RNA–Protein interactions for RNA: ENST00000414017.5

HLA-DMB-257, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-257ENST00000414017 ZBTB48P10074 688 aaPredicted RBP12.33□□□□□ -0.44
HLA-DMB-257ENST00000414017 MCCP23508 829 aa12.33□□□□□ -0.44
HLA-DMB-257ENST00000414017 GUCY1A2P33402 732 aa12.33□□□□□ -0.44
HLA-DMB-257ENST00000414017 GTF2A2P52657 109 aa12.33□□□□□ -0.44
HLA-DMB-257ENST00000414017 SNAPC2Q13487 334 aa12.33□□□□□ -0.44
HLA-DMB-257ENST00000414017 DGKZQ13574 1117 aa12.33□□□□□ -0.44
HLA-DMB-257ENST00000414017 MTMR2Q13614 643 aa12.33□□□□□ -0.44
HLA-DMB-257ENST00000414017 CCL15Q16663 113 aa12.33□□□□□ -0.44
HLA-DMB-257ENST00000414017 C8orf34Q49A92 452 aa12.33□□□□□ -0.44
HLA-DMB-257ENST00000414017 ZNF280CQ8ND82 737 aa12.33□□□□□ -0.44
HLA-DMB-257ENST00000414017 ACER1Q8TDN7 264 aa12.33□□□□□ -0.44
HLA-DMB-257ENST00000414017 KRT23Q9C075 422 aa12.33□□□□□ -0.44
HLA-DMB-257ENST00000414017 CNNM2Q9H8M5 875 aa12.33□□□□□ -0.44
HLA-DMB-257ENST00000414017 GINM1Q9NU53 330 aa12.33□□□□□ -0.44
HLA-DMB-257ENST00000414017 TAOK2Q9UL54 1235 aa12.33□□□□□ -0.44
HLA-DMB-257ENST00000414017 MTMR7Q9Y216 660 aa12.33□□□□□ -0.44
HLA-DMB-257ENST00000414017 AFG3L2Q9Y4W6 797 aa12.33□□□□□ -0.44
HLA-DMB-257ENST00000414017 LAMA4Q16363 1823 aa12.32□□□□□ -0.44
HLA-DMB-257ENST00000414017 SEC24BO95487 1268 aa12.32□□□□□ -0.44
HLA-DMB-257ENST00000414017 EEF2P13639 858 aaKnown RBP12.32□□□□□ -0.44
HLA-DMB-257ENST00000414017 ZKSCAN1P17029 563 aaPredicted RBP12.32□□□□□ -0.44
HLA-DMB-257ENST00000414017 HMGCS2P54868 508 aa12.32□□□□□ -0.44
HLA-DMB-257ENST00000414017 NECTIN1Q15223 517 aa12.32□□□□□ -0.44
HLA-DMB-257ENST00000414017 STOX1Q6ZVD7 989 aa12.32□□□□□ -0.44
HLA-DMB-257ENST00000414017 CHST3Q7LGC8 479 aa12.32□□□□□ -0.44
HLA-DMB-257ENST00000414017 NEDD1Q8NHV4 660 aa12.32□□□□□ -0.44
HLA-DMB-257ENST00000414017 NCOA7Q8NI08 942 aa12.32□□□□□ -0.44
HLA-DMB-257ENST00000414017 NKX2-3Q8TAU0 364 aa12.32□□□□□ -0.44
HLA-DMB-257ENST00000414017 CEP95Q96GE4 821 aa12.32□□□□□ -0.44
HLA-DMB-257ENST00000414017 ARHGEF10LQ9HCE6 1279 aa12.32□□□□□ -0.44
HLA-DMB-257ENST00000414017 TMOD4Q9NZQ9 345 aa12.32□□□□□ -0.44
HLA-DMB-257ENST00000414017 CLIP2Q9UDT6 1046 aa12.32□□□□□ -0.44
HLA-DMB-257ENST00000414017 ISY1Q9ULR0 285 aaKnown RBP12.32□□□□□ -0.44
HLA-DMB-257ENST00000414017 STX8Q9UNK0 236 aa12.32□□□□□ -0.44
HLA-DMB-257ENST00000414017 MANSC4A6NHS7 340 aaPredicted RBP12.31□□□□□ -0.44
HLA-DMB-257ENST00000414017 USP17L10C9JJH3 530 aa12.31□□□□□ -0.44
HLA-DMB-257ENST00000414017 PCP11498 1178 aaKnown RBP12.31□□□□□ -0.44
HLA-DMB-257ENST00000414017 CETPP11597 493 aa12.31□□□□□ -0.44
HLA-DMB-257ENST00000414017 SREBF2Q12772 1141 aa12.31□□□□□ -0.44
HLA-DMB-257ENST00000414017 SAMD1Q6SPF0 538 aaPredicted RBP12.31□□□□□ -0.44
HLA-DMB-257ENST00000414017 RASEFQ8IZ41 740 aa12.31□□□□□ -0.44
HLA-DMB-257ENST00000414017 LRRC47Q8N1G4 583 aaKnown RBP12.31□□□□□ -0.44
HLA-DMB-257ENST00000414017 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.31□□□□□ -0.44
HLA-DMB-257ENST00000414017 USP26Q9BXU7 913 aa12.31□□□□□ -0.44
HLA-DMB-257ENST00000414017 TBC1D2Q9BYX2 928 aa12.31□□□□□ -0.44
HLA-DMB-257ENST00000414017 KANSL2Q9H9L4 492 aa12.31□□□□□ -0.44
HLA-DMB-257ENST00000414017 CXCL11O14625 94 aa12.3□□□□□ -0.44
HLA-DMB-257ENST00000414017 EIF5BO60841 1220 aaKnown RBP12.3□□□□□ -0.44
HLA-DMB-257ENST00000414017 TTLL1O95922 423 aa12.3□□□□□ -0.44
HLA-DMB-257ENST00000414017 FGRP09769 529 aa12.3□□□□□ -0.44
HLA-DMB-257ENST00000414017 HSPA4P34932 840 aa12.3□□□□□ -0.44
HLA-DMB-257ENST00000414017 BACE1P56817 501 aa12.3□□□□□ -0.44
HLA-DMB-257ENST00000414017 CYB5R4Q7L1T6 521 aa12.3□□□□□ -0.44
HLA-DMB-257ENST00000414017 IQCA1Q86XH1 822 aa12.3□□□□□ -0.44
HLA-DMB-257ENST00000414017 SPICE1Q8N0Z3 855 aa12.3□□□□□ -0.44
HLA-DMB-257ENST00000414017 DNAJC5GQ8N7S2 189 aa12.3□□□□□ -0.44
HLA-DMB-257ENST00000414017 BRI3BPQ8WY22 251 aa12.3□□□□□ -0.44
HLA-DMB-257ENST00000414017 JAKMIP1Q96N16 626 aaKnown RBP12.3□□□□□ -0.44
HLA-DMB-257ENST00000414017 UBAC1Q9BSL1 405 aa12.3□□□□□ -0.44
HLA-DMB-257ENST00000414017 WDR18Q9BV38 432 aa12.3□□□□□ -0.44
HLA-DMB-257ENST00000414017 SH2D4AQ9H788 454 aa12.3□□□□□ -0.44
HLA-DMB-257ENST00000414017 MTMR4Q9NYA4 1195 aa12.3□□□□□ -0.44
HLA-DMB-257ENST00000414017 ZSWIM5Q9P217 1185 aa12.3□□□□□ -0.44
HLA-DMB-257ENST00000414017 KCNH4Q9UQ05 1017 aa12.3□□□□□ -0.44
HLA-DMB-257ENST00000414017 CEP350Q5VT06 3117 aa12.3□□□□□ -0.44
HLA-DMB-257ENST00000414017 A0A0G2JLL6 359 aaPredicted RBP12.29□□□□□ -0.44
HLA-DMB-257ENST00000414017 A0A1W2PRG0 241 aa12.29□□□□□ -0.44
HLA-DMB-257ENST00000414017 ERICH2A1L162 156 aa12.29□□□□□ -0.44
HLA-DMB-257ENST00000414017 IFIT3O14879 490 aaKnown RBP12.29□□□□□ -0.44
HLA-DMB-257ENST00000414017 MAP2K2P36507 400 aa12.29□□□□□ -0.44
HLA-DMB-257ENST00000414017 USP14P54578 494 aa12.29□□□□□ -0.44
HLA-DMB-257ENST00000414017 KRT32Q14532 448 aa12.29□□□□□ -0.44
HLA-DMB-257ENST00000414017 USP17L2Q6R6M4 530 aa12.29□□□□□ -0.44
HLA-DMB-257ENST00000414017 PRRT2Q7Z6L0 340 aaPredicted RBP12.29□□□□□ -0.44
HLA-DMB-257ENST00000414017 MS4A4AQ96JQ5 239 aa12.29□□□□□ -0.44
HLA-DMB-257ENST00000414017 NEK1Q96PY6 1258 aa12.29□□□□□ -0.44
HLA-DMB-257ENST00000414017 BEGAINQ9BUH8 593 aa12.29□□□□□ -0.44
HLA-DMB-257ENST00000414017 IL17RBQ9NRM6 502 aa12.29□□□□□ -0.44
HLA-DMB-257ENST00000414017 SNX14Q9Y5W7 946 aa12.29□□□□□ -0.44
HLA-DMB-257ENST00000414017 IGKV6D-41A0A0C4DH26 115 aa12.28□□□□□ -0.44
HLA-DMB-257ENST00000414017 C19orf81C9J6K1 198 aa12.28□□□□□ -0.44
HLA-DMB-257ENST00000414017 BTBD19C9JJ37 291 aa12.28□□□□□ -0.44
HLA-DMB-257ENST00000414017 IGF2BP3O00425 579 aaKnown RBP eCLIP12.28□□□□□ -0.44
HLA-DMB-257ENST00000414017 PRC1O43663 620 aa12.28□□□□□ -0.44
HLA-DMB-257ENST00000414017 CPA1P15085 419 aa12.28□□□□□ -0.44
HLA-DMB-257ENST00000414017 ADCK5Q3MIX3 580 aa12.28□□□□□ -0.44
HLA-DMB-257ENST00000414017 TREML2Q5T2D2 321 aa12.28□□□□□ -0.44
HLA-DMB-257ENST00000414017 OTUD7BQ6GQQ9 843 aa12.28□□□□□ -0.44
HLA-DMB-257ENST00000414017 FASTKD5Q7L8L6 764 aaKnown RBP12.28□□□□□ -0.44
HLA-DMB-257ENST00000414017 SIAH1Q8IUQ4 282 aa12.28□□□□□ -0.44
HLA-DMB-257ENST00000414017 TCEANC2Q96MN5 208 aa12.28□□□□□ -0.44
HLA-DMB-257ENST00000414017 ZSCAN10Q96SZ4 725 aaPredicted RBP12.28□□□□□ -0.44
HLA-DMB-257ENST00000414017 LRRC2Q9BYS8 371 aa12.28□□□□□ -0.44
HLA-DMB-257ENST00000414017 UPF2Q9HAU5 1272 aaKnown RBP12.28□□□□□ -0.44
HLA-DMB-257ENST00000414017 GOPCQ9HD26 462 aa12.28□□□□□ -0.44
HLA-DMB-257ENST00000414017 EMILIN3Q9NT22 766 aa12.28□□□□□ -0.44
HLA-DMB-257ENST00000414017 NYAP2Q9P242 653 aa12.28□□□□□ -0.44
HLA-DMB-257ENST00000414017 TNKSO95271 1327 aa12.28□□□□□ -0.44
HLA-DMB-257ENST00000414017 PLIN4Q96Q06 1357 aa12.28□□□□□ -0.44
HLA-DMB-257ENST00000414017 PHIPQ8WWQ0 1821 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms