RNA–Protein interactions for RNA: ENST00000414883.1

A1CF-208, Transcript of APOBEC1 complementation factor, humanhuman

TSL 5

Gene A1CF, Length 885 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-208ENST00000414883 SOX10P56693 466 aa13.15□□□□□ -0.3
A1CF-208ENST00000414883 ABCB5Q2M3G0 1257 aa13.15□□□□□ -0.3
A1CF-208ENST00000414883 ZMYM1Q5SVZ6 1142 aa13.15□□□□□ -0.3
A1CF-208ENST00000414883 C16orf86Q6ZW13 317 aa13.15□□□□□ -0.3
A1CF-208ENST00000414883 C12orf42Q96LP6 360 aa13.15□□□□□ -0.3
A1CF-208ENST00000414883 SEC62Q99442 399 aaKnown RBP13.15□□□□□ -0.3
A1CF-208ENST00000414883 TAOK2Q9UL54 1235 aa13.15□□□□□ -0.3
A1CF-208ENST00000414883 PARP14Q460N5 1801 aa13.15□□□□□ -0.3
A1CF-208ENST00000414883 A0A1W2PRG0 241 aa13.14□□□□□ -0.31
A1CF-208ENST00000414883 GPAA1O43292 621 aa13.14□□□□□ -0.31
A1CF-208ENST00000414883 OSBPP22059 807 aa13.14□□□□□ -0.31
A1CF-208ENST00000414883 CDK8P49336 464 aa13.14□□□□□ -0.31
A1CF-208ENST00000414883 NUCB1Q02818 461 aa13.14□□□□□ -0.31
A1CF-208ENST00000414883 SEPT2Q15019 361 aa13.14□□□□□ -0.31
A1CF-208ENST00000414883 SBK1Q52WX2 424 aa13.14□□□□□ -0.31
A1CF-208ENST00000414883 GIMAP6Q6P9H5 292 aa13.14□□□□□ -0.31
A1CF-208ENST00000414883 LNPKQ9C0E8 428 aa13.14□□□□□ -0.31
A1CF-208ENST00000414883 KIAA1683Q9H0B3 1180 aa13.14□□□□□ -0.31
A1CF-208ENST00000414883 RWDD1Q9H446 243 aaPredicted RBP13.14□□□□□ -0.31
A1CF-208ENST00000414883 SRRDQ9UH36 339 aa13.14□□□□□ -0.31
A1CF-208ENST00000414883 ROBO3Q96MS0 1386 aa13.14□□□□□ -0.31
A1CF-208ENST00000414883 PEX10O60683 326 aa13.13□□□□□ -0.31
A1CF-208ENST00000414883 ECM2O94769 699 aaPredicted RBP13.13□□□□□ -0.31
A1CF-208ENST00000414883 GNRH1P01148 92 aa13.13□□□□□ -0.31
A1CF-208ENST00000414883 AKR1B1P15121 316 aa13.13□□□□□ -0.31
A1CF-208ENST00000414883 RAB3GAP1Q15042 981 aa13.13□□□□□ -0.31
A1CF-208ENST00000414883 KIAA1755Q5JYT7 1200 aa13.13□□□□□ -0.31
A1CF-208ENST00000414883 CLEC10AQ8IUN9 316 aa13.13□□□□□ -0.31
A1CF-208ENST00000414883 ANKRD13CQ8N6S4 541 aa13.13□□□□□ -0.31
A1CF-208ENST00000414883 ZNF333Q96JL9 665 aa13.13□□□□□ -0.31
A1CF-208ENST00000414883 P2RX7Q99572 595 aaKnown RBP13.13□□□□□ -0.31
A1CF-208ENST00000414883 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.13□□□□□ -0.31
A1CF-208ENST00000414883 TXNRD2Q9NNW7 524 aa13.13□□□□□ -0.31
A1CF-208ENST00000414883 RTN4Q9NQC3 1192 aaKnown RBP13.13□□□□□ -0.31
A1CF-208ENST00000414883 MORF4L1Q9UBU8 362 aa13.13□□□□□ -0.31
A1CF-208ENST00000414883 SWAP70Q9UH65 585 aa13.13□□□□□ -0.31
A1CF-208ENST00000414883 RANBP2P49792 3224 aaKnown RBP13.13□□□□□ -0.31
A1CF-208ENST00000414883 KIF22Q14807 665 aa13.12□□□□□ -0.31
A1CF-208ENST00000414883 FAM110CQ1W6H9 321 aa13.12□□□□□ -0.31
A1CF-208ENST00000414883 USP17L2Q6R6M4 530 aa13.12□□□□□ -0.31
A1CF-208ENST00000414883 CHD1LQ86WJ1 897 aa13.12□□□□□ -0.31
A1CF-208ENST00000414883 PLEKHM2Q8IWE5 1019 aa13.12□□□□□ -0.31
A1CF-208ENST00000414883 SMCR8Q8TEV9 937 aaPredicted RBP13.12□□□□□ -0.31
A1CF-208ENST00000414883 TMOD4Q9NZQ9 345 aa13.12□□□□□ -0.31
A1CF-208ENST00000414883 PNMA3Q9UL41 463 aa13.12□□□□□ -0.31
A1CF-208ENST00000414883 GABRQQ9UN88 632 aa13.12□□□□□ -0.31
A1CF-208ENST00000414883 A0A0G2JMZ2 1700 aa13.11□□□□□ -0.31
A1CF-208ENST00000414883 POTEFA5A3E0 1075 aa13.11□□□□□ -0.31
A1CF-208ENST00000414883 VCAM1P19320 739 aa13.11□□□□□ -0.31
A1CF-208ENST00000414883 GCLCP48506 637 aaPredicted RBP13.11□□□□□ -0.31
A1CF-208ENST00000414883 PRMT2P55345 433 aa13.11□□□□□ -0.31
A1CF-208ENST00000414883 HERVK_113P62684 666 aa13.11□□□□□ -0.31
A1CF-208ENST00000414883 IRX6P78412 446 aaPredicted RBP13.11□□□□□ -0.31
A1CF-208ENST00000414883 PRKCZQ05513 592 aa13.11□□□□□ -0.31
A1CF-208ENST00000414883 PABPC4Q13310 644 aaKnown RBP eCLIP13.11□□□□□ -0.31
A1CF-208ENST00000414883 ARHGEF6Q15052 776 aa13.11□□□□□ -0.31
A1CF-208ENST00000414883 ZYXQ15942 572 aaKnown RBP13.11□□□□□ -0.31
A1CF-208ENST00000414883 B4GALNT3Q6L9W6 998 aa13.11□□□□□ -0.31
A1CF-208ENST00000414883 TMEM179Q6ZVK1 233 aa13.11□□□□□ -0.31
A1CF-208ENST00000414883 FSD1Q9BTV5 496 aa13.11□□□□□ -0.31
A1CF-208ENST00000414883 OSBPL3Q9H4L5 887 aa13.11□□□□□ -0.31
A1CF-208ENST00000414883 RBPJLQ9UBG7 517 aa13.11□□□□□ -0.31
A1CF-208ENST00000414883 ARPP21Q9UBL0 812 aaPredicted RBP13.11□□□□□ -0.31
A1CF-208ENST00000414883 MYH4Q9Y623 1939 aa13.1□□□□□ -0.31
A1CF-208ENST00000414883 CEP290O15078 2479 aa13.1□□□□□ -0.31
A1CF-208ENST00000414883 PATL2C9JE40 543 aaKnown RBP13.1□□□□□ -0.31
A1CF-208ENST00000414883 CNMDO75829 334 aa13.1□□□□□ -0.31
A1CF-208ENST00000414883 FMNL1O95466 1100 aaPredicted RBP13.1□□□□□ -0.31
A1CF-208ENST00000414883 RASA1P20936 1047 aa13.1□□□□□ -0.31
A1CF-208ENST00000414883 Q3C1V9 767 aa13.1□□□□□ -0.31
A1CF-208ENST00000414883 CATSPERGQ6ZRH7 1159 aa13.1□□□□□ -0.31
A1CF-208ENST00000414883 CCDC129Q6ZRS4 1044 aa13.1□□□□□ -0.31
A1CF-208ENST00000414883 IFNL3Q8IZI9 196 aa13.1□□□□□ -0.31
A1CF-208ENST00000414883 SH3TC2Q8TF17 1288 aa13.1□□□□□ -0.31
A1CF-208ENST00000414883 EVI5LQ96CN4 794 aa13.1□□□□□ -0.31
A1CF-208ENST00000414883 CCDC17Q96LX7 622 aa13.1□□□□□ -0.31
A1CF-208ENST00000414883 CABP5Q9NP86 173 aa13.1□□□□□ -0.31
A1CF-208ENST00000414883 MYPNQ86TC9 1320 aa13.1□□□□□ -0.31
A1CF-208ENST00000414883 GNAT2P19087 354 aa13.09□□□□□ -0.31
A1CF-208ENST00000414883 USP14P54578 494 aa13.09□□□□□ -0.31
A1CF-208ENST00000414883 FCGRTP55899 365 aa13.09□□□□□ -0.31
A1CF-208ENST00000414883 IRX3P78415 501 aaPredicted RBP13.09□□□□□ -0.31
A1CF-208ENST00000414883 LRRFIP1Q32MZ4 808 aaKnown RBP13.09□□□□□ -0.31
A1CF-208ENST00000414883 SLC9C1Q4G0N8 1177 aa13.09□□□□□ -0.31
A1CF-208ENST00000414883 VPS53Q5VIR6 699 aa13.09□□□□□ -0.31
A1CF-208ENST00000414883 LBX2Q6XYB7 198 aa13.09□□□□□ -0.31
A1CF-208ENST00000414883 FAM227BQ96M60 508 aa13.09□□□□□ -0.31
A1CF-208ENST00000414883 GJD2Q9UKL4 321 aa13.09□□□□□ -0.31
A1CF-208ENST00000414883 TMX2Q9Y320 296 aa13.09□□□□□ -0.31
A1CF-208ENST00000414883 TACC3Q9Y6A5 838 aa13.09□□□□□ -0.31
A1CF-208ENST00000414883 COL11A1P12107 1806 aaPredicted RBP13.09□□□□□ -0.31
A1CF-208ENST00000414883 IGKV6D-41A0A0C4DH26 115 aa13.08□□□□□ -0.32
A1CF-208ENST00000414883 A0A0D9SFI3 127 aa13.08□□□□□ -0.32
A1CF-208ENST00000414883 USP17L15C9J2P7 530 aa13.08□□□□□ -0.32
A1CF-208ENST00000414883 USP17L13C9JLJ4 530 aa13.08□□□□□ -0.32
A1CF-208ENST00000414883 USP17L11C9JVI0 530 aa13.08□□□□□ -0.32
A1CF-208ENST00000414883 USP17L18D6R9N7 530 aa13.08□□□□□ -0.32
A1CF-208ENST00000414883 USP17L22D6RA61 530 aa13.08□□□□□ -0.32
A1CF-208ENST00000414883 USP17L17D6RBQ6 530 aa13.08□□□□□ -0.32
A1CF-208ENST00000414883 USP17L19D6RCP7 530 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms