RNA–Protein interactions for RNA: ENST00000412056.5

CPNE1-206, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 998 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-206ENST00000412056 PLIN4Q96Q06 1357 aa16.55■□□□□ 0.24
CPNE1-206ENST00000412056 NEDD4P46934 1319 aa16.55■□□□□ 0.24
CPNE1-206ENST00000412056 PARP14Q460N5 1801 aa16.55■□□□□ 0.24
CPNE1-206ENST00000412056 USP17L10C9JJH3 530 aa16.55■□□□□ 0.24
CPNE1-206ENST00000412056 ZNF213O14771 459 aa16.55■□□□□ 0.24
CPNE1-206ENST00000412056 ORC4O43929 436 aa16.55■□□□□ 0.24
CPNE1-206ENST00000412056 TRPA1O75762 1119 aa16.55■□□□□ 0.24
CPNE1-206ENST00000412056 FGRP09769 529 aa16.55■□□□□ 0.24
CPNE1-206ENST00000412056 ICA1Q05084 483 aa16.55■□□□□ 0.24
CPNE1-206ENST00000412056 ZYXQ15942 572 aaKnown RBP16.55■□□□□ 0.24
CPNE1-206ENST00000412056 SH3D19Q5HYK7 790 aa16.55■□□□□ 0.24
CPNE1-206ENST00000412056 FAM47AQ5JRC9 791 aa16.55■□□□□ 0.24
CPNE1-206ENST00000412056 AKNAD1Q5T1N1 836 aa16.55■□□□□ 0.24
CPNE1-206ENST00000412056 KIAA1211Q6ZU35 1233 aa16.55■□□□□ 0.24
CPNE1-206ENST00000412056 ZNF444Q8N0Y2 327 aaPredicted RBP16.55■□□□□ 0.24
CPNE1-206ENST00000412056 MAP4K1Q92918 833 aa16.55■□□□□ 0.24
CPNE1-206ENST00000412056 FEZ1Q99689 392 aa16.55■□□□□ 0.24
CPNE1-206ENST00000412056 ANO2Q9NQ90 1003 aa16.55■□□□□ 0.24
CPNE1-206ENST00000412056 TOMM22Q9NS69 142 aa16.55■□□□□ 0.24
CPNE1-206ENST00000412056 GTF3C3Q9Y5Q9 886 aa16.55■□□□□ 0.24
CPNE1-206ENST00000412056 A0A1W2PRG0 241 aa16.54■□□□□ 0.24
CPNE1-206ENST00000412056 BACE1P56817 501 aa16.54■□□□□ 0.24
CPNE1-206ENST00000412056 IMMTQ16891 758 aaKnown RBP16.54■□□□□ 0.24
CPNE1-206ENST00000412056 RRP12Q5JTH9 1297 aaKnown RBP16.54■□□□□ 0.24
CPNE1-206ENST00000412056 GPAT2Q6NUI2 795 aa16.54■□□□□ 0.24
CPNE1-206ENST00000412056 NKX2-3Q8TAU0 364 aa16.54■□□□□ 0.24
CPNE1-206ENST00000412056 SAGE1Q9NXZ1 904 aa16.54■□□□□ 0.24
CPNE1-206ENST00000412056 RBM8AQ9Y5S9 174 aaKnown RBP16.54■□□□□ 0.24
CPNE1-206ENST00000412056 U3KPZ7 1027 aaPredicted RBP16.54■□□□□ 0.24
CPNE1-206ENST00000412056 CEP350Q5VT06 3117 aa16.54■□□□□ 0.24
CPNE1-206ENST00000412056 IGKV6D-41A0A0C4DH26 115 aa16.53■□□□□ 0.24
CPNE1-206ENST00000412056 C19orf81C9J6K1 198 aa16.53■□□□□ 0.24
CPNE1-206ENST00000412056 CA12O43570 354 aa16.53■□□□□ 0.24
CPNE1-206ENST00000412056 TSPY3P0CV98 308 aa16.53■□□□□ 0.24
CPNE1-206ENST00000412056 TSPY8P0CW00 308 aa16.53■□□□□ 0.24
CPNE1-206ENST00000412056 TFAP4Q01664 338 aa16.53■□□□□ 0.24
CPNE1-206ENST00000412056 TREML2Q5T2D2 321 aa16.53■□□□□ 0.24
CPNE1-206ENST00000412056 OTUD7BQ6GQQ9 843 aa16.53■□□□□ 0.24
CPNE1-206ENST00000412056 MFSD6Q6ZSS7 791 aa16.53■□□□□ 0.24
CPNE1-206ENST00000412056 FASTKD5Q7L8L6 764 aaKnown RBP16.53■□□□□ 0.24
CPNE1-206ENST00000412056 ANKRD23Q86SG2 305 aa16.53■□□□□ 0.24
CPNE1-206ENST00000412056 SIAH1Q8IUQ4 282 aa16.53■□□□□ 0.24
CPNE1-206ENST00000412056 NEDD1Q8NHV4 660 aa16.53■□□□□ 0.24
CPNE1-206ENST00000412056 KANSL2Q9H9L4 492 aa16.53■□□□□ 0.24
CPNE1-206ENST00000412056 EMILIN3Q9NT22 766 aa16.53■□□□□ 0.24
CPNE1-206ENST00000412056 TSPY2A6NKD2 308 aa16.52■□□□□ 0.24
CPNE1-206ENST00000412056 PDHXO00330 501 aa16.52■□□□□ 0.24
CPNE1-206ENST00000412056 RANBP6O60518 1105 aaKnown RBP16.52■□□□□ 0.24
CPNE1-206ENST00000412056 TBC1D8O95759 1140 aa16.52■□□□□ 0.24
CPNE1-206ENST00000412056 ALDH1A1P00352 501 aa16.52■□□□□ 0.24
CPNE1-206ENST00000412056 CYP21A2P08686 494 aa16.52■□□□□ 0.24
CPNE1-206ENST00000412056 HSPA8P11142 646 aaKnown RBP16.52■□□□□ 0.24
CPNE1-206ENST00000412056 EEF2P13639 858 aaKnown RBP16.52■□□□□ 0.24
CPNE1-206ENST00000412056 ATP2B2Q01814 1243 aa16.52■□□□□ 0.24
CPNE1-206ENST00000412056 TAF1CQ15572 869 aaPredicted RBP16.52■□□□□ 0.24
CPNE1-206ENST00000412056 USP17L2Q6R6M4 530 aa16.52■□□□□ 0.24
CPNE1-206ENST00000412056 PROCA1Q8NCQ7 364 aaPredicted RBP16.52■□□□□ 0.24
CPNE1-206ENST00000412056 KIAA1683Q9H0B3 1180 aa16.52■□□□□ 0.24
CPNE1-206ENST00000412056 R3HDMLQ9H3Y0 253 aa16.52■□□□□ 0.24
CPNE1-206ENST00000412056 RNF41Q9H4P4 317 aaPredicted RBP16.52■□□□□ 0.24
CPNE1-206ENST00000412056 ARHGEF10LQ9HCE6 1279 aa16.52■□□□□ 0.24
CPNE1-206ENST00000412056 TMOD4Q9NZQ9 345 aa16.52■□□□□ 0.24
CPNE1-206ENST00000412056 AGTPBP1Q9UPW5 1226 aa16.52■□□□□ 0.24
CPNE1-206ENST00000412056 TAF6LQ9Y6J9 622 aa16.52■□□□□ 0.24
CPNE1-206ENST00000412056 RLFQ13129 1914 aa16.51■□□□□ 0.23
CPNE1-206ENST00000412056 NMT2O60551 498 aa16.51■□□□□ 0.23
CPNE1-206ENST00000412056 PCP11498 1178 aaKnown RBP16.51■□□□□ 0.23
CPNE1-206ENST00000412056 CRHR2Q13324 411 aa16.51■□□□□ 0.23
CPNE1-206ENST00000412056 CEP95Q96GE4 821 aa16.51■□□□□ 0.23
CPNE1-206ENST00000412056 C12orf42Q96LP6 360 aa16.51■□□□□ 0.23
CPNE1-206ENST00000412056 ZCCHC17Q9NP64 241 aaKnown RBP16.51■□□□□ 0.23
CPNE1-206ENST00000412056 ZSWIM8A7E2V4 1837 aa16.5■□□□□ 0.23
CPNE1-206ENST00000412056 B4E1Z4 1266 aa16.5■□□□□ 0.23
CPNE1-206ENST00000412056 CTCFP49711 727 aaPredicted RBP16.5■□□□□ 0.23
CPNE1-206ENST00000412056 KIAA1755Q5JYT7 1200 aa16.5■□□□□ 0.23
CPNE1-206ENST00000412056 CFHR5Q9BXR6 569 aa16.5■□□□□ 0.23
CPNE1-206ENST00000412056 MTMR4Q9NYA4 1195 aa16.5■□□□□ 0.23
CPNE1-206ENST00000412056 NYAP2Q9P242 653 aa16.5■□□□□ 0.23
CPNE1-206ENST00000412056 TMX2Q9Y320 296 aa16.5■□□□□ 0.23
CPNE1-206ENST00000412056 MGAMO43451 1857 aa16.49■□□□□ 0.23
CPNE1-206ENST00000412056 LBX1P52954 281 aa16.49■□□□□ 0.23
CPNE1-206ENST00000412056 USP14P54578 494 aa16.49■□□□□ 0.23
CPNE1-206ENST00000412056 STOX1Q6ZVD7 989 aa16.49■□□□□ 0.23
CPNE1-206ENST00000412056 ESR2Q92731 530 aa16.49■□□□□ 0.23
CPNE1-206ENST00000412056 IL17RBQ9NRM6 502 aa16.49■□□□□ 0.23
CPNE1-206ENST00000412056 SLC45A1Q9Y2W3 748 aa16.49■□□□□ 0.23
CPNE1-206ENST00000412056 ADGRA2Q96PE1 1338 aa16.48■□□□□ 0.23
CPNE1-206ENST00000412056 COL11A1P12107 1806 aaPredicted RBP16.48■□□□□ 0.23
CPNE1-206ENST00000412056 SLC27A2O14975 620 aa16.48■□□□□ 0.23
CPNE1-206ENST00000412056 KDM4AO75164 1064 aa16.48■□□□□ 0.23
CPNE1-206ENST00000412056 TTLL1O95922 423 aa16.48■□□□□ 0.23
CPNE1-206ENST00000412056 CYP2C8P10632 490 aa16.48■□□□□ 0.23
CPNE1-206ENST00000412056 VCAM1P19320 739 aa16.48■□□□□ 0.23
CPNE1-206ENST00000412056 NECTIN1Q15223 517 aa16.48■□□□□ 0.23
CPNE1-206ENST00000412056 CREB3L3Q68CJ9 461 aa16.48■□□□□ 0.23
CPNE1-206ENST00000412056 PARK7Q99497 189 aaKnown RBP16.48■□□□□ 0.23
CPNE1-206ENST00000412056 SH2D4AQ9H788 454 aa16.48■□□□□ 0.23
CPNE1-206ENST00000412056 VCPKMTQ9H867 229 aa16.48■□□□□ 0.23
CPNE1-206ENST00000412056 ZFYVE28Q9HCC9 887 aa16.48■□□□□ 0.23
CPNE1-206ENST00000412056 CLIP2Q9UDT6 1046 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms