RNA–Protein interactions for RNA: ENST00000415030.6

SCN4B-202, Transcript of sodium voltage-gated channel beta subunit 4, humanhuman

TSL 1 (best)

Gene SCN4B, Length 4,480 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4B-202ENST00000415030 EIF3CLB5ME19 914 aaKnown RBP13.04□□□□□ -0.32
SCN4B-202ENST00000415030 RFX5P48382 616 aaPredicted RBP13.04□□□□□ -0.32
SCN4B-202ENST00000415030 WWC2Q6AWC2 1192 aa13.04□□□□□ -0.32
SCN4B-202ENST00000415030 EIF3CQ99613 913 aaKnown RBP13.04□□□□□ -0.32
SCN4B-202ENST00000415030 KCNJ14Q9UNX9 436 aa13.04□□□□□ -0.32
SCN4B-202ENST00000415030 HPSEQ9Y251 543 aa13.04□□□□□ -0.32
SCN4B-202ENST00000415030 MINDY4BA8MYZ0 360 aa13.03□□□□□ -0.32
SCN4B-202ENST00000415030 IDEP14735 1019 aa13.03□□□□□ -0.32
SCN4B-202ENST00000415030 MYL10Q9BUA6 226 aa13.03□□□□□ -0.32
SCN4B-202ENST00000415030 MMP1P03956 469 aa13.03□□□□□ -0.32
SCN4B-202ENST00000415030 CALM1P0DP23 149 aa13.03□□□□□ -0.32
SCN4B-202ENST00000415030 CALM2P0DP24 149 aa13.03□□□□□ -0.32
SCN4B-202ENST00000415030 CALM3P0DP25 149 aa13.03□□□□□ -0.32
SCN4B-202ENST00000415030 IFNAR1P17181 557 aa13.03□□□□□ -0.32
SCN4B-202ENST00000415030 STAT6P42226 847 aa13.03□□□□□ -0.32
SCN4B-202ENST00000415030 VAV2P52735 878 aa13.03□□□□□ -0.32
SCN4B-202ENST00000415030 CCDC96Q2M329 555 aa13.03□□□□□ -0.32
SCN4B-202ENST00000415030 ILDR1Q86SU0 546 aaPredicted RBP13.03□□□□□ -0.32
SCN4B-202ENST00000415030 AIFM3Q96NN9 605 aa13.03□□□□□ -0.32
SCN4B-202ENST00000415030 MYCBPQ99417 103 aaPredicted RBP13.03□□□□□ -0.32
SCN4B-202ENST00000415030 VIPAS39Q9H9C1 493 aa13.03□□□□□ -0.32
SCN4B-202ENST00000415030 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.03□□□□□ -0.32
SCN4B-202ENST00000415030 TAB2Q9NYJ8 693 aa13.03□□□□□ -0.32
SCN4B-202ENST00000415030 MROH7-TTC4A0A0A0MT08 1334 aa13.03□□□□□ -0.32
SCN4B-202ENST00000415030 OVOS2A0A0G2JMS6 1433 aa13.03□□□□□ -0.32
SCN4B-202ENST00000415030 H7C1W4 665 aa13.03□□□□□ -0.32
SCN4B-202ENST00000415030 UBE3CQ15386 1083 aa13.03□□□□□ -0.32
SCN4B-202ENST00000415030 CCDC42Q96M95 316 aa13.03□□□□□ -0.32
SCN4B-202ENST00000415030 A0A1B0GTH6 734 aa13.03□□□□□ -0.32
SCN4B-202ENST00000415030 PHKG2P15735 406 aa13.03□□□□□ -0.32
SCN4B-202ENST00000415030 LIFRP42702 1097 aa13.03□□□□□ -0.32
SCN4B-202ENST00000415030 SPATS2Q86XZ4 545 aaKnown RBP13.03□□□□□ -0.32
SCN4B-202ENST00000415030 ZBTB9Q96C00 473 aa13.03□□□□□ -0.32
SCN4B-202ENST00000415030 IQSEC3Q9UPP2 1182 aaPredicted RBP13.03□□□□□ -0.32
SCN4B-202ENST00000415030 GOLGA8KD6RF30 607 aa13.02□□□□□ -0.32
SCN4B-202ENST00000415030 UBA7P41226 1012 aa13.02□□□□□ -0.32
SCN4B-202ENST00000415030 MORC3Q14149 939 aa13.02□□□□□ -0.32
SCN4B-202ENST00000415030 MSANTD4Q8NCY6 345 aa13.02□□□□□ -0.32
SCN4B-202ENST00000415030 MTMR7Q9Y216 660 aa13.02□□□□□ -0.32
SCN4B-202ENST00000415030 FAM208AQ9UK61 1670 aaKnown RBP13.02□□□□□ -0.32
SCN4B-202ENST00000415030 CALRP27797 417 aaKnown RBP13.02□□□□□ -0.33
SCN4B-202ENST00000415030 CDC5LQ99459 802 aaKnown RBP13.02□□□□□ -0.33
SCN4B-202ENST00000415030 SLC4A4Q9Y6R1 1079 aa13.02□□□□□ -0.33
SCN4B-202ENST00000415030 AKAP12Q02952 1782 aa13.02□□□□□ -0.33
SCN4B-202ENST00000415030 AKR1B10O60218 316 aa13.02□□□□□ -0.33
SCN4B-202ENST00000415030 SASH3O75995 380 aa13.02□□□□□ -0.33
SCN4B-202ENST00000415030 BEND6Q5SZJ8 279 aaPredicted RBP13.02□□□□□ -0.33
SCN4B-202ENST00000415030 RNF187Q5TA31 235 aaPredicted RBP13.02□□□□□ -0.33
SCN4B-202ENST00000415030 TAF4BQ92750 862 aa13.02□□□□□ -0.33
SCN4B-202ENST00000415030 RBM28Q9NW13 759 aaKnown RBP13.02□□□□□ -0.33
SCN4B-202ENST00000415030 BICDL2A1A5D9 508 aa13.02□□□□□ -0.33
SCN4B-202ENST00000415030 TRIM66O15016 1216 aa13.02□□□□□ -0.33
SCN4B-202ENST00000415030 PPP1R2P41236 205 aa13.02□□□□□ -0.33
SCN4B-202ENST00000415030 COPB1P53618 953 aaKnown RBP13.02□□□□□ -0.33
SCN4B-202ENST00000415030 NR1I3Q14994 352 aa13.02□□□□□ -0.33
SCN4B-202ENST00000415030 AKNAD1Q5T1N1 836 aa13.02□□□□□ -0.33
SCN4B-202ENST00000415030 RASGRP2Q7LDG7 609 aa13.02□□□□□ -0.33
SCN4B-202ENST00000415030 MSL3Q8N5Y2 521 aaKnown RBP13.02□□□□□ -0.33
SCN4B-202ENST00000415030 ACRBPQ8NEB7 543 aa13.02□□□□□ -0.33
SCN4B-202ENST00000415030 XRN1Q8IZH2 1706 aaKnown RBP13.01□□□□□ -0.33
SCN4B-202ENST00000415030 ABCC12Q96J65 1359 aa13.01□□□□□ -0.33
SCN4B-202ENST00000415030 KCNJ18B7U540 433 aa13.01□□□□□ -0.33
SCN4B-202ENST00000415030 NDUFAB1O14561 156 aa13.01□□□□□ -0.33
SCN4B-202ENST00000415030 COL9A3Q14050 684 aaPredicted RBP13.01□□□□□ -0.33
SCN4B-202ENST00000415030 KCNJ12Q14500 433 aa13.01□□□□□ -0.33
SCN4B-202ENST00000415030 ARFGAP2Q8N6H7 521 aa13.01□□□□□ -0.33
SCN4B-202ENST00000415030 ZNF622Q969S3 477 aaKnown RBP eCLIP13.01□□□□□ -0.33
SCN4B-202ENST00000415030 CSRNP2Q9H175 543 aa13.01□□□□□ -0.33
SCN4B-202ENST00000415030 MRPL44Q9H9J2 332 aaKnown RBP13.01□□□□□ -0.33
SCN4B-202ENST00000415030 CPDO75976 1380 aa13.01□□□□□ -0.33
SCN4B-202ENST00000415030 H7C1D1 291 aa13.01□□□□□ -0.33
SCN4B-202ENST00000415030 CHGBP05060 677 aa13.01□□□□□ -0.33
SCN4B-202ENST00000415030 ARHGAP25P42331 645 aa13.01□□□□□ -0.33
SCN4B-202ENST00000415030 NELFBQ8WX92 580 aa13.01□□□□□ -0.33
SCN4B-202ENST00000415030 RPGRQ92834 1020 aaKnown RBP13.01□□□□□ -0.33
SCN4B-202ENST00000415030 IQCDQ96DY2 449 aa13.01□□□□□ -0.33
SCN4B-202ENST00000415030 CAPS2Q9BXY5 557 aa13.01□□□□□ -0.33
SCN4B-202ENST00000415030 ZNF532Q9HCE3 1301 aa13.01□□□□□ -0.33
SCN4B-202ENST00000415030 RANBP6O60518 1105 aaKnown RBP13.01□□□□□ -0.33
SCN4B-202ENST00000415030 MATR3P43243 847 aaKnown RBP eCLIP13.01□□□□□ -0.33
SCN4B-202ENST00000415030 AMPD3Q01432 767 aa13.01□□□□□ -0.33
SCN4B-202ENST00000415030 SECISBP2LQ93073 1101 aaKnown RBP13.01□□□□□ -0.33
SCN4B-202ENST00000415030 CDK5RAP3Q96JB5 506 aa13.01□□□□□ -0.33
SCN4B-202ENST00000415030 PUS7LQ9H0K6 701 aaKnown RBP13.01□□□□□ -0.33
SCN4B-202ENST00000415030 MAP3K15Q6ZN16 1313 aa13□□□□□ -0.33
SCN4B-202ENST00000415030 CCDC194A0A1B0GVG4 234 aa13□□□□□ -0.33
SCN4B-202ENST00000415030 PATL2C9JE40 543 aaKnown RBP13□□□□□ -0.33
SCN4B-202ENST00000415030 MBD4O95243 580 aa13□□□□□ -0.33
SCN4B-202ENST00000415030 TTC38Q5R3I4 469 aa13□□□□□ -0.33
SCN4B-202ENST00000415030 IFIT1BQ5T764 474 aaKnown RBP13□□□□□ -0.33
SCN4B-202ENST00000415030 CENPHQ9H3R5 247 aa13□□□□□ -0.33
SCN4B-202ENST00000415030 RIMBP3CA6NJZ7 1639 aa13□□□□□ -0.33
SCN4B-202ENST00000415030 RIMBP3BA6NNM3 1639 aa13□□□□□ -0.33
SCN4B-202ENST00000415030 RIMBP3Q9UFD9 1639 aa13□□□□□ -0.33
SCN4B-202ENST00000415030 USP5P45974 858 aa13□□□□□ -0.33
SCN4B-202ENST00000415030 VSNL1P62760 191 aa13□□□□□ -0.33
SCN4B-202ENST00000415030 TBX2Q13207 712 aaPredicted RBP13□□□□□ -0.33
SCN4B-202ENST00000415030 SND1Q7KZF4 910 aaKnown RBP eCLIP13□□□□□ -0.33
SCN4B-202ENST00000415030 CACNA2D4Q7Z3S7 1137 aa13□□□□□ -0.33
SCN4B-202ENST00000415030 TADA2BQ86TJ2 420 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms