RNA–Protein interactions for RNA: ENST00000411938.1

LSM8-202, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

TSL 3

Gene LSM8, Length 290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-202ENST00000411938 USP17L10C9JJH3 530 aa8.58□□□□□ -1.04
LSM8-202ENST00000411938 VAMP4O75379 141 aa8.58□□□□□ -1.04
LSM8-202ENST00000411938 ASNSP08243 561 aa8.58□□□□□ -1.04
LSM8-202ENST00000411938 HOXC6P09630 235 aa8.58□□□□□ -1.04
LSM8-202ENST00000411938 KCNQ1P51787 676 aa8.58□□□□□ -1.04
LSM8-202ENST00000411938 TFF2Q03403 129 aa8.58□□□□□ -1.04
LSM8-202ENST00000411938 LRRC41Q15345 812 aa8.58□□□□□ -1.04
LSM8-202ENST00000411938 SKIV2LQ15477 1246 aaKnown RBP8.58□□□□□ -1.04
LSM8-202ENST00000411938 RABL6Q3YEC7 729 aaPredicted RBP8.58□□□□□ -1.04
LSM8-202ENST00000411938 C1orf53Q5VUE5 145 aa8.58□□□□□ -1.04
LSM8-202ENST00000411938 ANKRD44Q8N8A2 993 aa8.58□□□□□ -1.04
LSM8-202ENST00000411938 NPLOC4Q8TAT6 608 aa8.58□□□□□ -1.04
LSM8-202ENST00000411938 TMEM39AQ9NV64 488 aa8.58□□□□□ -1.04
LSM8-202ENST00000411938 RABGAP1Q9Y3P9 1069 aa8.58□□□□□ -1.04
LSM8-202ENST00000411938 MROH7-TTC4A0A0A0MT08 1334 aa8.57□□□□□ -1.04
LSM8-202ENST00000411938 CACNA1FO60840 1977 aa8.57□□□□□ -1.04
LSM8-202ENST00000411938 FAM86C2PA6NEL3 165 aa8.57□□□□□ -1.04
LSM8-202ENST00000411938 EYA2O00167 538 aa8.57□□□□□ -1.04
LSM8-202ENST00000411938 SEMA3EO15041 775 aa8.57□□□□□ -1.04
LSM8-202ENST00000411938 SEPT4O43236 478 aa8.57□□□□□ -1.04
LSM8-202ENST00000411938 NPM3O75607 178 aaKnown RBP8.57□□□□□ -1.04
LSM8-202ENST00000411938 PHKA1P46020 1223 aa8.57□□□□□ -1.04
LSM8-202ENST00000411938 RHBDL3P58872 404 aa8.57□□□□□ -1.04
LSM8-202ENST00000411938 ATP2B3Q16720 1220 aa8.57□□□□□ -1.04
LSM8-202ENST00000411938 SPTY2D1Q68D10 685 aaPredicted RBP8.57□□□□□ -1.04
LSM8-202ENST00000411938 DPP9Q86TI2 863 aa8.57□□□□□ -1.04
LSM8-202ENST00000411938 SLC44A5Q8NCS7 719 aa8.57□□□□□ -1.04
LSM8-202ENST00000411938 FAM163AQ96GL9 167 aaPredicted RBP8.57□□□□□ -1.04
LSM8-202ENST00000411938 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.57□□□□□ -1.04
LSM8-202ENST00000411938 HERC5Q9UII4 1024 aaKnown RBP8.57□□□□□ -1.04
LSM8-202ENST00000411938 MSRAQ9UJ68 235 aa8.57□□□□□ -1.04
LSM8-202ENST00000411938 PRRC2BQ5JSZ5 2229 aaKnown RBP8.56□□□□□ -1.04
LSM8-202ENST00000411938 GPR75-ASB3A0A0A6YYF3 556 aa8.56□□□□□ -1.04
LSM8-202ENST00000411938 DCDC2CA8MYV0 355 aa8.56□□□□□ -1.04
LSM8-202ENST00000411938 CNMDO75829 334 aa8.56□□□□□ -1.04
LSM8-202ENST00000411938 MRE11P49959 708 aa8.56□□□□□ -1.04
LSM8-202ENST00000411938 JAG1P78504 1218 aa8.56□□□□□ -1.04
LSM8-202ENST00000411938 GRB14Q14449 540 aa8.56□□□□□ -1.04
LSM8-202ENST00000411938 FAM47AQ5JRC9 791 aa8.56□□□□□ -1.04
LSM8-202ENST00000411938 PRAMEF19Q5SWL8 479 aa8.56□□□□□ -1.04
LSM8-202ENST00000411938 CCDC174Q6PII3 467 aa8.56□□□□□ -1.04
LSM8-202ENST00000411938 WWC1Q8IX03 1113 aa8.56□□□□□ -1.04
LSM8-202ENST00000411938 SLC28A3Q9HAS3 691 aa8.56□□□□□ -1.04
LSM8-202ENST00000411938 EMILIN3Q9NT22 766 aa8.56□□□□□ -1.04
LSM8-202ENST00000411938 CEP126Q9P2H0 1117 aa8.56□□□□□ -1.04
LSM8-202ENST00000411938 PHF24Q9UPV7 400 aa8.56□□□□□ -1.04
LSM8-202ENST00000411938 ZDBF2Q9HCK1 2354 aa8.55□□□□□ -1.04
LSM8-202ENST00000411938 ATAD5Q96QE3 1844 aa8.55□□□□□ -1.04
LSM8-202ENST00000411938 USP17L15C9J2P7 530 aa8.55□□□□□ -1.04
LSM8-202ENST00000411938 USP17L13C9JLJ4 530 aa8.55□□□□□ -1.04
LSM8-202ENST00000411938 USP17L11C9JVI0 530 aa8.55□□□□□ -1.04
LSM8-202ENST00000411938 USP17L18D6R9N7 530 aa8.55□□□□□ -1.04
LSM8-202ENST00000411938 USP17L22D6RA61 530 aa8.55□□□□□ -1.04
LSM8-202ENST00000411938 USP17L17D6RBQ6 530 aa8.55□□□□□ -1.04
LSM8-202ENST00000411938 USP17L19D6RCP7 530 aa8.55□□□□□ -1.04
LSM8-202ENST00000411938 USP17L20D6RJB6 530 aa8.55□□□□□ -1.04
LSM8-202ENST00000411938 GPR37L1O60883 481 aa8.55□□□□□ -1.04
LSM8-202ENST00000411938 MECOMQ03112 1051 aa8.55□□□□□ -1.04
LSM8-202ENST00000411938 EXOSC9Q06265 439 aaKnown RBP8.55□□□□□ -1.04
LSM8-202ENST00000411938 USP17L24Q0WX57 530 aa8.55□□□□□ -1.04
LSM8-202ENST00000411938 PPIGQ13427 754 aaKnown RBP eCLIP8.55□□□□□ -1.04
LSM8-202ENST00000411938 RAB30Q15771 203 aa8.55□□□□□ -1.04
LSM8-202ENST00000411938 ZYXQ15942 572 aaKnown RBP8.55□□□□□ -1.04
LSM8-202ENST00000411938 OLFML2BQ68BL8 750 aa8.55□□□□□ -1.04
LSM8-202ENST00000411938 USP17L2Q6R6M4 530 aa8.55□□□□□ -1.04
LSM8-202ENST00000411938 ERICH6Q7L0X2 663 aa8.55□□□□□ -1.04
LSM8-202ENST00000411938 TEX11Q8IYF3 940 aa8.55□□□□□ -1.04
LSM8-202ENST00000411938 FEZ1Q99689 392 aa8.55□□□□□ -1.04
LSM8-202ENST00000411938 TRIM34Q9BYJ4 488 aa8.55□□□□□ -1.04
LSM8-202ENST00000411938 NKX2-4Q9H2Z4 354 aa8.55□□□□□ -1.04
LSM8-202ENST00000411938 XPNPEP3Q9NQH7 507 aa8.55□□□□□ -1.04
LSM8-202ENST00000411938 PI4KBQ9UBF8 816 aa8.55□□□□□ -1.04
LSM8-202ENST00000411938 PLXNA1Q9UIW2 1896 aa8.55□□□□□ -1.04
LSM8-202ENST00000411938 IL16Q14005 1332 aa8.54□□□□□ -1.04
LSM8-202ENST00000411938 GDF11O95390 407 aa8.54□□□□□ -1.04
LSM8-202ENST00000411938 MAP4K4O95819 1239 aaPredicted RBP8.54□□□□□ -1.04
LSM8-202ENST00000411938 PGK1P00558 417 aa8.54□□□□□ -1.04
LSM8-202ENST00000411938 TIMP1P01033 207 aa8.54□□□□□ -1.04
LSM8-202ENST00000411938 IGHA2P01877 340 aa8.54□□□□□ -1.04
LSM8-202ENST00000411938 LDHCP07864 332 aa8.54□□□□□ -1.04
LSM8-202ENST00000411938 RARBP10826 455 aa8.54□□□□□ -1.04
LSM8-202ENST00000411938 ADORA2AP29274 412 aa8.54□□□□□ -1.04
LSM8-202ENST00000411938 FAAP100Q0VG06 881 aa8.54□□□□□ -1.04
LSM8-202ENST00000411938 RASGRF1Q13972 1273 aa8.54□□□□□ -1.04
LSM8-202ENST00000411938 SHROOM1Q2M3G4 852 aaPredicted RBP8.54□□□□□ -1.04
LSM8-202ENST00000411938 TMEM240Q5SV17 173 aa8.54□□□□□ -1.04
LSM8-202ENST00000411938 CCDC102BQ68D86 513 aa8.54□□□□□ -1.04
LSM8-202ENST00000411938 C16orf59Q7L2K0 433 aa8.54□□□□□ -1.04
LSM8-202ENST00000411938 ATG9AQ7Z3C6 839 aa8.54□□□□□ -1.04
LSM8-202ENST00000411938 RNF180Q86T96 592 aa8.54□□□□□ -1.04
LSM8-202ENST00000411938 CRACR2BQ8N4Y2 399 aaPredicted RBP8.54□□□□□ -1.04
LSM8-202ENST00000411938 HERVK_113Q902F9 699 aa8.54□□□□□ -1.04
LSM8-202ENST00000411938 SIL1Q9H173 461 aa8.54□□□□□ -1.04
LSM8-202ENST00000411938 C11orf16Q9NQ32 467 aa8.54□□□□□ -1.04
LSM8-202ENST00000411938 BTBD7Q9P203 1132 aa8.54□□□□□ -1.04
LSM8-202ENST00000411938 ZBTB21Q9ULJ3 1066 aa8.54□□□□□ -1.04
LSM8-202ENST00000411938 BRWD1Q9NSI6 2320 aa8.54□□□□□ -1.04
LSM8-202ENST00000411938 CHD9Q3L8U1 2897 aa8.53□□□□□ -1.04
LSM8-202ENST00000411938 A0A1W2PQ45 241 aaPredicted RBP8.53□□□□□ -1.04
LSM8-202ENST00000411938 A0A1W2PQY0 241 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms