RNA–Protein interactions for RNA: ENST00000414057.6

SCAMP4-204, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 1 (best)

Gene SCAMP4, Length 1,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-204ENST00000414057 ADCY3O60266 1144 aa20.22■□□□□ 0.83
SCAMP4-204ENST00000414057 ADD2P35612 726 aa20.22■□□□□ 0.83
SCAMP4-204ENST00000414057 USP14P54578 494 aa20.22■□□□□ 0.83
SCAMP4-204ENST00000414057 TICAM2Q86XR7 235 aa20.22■□□□□ 0.83
SCAMP4-204ENST00000414057 LOC285556D6RIA3 1793 aa20.22■□□□□ 0.83
SCAMP4-204ENST00000414057 CDK5RAP2Q96SN8 1893 aa20.21■□□□□ 0.83
SCAMP4-204ENST00000414057 CAPN2P17655 700 aa20.21■□□□□ 0.83
SCAMP4-204ENST00000414057 PLCD1P51178 756 aa20.21■□□□□ 0.83
SCAMP4-204ENST00000414057 RAB3GAP1Q15042 981 aa20.21■□□□□ 0.83
SCAMP4-204ENST00000414057 UBE3CQ15386 1083 aa20.21■□□□□ 0.83
SCAMP4-204ENST00000414057 MTFR1Q15390 333 aa20.21■□□□□ 0.83
SCAMP4-204ENST00000414057 AMOTL1Q8IY63 956 aa20.21■□□□□ 0.83
SCAMP4-204ENST00000414057 RILPL2Q969X0 211 aa20.21■□□□□ 0.83
SCAMP4-204ENST00000414057 EVI5LQ96CN4 794 aa20.21■□□□□ 0.83
SCAMP4-204ENST00000414057 DDRGK1Q96HY6 314 aa20.21■□□□□ 0.83
SCAMP4-204ENST00000414057 RNF208Q9H0X6 261 aa20.21■□□□□ 0.83
SCAMP4-204ENST00000414057 MORF4L1Q9UBU8 362 aa20.21■□□□□ 0.83
SCAMP4-204ENST00000414057 GJB1P08034 283 aa20.2■□□□□ 0.82
SCAMP4-204ENST00000414057 CCL5P13501 91 aa20.2■□□□□ 0.82
SCAMP4-204ENST00000414057 EDC3Q96F86 508 aaKnown RBP20.2■□□□□ 0.82
SCAMP4-204ENST00000414057 C12orf42Q96LP6 360 aa20.2■□□□□ 0.82
SCAMP4-204ENST00000414057 DCP1AQ9NPI6 582 aaPredicted RBP20.2■□□□□ 0.82
SCAMP4-204ENST00000414057 ATP8A2Q9NTI2 1148 aa20.2■□□□□ 0.82
SCAMP4-204ENST00000414057 HERVK_113P62684 666 aa20.19■□□□□ 0.82
SCAMP4-204ENST00000414057 LCORLQ8N3X6 602 aa20.19■□□□□ 0.82
SCAMP4-204ENST00000414057 GPRC5AQ8NFJ5 357 aa20.19■□□□□ 0.82
SCAMP4-204ENST00000414057 SDR42E1Q8WUS8 393 aa20.19■□□□□ 0.82
SCAMP4-204ENST00000414057 ARMT1Q9H993 441 aa20.19■□□□□ 0.82
SCAMP4-204ENST00000414057 SWAP70Q9UH65 585 aa20.19■□□□□ 0.82
SCAMP4-204ENST00000414057 MYH1P12882 1939 aa20.19■□□□□ 0.82
SCAMP4-204ENST00000414057 HIP1O00291 1037 aa20.18■□□□□ 0.82
SCAMP4-204ENST00000414057 SEC24BO95487 1268 aa20.18■□□□□ 0.82
SCAMP4-204ENST00000414057 SHMT1P34896 483 aa20.18■□□□□ 0.82
SCAMP4-204ENST00000414057 GABPAQ06546 454 aa20.18■□□□□ 0.82
SCAMP4-204ENST00000414057 SHROOM1Q2M3G4 852 aaPredicted RBP20.18■□□□□ 0.82
SCAMP4-204ENST00000414057 CCAR1Q8IX12 1150 aaKnown RBP20.18■□□□□ 0.82
SCAMP4-204ENST00000414057 P2RX7Q99572 595 aaKnown RBP20.18■□□□□ 0.82
SCAMP4-204ENST00000414057 KIAA1683Q9H0B3 1180 aa20.18■□□□□ 0.82
SCAMP4-204ENST00000414057 EMILIN3Q9NT22 766 aa20.18■□□□□ 0.82
SCAMP4-204ENST00000414057 USP17L15C9J2P7 530 aa20.18■□□□□ 0.82
SCAMP4-204ENST00000414057 USP17L13C9JLJ4 530 aa20.18■□□□□ 0.82
SCAMP4-204ENST00000414057 USP17L11C9JVI0 530 aa20.18■□□□□ 0.82
SCAMP4-204ENST00000414057 USP17L18D6R9N7 530 aa20.18■□□□□ 0.82
SCAMP4-204ENST00000414057 USP17L22D6RA61 530 aa20.18■□□□□ 0.82
SCAMP4-204ENST00000414057 USP17L17D6RBQ6 530 aa20.18■□□□□ 0.82
SCAMP4-204ENST00000414057 USP17L19D6RCP7 530 aa20.18■□□□□ 0.82
SCAMP4-204ENST00000414057 USP17L20D6RJB6 530 aa20.18■□□□□ 0.82
SCAMP4-204ENST00000414057 MBD4O95243 580 aa20.18■□□□□ 0.82
SCAMP4-204ENST00000414057 GJA8P48165 433 aa20.18■□□□□ 0.82
SCAMP4-204ENST00000414057 USP17L24Q0WX57 530 aa20.18■□□□□ 0.82
SCAMP4-204ENST00000414057 MPHOSPH10O00566 681 aaKnown RBP20.17■□□□□ 0.82
SCAMP4-204ENST00000414057 ANP32AP39687 249 aaKnown RBP20.17■□□□□ 0.82
SCAMP4-204ENST00000414057 PDE4DIPQ5VU43 2346 aa20.17■□□□□ 0.82
SCAMP4-204ENST00000414057 MGAMO43451 1857 aa20.16■□□□□ 0.82
SCAMP4-204ENST00000414057 KIAA0100Q14667 2235 aaKnown RBP20.16■□□□□ 0.82
SCAMP4-204ENST00000414057 REC8O95072 547 aa20.16■□□□□ 0.82
SCAMP4-204ENST00000414057 INHAP05111 366 aa20.16■□□□□ 0.82
SCAMP4-204ENST00000414057 ELNP15502 786 aa20.16■□□□□ 0.82
SCAMP4-204ENST00000414057 CHMLP26374 656 aa20.16■□□□□ 0.82
SCAMP4-204ENST00000414057 MAPK4P31152 587 aa20.16■□□□□ 0.82
SCAMP4-204ENST00000414057 MFAP1P55081 439 aaKnown RBP20.16■□□□□ 0.82
SCAMP4-204ENST00000414057 BRCA2P51587 3418 aa20.15■□□□□ 0.82
SCAMP4-204ENST00000414057 ZYXQ15942 572 aaKnown RBP20.15■□□□□ 0.82
SCAMP4-204ENST00000414057 SOCS4Q8WXH5 440 aa20.15■□□□□ 0.82
SCAMP4-204ENST00000414057 TBC1D32Q96NH3 1257 aa20.15■□□□□ 0.82
SCAMP4-204ENST00000414057 EPB41L2O43491 1005 aaKnown RBP20.14■□□□□ 0.81
SCAMP4-204ENST00000414057 ERVK-9P63128 1117 aa20.14■□□□□ 0.81
SCAMP4-204ENST00000414057 ERVK-24P63145 666 aa20.14■□□□□ 0.81
SCAMP4-204ENST00000414057 CCNA1P78396 465 aa20.14■□□□□ 0.81
SCAMP4-204ENST00000414057 LRRFIP1Q32MZ4 808 aaKnown RBP20.14■□□□□ 0.81
SCAMP4-204ENST00000414057 TMEM179Q6ZVK1 233 aa20.14■□□□□ 0.81
SCAMP4-204ENST00000414057 U2AF1L4Q8WU68 220 aaKnown RBP20.14■□□□□ 0.81
SCAMP4-204ENST00000414057 RUFY2Q8WXA3 655 aa20.14■□□□□ 0.81
SCAMP4-204ENST00000414057 NUDT12Q9BQG2 462 aa20.14■□□□□ 0.81
SCAMP4-204ENST00000414057 UNC93B1Q9H1C4 597 aa20.14■□□□□ 0.81
SCAMP4-204ENST00000414057 RBPJLQ9UBG7 517 aa20.14■□□□□ 0.81
SCAMP4-204ENST00000414057 RABGAP1Q9Y3P9 1069 aa20.14■□□□□ 0.81
SCAMP4-204ENST00000414057 SLC4A4Q9Y6R1 1079 aa20.14■□□□□ 0.81
SCAMP4-204ENST00000414057 PRKAB2O43741 272 aa20.13■□□□□ 0.81
SCAMP4-204ENST00000414057 SGPL1O95470 568 aa20.13■□□□□ 0.81
SCAMP4-204ENST00000414057 HMGCRP04035 888 aa20.13■□□□□ 0.81
SCAMP4-204ENST00000414057 VCAM1P19320 739 aa20.13■□□□□ 0.81
SCAMP4-204ENST00000414057 SEPT2Q15019 361 aa20.13■□□□□ 0.81
SCAMP4-204ENST00000414057 CATSPERGQ6ZRH7 1159 aa20.13■□□□□ 0.81
SCAMP4-204ENST00000414057 SHISA4Q96DD7 197 aa20.13■□□□□ 0.81
SCAMP4-204ENST00000414057 CCDC17Q96LX7 622 aa20.13■□□□□ 0.81
SCAMP4-204ENST00000414057 PAGR1Q9BTK6 254 aa20.13■□□□□ 0.81
SCAMP4-204ENST00000414057 CWC22Q9HCG8 908 aaKnown RBP20.13■□□□□ 0.81
SCAMP4-204ENST00000414057 GJD2Q9UKL4 321 aa20.13■□□□□ 0.81
SCAMP4-204ENST00000414057 TRMT44Q8IYL2 757 aaKnown RBP20.12■□□□□ 0.81
SCAMP4-204ENST00000414057 KBTBD3Q8NAB2 608 aa20.12■□□□□ 0.81
SCAMP4-204ENST00000414057 ACER1Q8TDN7 264 aa20.12■□□□□ 0.81
SCAMP4-204ENST00000414057 ESYT1Q9BSJ8 1104 aa20.12■□□□□ 0.81
SCAMP4-204ENST00000414057 C22orf23Q9BZE7 217 aa20.12■□□□□ 0.81
SCAMP4-204ENST00000414057 SH2D4AQ9H788 454 aa20.12■□□□□ 0.81
SCAMP4-204ENST00000414057 TXNRD2Q9NNW7 524 aa20.12■□□□□ 0.81
SCAMP4-204ENST00000414057 NAV1Q8NEY1 1877 aa20.12■□□□□ 0.81
SCAMP4-204ENST00000414057 USP17L12C9JPN9 530 aa20.11■□□□□ 0.81
SCAMP4-204ENST00000414057 USP17L21D6R901 530 aa20.11■□□□□ 0.81
SCAMP4-204ENST00000414057 SLC34A2O95436 690 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms