RNA–Protein interactions for RNA: ENST00000413517.1

HERPUD2-203, Transcript of HERPUD family member 2, humanhuman

TSL 5

Gene HERPUD2, Length 808 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-203ENST00000413517 GRXCR2A6NFK2 248 aa10.32□□□□□ -0.76
HERPUD2-203ENST00000413517 TLR2O60603 784 aa10.32□□□□□ -0.76
HERPUD2-203ENST00000413517 IGHDP01880 384 aa10.32□□□□□ -0.76
HERPUD2-203ENST00000413517 CYP2C8P10632 490 aa10.32□□□□□ -0.76
HERPUD2-203ENST00000413517 SHMT1P34896 483 aa10.32□□□□□ -0.76
HERPUD2-203ENST00000413517 SP3Q02447 781 aa10.32□□□□□ -0.76
HERPUD2-203ENST00000413517 GABPAQ06546 454 aa10.32□□□□□ -0.76
HERPUD2-203ENST00000413517 SPP2Q13103 211 aa10.32□□□□□ -0.76
HERPUD2-203ENST00000413517 DSG2Q14126 1118 aa10.32□□□□□ -0.76
HERPUD2-203ENST00000413517 UBE3CQ15386 1083 aa10.32□□□□□ -0.76
HERPUD2-203ENST00000413517 TREML2Q5T2D2 321 aa10.32□□□□□ -0.76
HERPUD2-203ENST00000413517 CERS3Q8IU89 383 aa10.32□□□□□ -0.76
HERPUD2-203ENST00000413517 FOXP4Q8IVH2 680 aaPredicted RBP10.32□□□□□ -0.76
HERPUD2-203ENST00000413517 KBTBD3Q8NAB2 608 aa10.32□□□□□ -0.76
HERPUD2-203ENST00000413517 CRNKL1Q9BZJ0 848 aaKnown RBP10.32□□□□□ -0.76
HERPUD2-203ENST00000413517 ZFYVE28Q9HCC9 887 aa10.32□□□□□ -0.76
HERPUD2-203ENST00000413517 DCP1AQ9NPI6 582 aaPredicted RBP10.32□□□□□ -0.76
HERPUD2-203ENST00000413517 ZBTB21Q9ULJ3 1066 aa10.32□□□□□ -0.76
HERPUD2-203ENST00000413517 PLXNB2O15031 1838 aa10.32□□□□□ -0.76
HERPUD2-203ENST00000413517 MYH4Q9Y623 1939 aa10.31□□□□□ -0.76
HERPUD2-203ENST00000413517 CYP2D7A0A087X1C5 515 aa10.31□□□□□ -0.76
HERPUD2-203ENST00000413517 CCDC85CA6NKD9 419 aa10.31□□□□□ -0.76
HERPUD2-203ENST00000413517 GUCY1A2P33402 732 aa10.31□□□□□ -0.76
HERPUD2-203ENST00000413517 IRX6P78412 446 aaPredicted RBP10.31□□□□□ -0.76
HERPUD2-203ENST00000413517 ANKRD45Q5TZF3 282 aa10.31□□□□□ -0.76
HERPUD2-203ENST00000413517 TATDN1Q6P1N9 297 aa10.31□□□□□ -0.76
HERPUD2-203ENST00000413517 C17orf99Q6UX52 265 aa10.31□□□□□ -0.76
HERPUD2-203ENST00000413517 GADL1Q6ZQY3 521 aa10.31□□□□□ -0.76
HERPUD2-203ENST00000413517 SMC5Q8IY18 1101 aa10.31□□□□□ -0.76
HERPUD2-203ENST00000413517 CRACR2BQ8N4Y2 399 aaPredicted RBP10.31□□□□□ -0.76
HERPUD2-203ENST00000413517 SLC44A5Q8NCS7 719 aa10.31□□□□□ -0.76
HERPUD2-203ENST00000413517 OSBP2Q969R2 916 aa10.31□□□□□ -0.76
HERPUD2-203ENST00000413517 EHD4Q9H223 541 aa10.31□□□□□ -0.76
HERPUD2-203ENST00000413517 MCM9Q9NXL9 1143 aa10.31□□□□□ -0.76
HERPUD2-203ENST00000413517 CPA4Q9UI42 421 aa10.31□□□□□ -0.76
HERPUD2-203ENST00000413517 SERPINB13Q9UIV8 391 aa10.31□□□□□ -0.76
HERPUD2-203ENST00000413517 HPS5Q9UPZ3 1129 aa10.31□□□□□ -0.76
HERPUD2-203ENST00000413517 TRIM17Q9Y577 477 aa10.31□□□□□ -0.76
HERPUD2-203ENST00000413517 TTC41PQ6P2S7 1318 aa10.31□□□□□ -0.76
HERPUD2-203ENST00000413517 USP17L5A8MUK1 530 aa10.3□□□□□ -0.76
HERPUD2-203ENST00000413517 GH2P01242 217 aa10.3□□□□□ -0.76
HERPUD2-203ENST00000413517 HLA-DOAP06340 250 aa10.3□□□□□ -0.76
HERPUD2-203ENST00000413517 BCRP11274 1271 aa10.3□□□□□ -0.76
HERPUD2-203ENST00000413517 MX1P20591 662 aa10.3□□□□□ -0.76
HERPUD2-203ENST00000413517 HMGCS2P54868 508 aa10.3□□□□□ -0.76
HERPUD2-203ENST00000413517 SH3D19Q5HYK7 790 aa10.3□□□□□ -0.76
HERPUD2-203ENST00000413517 FBXO46Q6PJ61 603 aaPredicted RBP10.3□□□□□ -0.76
HERPUD2-203ENST00000413517 ZNF280CQ8ND82 737 aa10.3□□□□□ -0.76
HERPUD2-203ENST00000413517 DYNLL2Q96FJ2 89 aa10.3□□□□□ -0.76
HERPUD2-203ENST00000413517 ERO1AQ96HE7 468 aa10.3□□□□□ -0.76
HERPUD2-203ENST00000413517 GPATCH3Q96I76 525 aa10.3□□□□□ -0.76
HERPUD2-203ENST00000413517 WDR18Q9BV38 432 aa10.3□□□□□ -0.76
HERPUD2-203ENST00000413517 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.3□□□□□ -0.76
HERPUD2-203ENST00000413517 COL11A1P12107 1806 aaPredicted RBP10.29□□□□□ -0.76
HERPUD2-203ENST00000413517 M0R2C6 588 aa10.29□□□□□ -0.76
HERPUD2-203ENST00000413517 ASNSP08243 561 aa10.29□□□□□ -0.76
HERPUD2-203ENST00000413517 PRKAR2AP13861 404 aaKnown RBP10.29□□□□□ -0.76
HERPUD2-203ENST00000413517 PDE1AP54750 535 aa10.29□□□□□ -0.76
HERPUD2-203ENST00000413517 LACTBP83111 547 aaPredicted RBP10.29□□□□□ -0.76
HERPUD2-203ENST00000413517 MTMR2Q13614 643 aa10.29□□□□□ -0.76
HERPUD2-203ENST00000413517 TTC6Q86TZ1 520 aa10.29□□□□□ -0.76
HERPUD2-203ENST00000413517 GCC1Q96CN9 775 aa10.29□□□□□ -0.76
HERPUD2-203ENST00000413517 STRBPQ96SI9 672 aaKnown RBP10.29□□□□□ -0.76
HERPUD2-203ENST00000413517 SEC62Q99442 399 aaKnown RBP10.29□□□□□ -0.76
HERPUD2-203ENST00000413517 EPB41L4AQ9HCS5 686 aaPredicted RBP10.29□□□□□ -0.76
HERPUD2-203ENST00000413517 STAP2Q9UGK3 403 aa10.29□□□□□ -0.76
HERPUD2-203ENST00000413517 AGTPBP1Q9UPW5 1226 aa10.29□□□□□ -0.76
HERPUD2-203ENST00000413517 A0A0G2JMZ2 1700 aa10.28□□□□□ -0.76
HERPUD2-203ENST00000413517 GSG1L2A8MUP6 293 aa10.28□□□□□ -0.76
HERPUD2-203ENST00000413517 RNF113AO15541 343 aaKnown RBP10.28□□□□□ -0.76
HERPUD2-203ENST00000413517 GLRX3O76003 335 aaKnown RBP10.28□□□□□ -0.76
HERPUD2-203ENST00000413517 POLR3DP05423 398 aaPredicted RBP10.28□□□□□ -0.76
HERPUD2-203ENST00000413517 SOX10P56693 466 aa10.28□□□□□ -0.76
HERPUD2-203ENST00000413517 AAMPQ13685 434 aa10.28□□□□□ -0.76
HERPUD2-203ENST00000413517 PKN2Q16513 984 aaKnown RBP10.28□□□□□ -0.76
HERPUD2-203ENST00000413517 C12orf60Q5U649 245 aa10.28□□□□□ -0.76
HERPUD2-203ENST00000413517 POTEEQ6S8J3 1075 aa10.28□□□□□ -0.76
HERPUD2-203ENST00000413517 FASTKD5Q7L8L6 764 aaKnown RBP10.28□□□□□ -0.76
HERPUD2-203ENST00000413517 CLEC10AQ8IUN9 316 aa10.28□□□□□ -0.76
HERPUD2-203ENST00000413517 PROCA1Q8NCQ7 364 aaPredicted RBP10.28□□□□□ -0.76
HERPUD2-203ENST00000413517 ACER1Q8TDN7 264 aa10.28□□□□□ -0.76
HERPUD2-203ENST00000413517 APPBP2Q92624 585 aa10.28□□□□□ -0.76
HERPUD2-203ENST00000413517 TRIM47Q96LD4 638 aa10.28□□□□□ -0.76
HERPUD2-203ENST00000413517 PARK7Q99497 189 aaKnown RBP10.28□□□□□ -0.76
HERPUD2-203ENST00000413517 TMEM106CQ9BVX2 250 aa10.28□□□□□ -0.76
HERPUD2-203ENST00000413517 TRIM34Q9BYJ4 488 aa10.28□□□□□ -0.76
HERPUD2-203ENST00000413517 LNPKQ9C0E8 428 aa10.28□□□□□ -0.76
HERPUD2-203ENST00000413517 EFCC1Q9HA90 598 aa10.28□□□□□ -0.76
HERPUD2-203ENST00000413517 ATP8A2Q9NTI2 1148 aa10.28□□□□□ -0.76
HERPUD2-203ENST00000413517 PTPN22Q9Y2R2 807 aa10.28□□□□□ -0.76
HERPUD2-203ENST00000413517 SLC4A4Q9Y6R1 1079 aa10.28□□□□□ -0.76
HERPUD2-203ENST00000413517 USP17L12C9JPN9 530 aa10.27□□□□□ -0.77
HERPUD2-203ENST00000413517 USP17L21D6R901 530 aa10.27□□□□□ -0.77
HERPUD2-203ENST00000413517 ERC2O15083 957 aa10.27□□□□□ -0.77
HERPUD2-203ENST00000413517 FOXP2O15409 715 aa10.27□□□□□ -0.77
HERPUD2-203ENST00000413517 GPAA1O43292 621 aa10.27□□□□□ -0.77
HERPUD2-203ENST00000413517 RAD21O60216 631 aa10.27□□□□□ -0.77
HERPUD2-203ENST00000413517 PEX10O60683 326 aa10.27□□□□□ -0.77
HERPUD2-203ENST00000413517 FECHP22830 423 aa10.27□□□□□ -0.77
HERPUD2-203ENST00000413517 BACE1P56817 501 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms