -1
SIK3-203ENST00000415541 ANKZF1Q9H8Y5 726 aa8.8□□□□□ -1
SIK3-203ENST00000415541 ATP6V0A4Q9HBG4 840 aa8.8□□□□□ -1
SIK3-203ENST00000415541 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.8□□□□□ -1
SIK3-203ENST00000415541 FAM208AQ9UK61 1670 aaKnown RBP8.8□□□□□ -1
SIK3-203ENST00000415541 STX10O60499 249 aa8.8□□□□□ -1
SIK3-203ENST00000415541 RANBP6O60518 1105 aaKnown RBP8.8□□□□□ -1
SIK3-203ENST00000415541 SHOX2O60902 331 aaPredicted RBP8.8□□□□□ -1
SIK3-203ENST00000415541 PSMD2Q13200 908 aa8.8□□□□□ -1
SIK3-203ENST00000415541 DRP2Q13474 957 aa8.8□□□□□ -1
SIK3-203ENST00000415541 MTX1Q13505 466 aa8.8□□□□□ -1
SIK3-203ENST00000415541 PUM3Q15397 648 aaKnown RBP8.8□□□□□ -1
SIK3-203ENST00000415541 TTLL11Q8NHH1 800 aa8.8□□□□□ -1
SIK3-203ENST00000415541 CCDC114Q96M63 670 aa8.8□□□□□ -1
SIK3-203ENST00000415541 UBAC1Q9BSL1 405 aa8.8□□□□□ -1
SIK3-203ENST00000415541 PIK3C2AO00443 1686 aa8.79□□□□□ -1
SIK3-203ENST00000415541 EIF3HO15372 352 aaKnown RBP eCLIP8.79□□□□□ -1
SIK3-203ENST00000415541 ZFYP08048 801 aaPredicted RBP8.79□□□□□ -1
SIK3-203ENST00000415541 PECAM1P16284 738 aaPredicted RBP8.79□□□□□ -1
SIK3-203ENST00000415541 ATP2B2Q01814 1243 aa8.79□□□□□ -1
SIK3-203ENST00000415541 ATL3Q6DD88 541 aa8.79□□□□□ -1
SIK3-203ENST00000415541 Q6ZUG5 572 aa8.79□□□□□ -1
SIK3-203ENST00000415541 SPDL1Q96EA4 605 aa8.79□□□□□ -1
SIK3-203ENST00000415541 ACTR5Q9H9F9 607 aaPredicted RBP8.79□□□□□ -1
SIK3-203ENST00000415541 CDHR2Q9BYE9 1310 aa8.79□□□□□ -1
SIK3-203ENST00000415541 FRMD3A2A2Y4 597 aa8.79□□□□□ -1
SIK3-203ENST00000415541 PEX19P40855 299 aa8.79□□□□□ -1
SIK3-203ENST00000415541 PHKA1P46020 1223 aa8.79□□□□□ -1
SIK3-203ENST00000415541 BCAMP50895 628 aa8.79□□□□□ -1
SIK3-203ENST00000415541 SLMAPQ14BN4 828 aa8.79□□□□□ -1
SIK3-203ENST00000415541 FSIP1Q8NA03 581 aa8.79□□□□□ -1
SIK3-203ENST00000415541 MAGEC3Q8TD91 643 aa8.79□□□□□ -1
SIK3-203ENST00000415541 SCLT1Q96NL6 688 aa8.79□□□□□ -1
SIK3-203ENST00000415541 KIF9Q9HAQ2 790 aa8.79□□□□□ -1
SIK3-203ENST00000415541 ADAMTSL3P82987 1691 aa8.79□□□□□ -1
SIK3-203ENST00000415541 F8W031 263 aaPredicted RBP8.79□□□□□ -1
SIK3-203ENST00000415541 SLC27A2O14975 620 aa8.79□□□□□ -1
SIK3-203ENST00000415541 ECM2O94769 699 aaPredicted RBP8.79□□□□□ -1
SIK3-203ENST00000415541 GYG1P46976 350 aa8.79□□□□□ -1
SIK3-203ENST00000415541 NAP1L1P55209 391 aaKnown RBP8.79□□□□□ -1
SIK3-203ENST00000415541 NKX1-1Q15270 411 aaPredicted RBP8.79□□□□□ -1
SIK3-203ENST00000415541 ERFEQ4G0M1 354 aa8.79□□□□□ -1
SIK3-203ENST00000415541 MSL1Q68DK7 614 aa8.79□□□□□ -1
SIK3-203ENST00000415541 KAZALD1Q96I82 304 aa8.79□□□□□ -1
SIK3-203ENST00000415541 CLIC6Q96NY7 704 aa8.79□□□□□ -1
SIK3-203ENST00000415541 KAT14Q9H8E8 782 aa8.79□□□□□ -1
SIK3-203ENST00000415541 MARF1Q9Y4F3 1742 aaKnown RBP8.79□□□□□ -1
SIK3-203ENST00000415541 N4BP2Q86UW6 1770 aaPredicted RBP8.78□□□□□ -1
SIK3-203ENST00000415541 OVOS2A0A0G2JMS6 1433 aa8.78□□□□□ -1
SIK3-203ENST00000415541 GOLGA8KD6RF30 607 aa8.78□□□□□ -1
SIK3-203ENST00000415541 IFIT3O14879 490 aaKnown RBP8.78□□□□□ -1
SIK3-203ENST00000415541 RIMBP2O15034 1052 aa8.78□□□□□ -1
SIK3-203ENST00000415541 ME1P48163 572 aa8.78□□□□□ -1
SIK3-203ENST00000415541 RPS6KA3P51812 740 aa8.78□□□□□ -1
SIK3-203ENST00000415541 MICU3Q86XE3 530 aa8.78□□□□□ -1
SIK3-203ENST00000415541 MICAL1Q8TDZ2 1067 aa8.78□□□□□ -1
SIK3-203ENST00000415541 LPIN2Q92539 896 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms