RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 RAG1P15918 1043 aa6.1□□□□□ -1.43
HMGB1P11-201ENST00000413899 DNAJA1P31689 397 aaKnown RBP6.1□□□□□ -1.43
HMGB1P11-201ENST00000413899 CPLX3Q8WVH0 158 aa6.1□□□□□ -1.43
HMGB1P11-201ENST00000413899 OSBPL1AQ9BXW6 950 aa6.1□□□□□ -1.43
HMGB1P11-201ENST00000413899 MKNK2Q9HBH9 465 aa6.1□□□□□ -1.43
HMGB1P11-201ENST00000413899 GTF2IRD1Q9UHL9 959 aa6.1□□□□□ -1.43
HMGB1P11-201ENST00000413899 MAPK8IP1Q9UQF2 711 aa6.1□□□□□ -1.43
HMGB1P11-201ENST00000413899 COL17A1Q9UMD9 1497 aaPredicted RBP6.09□□□□□ -1.43
HMGB1P11-201ENST00000413899 ADAM23O75077 832 aa6.09□□□□□ -1.43
HMGB1P11-201ENST00000413899 UBOX5O94941 541 aa6.09□□□□□ -1.43
HMGB1P11-201ENST00000413899 SSBP05455 408 aaKnown RBP eCLIP6.09□□□□□ -1.43
HMGB1P11-201ENST00000413899 GUCY2CP25092 1073 aa6.09□□□□□ -1.43
HMGB1P11-201ENST00000413899 ETV3P41162 512 aa6.09□□□□□ -1.43
HMGB1P11-201ENST00000413899 CASP7P55210 303 aa6.09□□□□□ -1.43
HMGB1P11-201ENST00000413899 FBXW10Q5XX13 1052 aa6.09□□□□□ -1.43
HMGB1P11-201ENST00000413899 PHACTR4Q8IZ21 702 aa6.09□□□□□ -1.43
HMGB1P11-201ENST00000413899 RIN3Q8TB24 985 aa6.09□□□□□ -1.43
HMGB1P11-201ENST00000413899 XAGE3Q8WTP9 111 aa6.09□□□□□ -1.43
HMGB1P11-201ENST00000413899 ARMC5Q96C12 935 aa6.09□□□□□ -1.43
HMGB1P11-201ENST00000413899 HEXIM2Q96MH2 286 aaKnown RBP6.09□□□□□ -1.43
HMGB1P11-201ENST00000413899 KIF2CQ99661 725 aa6.09□□□□□ -1.43
HMGB1P11-201ENST00000413899 PIM2Q9P1W9 311 aa6.09□□□□□ -1.43
HMGB1P11-201ENST00000413899 LEMD3Q9Y2U8 911 aa6.09□□□□□ -1.43
HMGB1P11-201ENST00000413899 ACRP10323 421 aa6.08□□□□□ -1.44
HMGB1P11-201ENST00000413899 RANGAP1P46060 587 aaPredicted RBP6.08□□□□□ -1.44
HMGB1P11-201ENST00000413899 SF3A1Q15459 793 aaKnown RBP6.08□□□□□ -1.44
HMGB1P11-201ENST00000413899 BAHD1Q8TBE0 780 aaPredicted RBP6.08□□□□□ -1.44
HMGB1P11-201ENST00000413899 SLC9A7Q96T83 725 aa6.08□□□□□ -1.44
HMGB1P11-201ENST00000413899 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.08□□□□□ -1.44
HMGB1P11-201ENST00000413899 PRDM5Q9NQX1 630 aaPredicted RBP6.08□□□□□ -1.44
HMGB1P11-201ENST00000413899 RNF112Q9ULX5 631 aa6.08□□□□□ -1.44
HMGB1P11-201ENST00000413899 ZNF865P0CJ78 1059 aaPredicted RBP6.07□□□□□ -1.44
HMGB1P11-201ENST00000413899 FOSL1P15407 271 aa6.07□□□□□ -1.44
HMGB1P11-201ENST00000413899 CYP7A1P22680 504 aa6.07□□□□□ -1.44
HMGB1P11-201ENST00000413899 CDH24Q86UP0 819 aa6.07□□□□□ -1.44
HMGB1P11-201ENST00000413899 FAM169BQ8N8A8 192 aa6.07□□□□□ -1.44
HMGB1P11-201ENST00000413899 RNF141Q8WVD5 230 aa6.07□□□□□ -1.44
HMGB1P11-201ENST00000413899 SREK1Q8WXA9 508 aaKnown RBP6.07□□□□□ -1.44
HMGB1P11-201ENST00000413899 VWCEQ96DN2 955 aa6.07□□□□□ -1.44
HMGB1P11-201ENST00000413899 TANGO6Q9C0B7 1094 aa6.07□□□□□ -1.44
HMGB1P11-201ENST00000413899 PRKAG3Q9UGI9 489 aa6.07□□□□□ -1.44
HMGB1P11-201ENST00000413899 CNTNAP4Q9C0A0 1308 aa6.06□□□□□ -1.44
HMGB1P11-201ENST00000413899 TGFB1P01137 390 aa6.06□□□□□ -1.44
HMGB1P11-201ENST00000413899 POLR2BP30876 1174 aaKnown RBP6.06□□□□□ -1.44
HMGB1P11-201ENST00000413899 GBP1P32455 592 aa6.06□□□□□ -1.44
HMGB1P11-201ENST00000413899 KIR3DL1P43629 444 aa6.06□□□□□ -1.44
HMGB1P11-201ENST00000413899 OXCT1P55809 520 aa6.06□□□□□ -1.44
HMGB1P11-201ENST00000413899 TNNI3KQ59H18 835 aa6.06□□□□□ -1.44
HMGB1P11-201ENST00000413899 SFRP5Q5T4F7 317 aa6.06□□□□□ -1.44
HMGB1P11-201ENST00000413899 INTS5Q6P9B9 1019 aaKnown RBP6.06□□□□□ -1.44
HMGB1P11-201ENST00000413899 RUFY4Q6ZNE9 571 aa6.06□□□□□ -1.44
HMGB1P11-201ENST00000413899 ANAPC16Q96DE5 110 aa6.06□□□□□ -1.44
HMGB1P11-201ENST00000413899 FBXL18Q96ME1 805 aa6.06□□□□□ -1.44
HMGB1P11-201ENST00000413899 KREMEN1Q96MU8 473 aa6.06□□□□□ -1.44
HMGB1P11-201ENST00000413899 ASPNQ9BXN1 380 aa6.06□□□□□ -1.44
HMGB1P11-201ENST00000413899 TPX2Q9ULW0 747 aaKnown RBP6.06□□□□□ -1.44
HMGB1P11-201ENST00000413899 SLC12A7Q9Y666 1083 aa6.06□□□□□ -1.44
HMGB1P11-201ENST00000413899 A0A1W2PQH9 124 aa6.05□□□□□ -1.44
HMGB1P11-201ENST00000413899 CYP26A1O43174 497 aa6.05□□□□□ -1.44
HMGB1P11-201ENST00000413899 ATP2B1P20020 1258 aa6.05□□□□□ -1.44
HMGB1P11-201ENST00000413899 ETFBP38117 255 aa6.05□□□□□ -1.44
HMGB1P11-201ENST00000413899 RNF4P78317 190 aa6.05□□□□□ -1.44
HMGB1P11-201ENST00000413899 UNC5AQ6ZN44 842 aa6.05□□□□□ -1.44
HMGB1P11-201ENST00000413899 TTC6Q86TZ1 520 aa6.05□□□□□ -1.44
HMGB1P11-201ENST00000413899 TMEM192Q8IY95 271 aa6.05□□□□□ -1.44
HMGB1P11-201ENST00000413899 DHRS1Q96LJ7 313 aa6.05□□□□□ -1.44
HMGB1P11-201ENST00000413899 TNKS2Q9H2K2 1166 aa6.05□□□□□ -1.44
HMGB1P11-201ENST00000413899 ZNF408Q9H9D4 720 aa6.05□□□□□ -1.44
HMGB1P11-201ENST00000413899 U3KQE9 123 aa6.05□□□□□ -1.44
HMGB1P11-201ENST00000413899 COBLO75128 1261 aa6.04□□□□□ -1.44
HMGB1P11-201ENST00000413899 CLEC3AO75596 197 aa6.04□□□□□ -1.44
HMGB1P11-201ENST00000413899 GRIK1P39086 918 aa6.04□□□□□ -1.44
HMGB1P11-201ENST00000413899 PMS1P54277 932 aaKnown RBP6.04□□□□□ -1.44
HMGB1P11-201ENST00000413899 ZYXQ15942 572 aaKnown RBP6.04□□□□□ -1.44
HMGB1P11-201ENST00000413899 MSMPQ1L6U9 139 aa6.04□□□□□ -1.44
HMGB1P11-201ENST00000413899 NBPF12Q5TAG4 269 aaPredicted RBP6.04□□□□□ -1.44
HMGB1P11-201ENST00000413899 PIWIL2Q8TC59 973 aaKnown RBP6.04□□□□□ -1.44
HMGB1P11-201ENST00000413899 SUCOQ9UBS9 1254 aaKnown RBP6.04□□□□□ -1.44
HMGB1P11-201ENST00000413899 ZNF214Q9UL59 606 aaPredicted RBP6.04□□□□□ -1.44
HMGB1P11-201ENST00000413899 MRVI1Q9Y6F6 885 aa6.04□□□□□ -1.44
HMGB1P11-201ENST00000413899 CAPN6Q9Y6Q1 641 aa6.04□□□□□ -1.44
HMGB1P11-201ENST00000413899 GNAT3A8MTJ3 354 aa6.03□□□□□ -1.44
HMGB1P11-201ENST00000413899 SMAD7O15105 426 aaKnown RBP6.03□□□□□ -1.44
HMGB1P11-201ENST00000413899 CEACAM5P06731 702 aa6.03□□□□□ -1.44
HMGB1P11-201ENST00000413899 HOXA10P31260 410 aaPredicted RBP6.03□□□□□ -1.44
HMGB1P11-201ENST00000413899 MFSD4AQ8N468 514 aa6.03□□□□□ -1.44
HMGB1P11-201ENST00000413899 FAM181AQ8N9Y4 354 aa6.03□□□□□ -1.44
HMGB1P11-201ENST00000413899 SLC6A18Q96N87 628 aa6.03□□□□□ -1.44
HMGB1P11-201ENST00000413899 PHAXQ9H814 394 aaKnown RBP6.03□□□□□ -1.44
HMGB1P11-201ENST00000413899 LRRC4CQ9HCJ2 640 aa6.03□□□□□ -1.44
HMGB1P11-201ENST00000413899 ZC3H7BQ9UGR2 993 aaKnown RBP6.03□□□□□ -1.44
HMGB1P11-201ENST00000413899 PLAGL2Q9UPG8 496 aa6.03□□□□□ -1.44
HMGB1P11-201ENST00000413899 LTBP3Q9NS15 1303 aa6.02□□□□□ -1.45
HMGB1P11-201ENST00000413899 KIAA1324LA8MWY0 1029 aaPredicted RBP6.02□□□□□ -1.45
HMGB1P11-201ENST00000413899 PRR33A8MZF0 331 aa6.02□□□□□ -1.45
HMGB1P11-201ENST00000413899 CD97P48960 835 aa6.02□□□□□ -1.45
HMGB1P11-201ENST00000413899 CLCN7P51798 805 aa6.02□□□□□ -1.45
HMGB1P11-201ENST00000413899 RBL2Q08999 1139 aa6.02□□□□□ -1.45
HMGB1P11-201ENST00000413899 NKPD1Q17RQ9 610 aa6.02□□□□□ -1.45
HMGB1P11-201ENST00000413899 BBS9Q3SYG4 887 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms