RNA–Protein interactions for RNA: ENST00000415537.1

HLA-C-204, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 782 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-204ENST00000415537 EVX2Q03828 476 aa30.06■■■□□ 2.4
HLA-C-204ENST00000415537 SEPT2Q15019 361 aa30.06■■■□□ 2.4
HLA-C-204ENST00000415537 PUS7LQ9H0K6 701 aaKnown RBP30.06■■■□□ 2.4
HLA-C-204ENST00000415537 USP17L15C9J2P7 530 aa30.05■■■□□ 2.4
HLA-C-204ENST00000415537 USP17L13C9JLJ4 530 aa30.05■■■□□ 2.4
HLA-C-204ENST00000415537 USP17L11C9JVI0 530 aa30.05■■■□□ 2.4
HLA-C-204ENST00000415537 USP17L18D6R9N7 530 aa30.05■■■□□ 2.4
HLA-C-204ENST00000415537 USP17L22D6RA61 530 aa30.05■■■□□ 2.4
HLA-C-204ENST00000415537 USP17L17D6RBQ6 530 aa30.05■■■□□ 2.4
HLA-C-204ENST00000415537 USP17L19D6RCP7 530 aa30.05■■■□□ 2.4
HLA-C-204ENST00000415537 USP17L20D6RJB6 530 aa30.05■■■□□ 2.4
HLA-C-204ENST00000415537 USP17L24Q0WX57 530 aa30.05■■■□□ 2.4
HLA-C-204ENST00000415537 TSHZ3Q63HK5 1081 aa30.05■■■□□ 2.4
HLA-C-204ENST00000415537 KBTBD3Q8NAB2 608 aa30.05■■■□□ 2.4
HLA-C-204ENST00000415537 ACER1Q8TDN7 264 aa30.05■■■□□ 2.4
HLA-C-204ENST00000415537 GUCY1A2P33402 732 aa30.04■■■□□ 2.4
HLA-C-204ENST00000415537 CCAR1Q8IX12 1150 aaKnown RBP30.04■■■□□ 2.4
HLA-C-204ENST00000415537 DYNLL2Q96FJ2 89 aa30.04■■■□□ 2.4
HLA-C-204ENST00000415537 ZBTB47Q9UFB7 747 aaPredicted RBP30.04■■■□□ 2.4
HLA-C-204ENST00000415537 USP17L12C9JPN9 530 aa30.03■■■□□ 2.4
HLA-C-204ENST00000415537 USP17L21D6R901 530 aa30.03■■■□□ 2.4
HLA-C-204ENST00000415537 GJB1P08034 283 aa30.03■■■□□ 2.4
HLA-C-204ENST00000415537 SLC44A5Q8NCS7 719 aa30.03■■■□□ 2.4
HLA-C-204ENST00000415537 CRBNQ96SW2 442 aa30.03■■■□□ 2.4
HLA-C-204ENST00000415537 PAGR1Q9BTK6 254 aa30.03■■■□□ 2.4
HLA-C-204ENST00000415537 TXNRD2Q9NNW7 524 aa30.03■■■□□ 2.4
HLA-C-204ENST00000415537 MKI67P46013 3256 aaKnown RBP30.02■■■□□ 2.4
HLA-C-204ENST00000415537 TTC41PQ6P2S7 1318 aa30.02■■■□□ 2.4
HLA-C-204ENST00000415537 ERC2O15083 957 aa30.02■■■□□ 2.4
HLA-C-204ENST00000415537 INHAP05111 366 aa30.02■■■□□ 2.4
HLA-C-204ENST00000415537 C12orf60Q5U649 245 aa30.02■■■□□ 2.4
HLA-C-204ENST00000415537 TMEM179Q6ZVK1 233 aa30.02■■■□□ 2.4
HLA-C-204ENST00000415537 RBPJLQ9UBG7 517 aa30.02■■■□□ 2.4
HLA-C-204ENST00000415537 VCAM1P19320 739 aa30.01■■■□□ 2.39
HLA-C-204ENST00000415537 GJA8P48165 433 aa30.01■■■□□ 2.39
HLA-C-204ENST00000415537 ERVK-9P63128 1117 aa30.01■■■□□ 2.39
HLA-C-204ENST00000415537 ERVK-24P63145 666 aa30.01■■■□□ 2.39
HLA-C-204ENST00000415537 LRRFIP1Q32MZ4 808 aaKnown RBP30.01■■■□□ 2.39
HLA-C-204ENST00000415537 CATSPERGQ6ZRH7 1159 aa30.01■■■□□ 2.39
HLA-C-204ENST00000415537 UNC93B1Q9H1C4 597 aa30.01■■■□□ 2.39
HLA-C-204ENST00000415537 PEX10O60683 326 aa30■■■□□ 2.39
HLA-C-204ENST00000415537 ZFYP08048 801 aaPredicted RBP30■■■□□ 2.39
HLA-C-204ENST00000415537 MAPK4P31152 587 aa30■■■□□ 2.39
HLA-C-204ENST00000415537 GJD2Q9UKL4 321 aa30■■■□□ 2.39
HLA-C-204ENST00000415537 CYP2D7A0A087X1C5 515 aa29.99■■■□□ 2.39
HLA-C-204ENST00000415537 RNF113AO15541 343 aaKnown RBP29.99■■■□□ 2.39
HLA-C-204ENST00000415537 CDK8P49336 464 aa29.99■■■□□ 2.39
HLA-C-204ENST00000415537 Q3C1V9 767 aa29.99■■■□□ 2.39
HLA-C-204ENST00000415537 CTR9Q6PD62 1173 aa29.99■■■□□ 2.39
HLA-C-204ENST00000415537 APPBP2Q92624 585 aa29.99■■■□□ 2.39
HLA-C-204ENST00000415537 CCDC17Q96LX7 622 aa29.99■■■□□ 2.39
HLA-C-204ENST00000415537 STRBPQ96SI9 672 aaKnown RBP29.99■■■□□ 2.39
HLA-C-204ENST00000415537 RPAP3Q9H6T3 665 aaPredicted RBP29.99■■■□□ 2.39
HLA-C-204ENST00000415537 NUDT12Q9BQG2 462 aa29.98■■■□□ 2.39
HLA-C-204ENST00000415537 ARHGEF10LQ9HCE6 1279 aa29.98■■■□□ 2.39
HLA-C-204ENST00000415537 CWC22Q9HCG8 908 aaKnown RBP29.98■■■□□ 2.39
HLA-C-204ENST00000415537 ARPP21Q9UBL0 812 aaPredicted RBP29.98■■■□□ 2.39
HLA-C-204ENST00000415537 RABGAP1Q9Y3P9 1069 aa29.98■■■□□ 2.39
HLA-C-204ENST00000415537 PLXNB2O15031 1838 aa29.97■■■□□ 2.39
HLA-C-204ENST00000415537 GLRX3O76003 335 aaKnown RBP29.97■■■□□ 2.39
HLA-C-204ENST00000415537 AKR1B1P15121 316 aa29.97■■■□□ 2.39
HLA-C-204ENST00000415537 C16orf86Q6ZW13 317 aa29.97■■■□□ 2.39
HLA-C-204ENST00000415537 SHISA4Q96DD7 197 aa29.97■■■□□ 2.39
HLA-C-204ENST00000415537 A0A1W2PRG0 241 aa29.96■■■□□ 2.39
HLA-C-204ENST00000415537 HMGCRP04035 888 aa29.96■■■□□ 2.39
HLA-C-204ENST00000415537 CCNA1P78396 465 aa29.96■■■□□ 2.39
HLA-C-204ENST00000415537 U2AF1L4Q8WU68 220 aaKnown RBP29.96■■■□□ 2.39
HLA-C-204ENST00000415537 SOCS4Q8WXH5 440 aa29.96■■■□□ 2.39
HLA-C-204ENST00000415537 OSBP2Q969R2 916 aa29.96■■■□□ 2.39
HLA-C-204ENST00000415537 SH2D4AQ9H788 454 aa29.96■■■□□ 2.39
HLA-C-204ENST00000415537 SGPL1O95470 568 aa29.95■■■□□ 2.39
HLA-C-204ENST00000415537 MX1P20591 662 aa29.95■■■□□ 2.39
HLA-C-204ENST00000415537 CYP2B6P20813 491 aa29.95■■■□□ 2.39
HLA-C-204ENST00000415537 ICA1Q05084 483 aa29.95■■■□□ 2.39
HLA-C-204ENST00000415537 ANKRD45Q5TZF3 282 aa29.95■■■□□ 2.39
HLA-C-204ENST00000415537 SMIM22K7EJ46 135 aa29.94■■■□□ 2.38
HLA-C-204ENST00000415537 GNAT2P19087 354 aa29.94■■■□□ 2.38
HLA-C-204ENST00000415537 GIMAP6Q6P9H5 292 aa29.94■■■□□ 2.38
HLA-C-204ENST00000415537 PI4K2BQ8TCG2 481 aa29.94■■■□□ 2.38
HLA-C-204ENST00000415537 GCC1Q96CN9 775 aa29.94■■■□□ 2.38
HLA-C-204ENST00000415537 PORCNQ9H237 461 aa29.94■■■□□ 2.38
HLA-C-204ENST00000415537 POTEEQ6S8J3 1075 aa29.93■■■□□ 2.38
HLA-C-204ENST00000415537 GPR142Q7Z601 462 aa29.93■■■□□ 2.38
HLA-C-204ENST00000415537 PLEKHH3Q7Z736 793 aa29.93■■■□□ 2.38
HLA-C-204ENST00000415537 OTUD7AQ8TE49 926 aaPredicted RBP29.93■■■□□ 2.38
HLA-C-204ENST00000415537 DEFB118Q96PH6 123 aa29.93■■■□□ 2.38
HLA-C-204ENST00000415537 TANGO6Q9C0B7 1094 aa29.93■■■□□ 2.38
HLA-C-204ENST00000415537 GSG1L2A8MUP6 293 aa29.92■■■□□ 2.38
HLA-C-204ENST00000415537 GPAA1O43292 621 aa29.92■■■□□ 2.38
HLA-C-204ENST00000415537 TFRCP02786 760 aaKnown RBP29.92■■■□□ 2.38
HLA-C-204ENST00000415537 APPP05067 770 aa29.92■■■□□ 2.38
HLA-C-204ENST00000415537 CAPN2P17655 700 aa29.92■■■□□ 2.38
HLA-C-204ENST00000415537 COG2Q14746 738 aa29.92■■■□□ 2.38
HLA-C-204ENST00000415537 SBK1Q52WX2 424 aa29.92■■■□□ 2.38
HLA-C-204ENST00000415537 LBX2Q6XYB7 198 aa29.92■■■□□ 2.38
HLA-C-204ENST00000415537 LPAR1Q92633 364 aa29.92■■■□□ 2.38
HLA-C-204ENST00000415537 FSD1Q9BTV5 496 aa29.92■■■□□ 2.38
HLA-C-204ENST00000415537 HOXC10Q9NYD6 342 aa29.92■■■□□ 2.38
HLA-C-204ENST00000415537 SPDYE16A6NNV3 312 aaPredicted RBP29.91■■■□□ 2.38
HLA-C-204ENST00000415537 MINDY4BA8MYZ0 360 aa29.91■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms