RNA–Protein interactions for RNA: ENST00000411146.1

RNU2-55P-201, Transcript of RNA, U2 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU2-55P, Length 174 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-55P-201ENST00000411146 SHISA3A0PJX4 238 aa3.12□□□□□ -1.91
RNU2-55P-201ENST00000411146 PRRG2O14669 202 aa3.12□□□□□ -1.91
RNU2-55P-201ENST00000411146 PGRP06401 933 aa3.12□□□□□ -1.91
RNU2-55P-201ENST00000411146 TPP2P29144 1249 aaPredicted RBP3.12□□□□□ -1.91
RNU2-55P-201ENST00000411146 GAB4Q2WGN9 574 aa3.12□□□□□ -1.91
RNU2-55P-201ENST00000411146 SV2BQ7L1I2 683 aa3.12□□□□□ -1.91
RNU2-55P-201ENST00000411146 AMIGO3Q86WK7 504 aa3.12□□□□□ -1.91
RNU2-55P-201ENST00000411146 FBXO15Q8NCQ5 510 aaPredicted RBP3.12□□□□□ -1.91
RNU2-55P-201ENST00000411146 ZSCAN18Q8TBC5 510 aaPredicted RBP3.12□□□□□ -1.91
RNU2-55P-201ENST00000411146 FBF1Q8TES7 1133 aa3.12□□□□□ -1.91
RNU2-55P-201ENST00000411146 ANKRD24Q8TF21 1146 aa3.12□□□□□ -1.91
RNU2-55P-201ENST00000411146 KCNN1Q92952 543 aa3.12□□□□□ -1.91
RNU2-55P-201ENST00000411146 TMEM87BQ96K49 555 aa3.12□□□□□ -1.91
RNU2-55P-201ENST00000411146 CD320Q9NPF0 282 aa3.12□□□□□ -1.91
RNU2-55P-201ENST00000411146 DCP1AQ9NPI6 582 aaPredicted RBP3.12□□□□□ -1.91
RNU2-55P-201ENST00000411146 FAM8A1Q9UBU6 413 aa3.12□□□□□ -1.91
RNU2-55P-201ENST00000411146 NOTOA8MTQ0 251 aa3.11□□□□□ -1.91
RNU2-55P-201ENST00000411146 DNAJA2O60884 412 aa3.11□□□□□ -1.91
RNU2-55P-201ENST00000411146 BRD1O95696 1058 aa3.11□□□□□ -1.91
RNU2-55P-201ENST00000411146 HPXP02790 462 aa3.11□□□□□ -1.91
RNU2-55P-201ENST00000411146 INHBBP09529 407 aa3.11□□□□□ -1.91
RNU2-55P-201ENST00000411146 TMEM253P0C7T8 217 aa3.11□□□□□ -1.91
RNU2-55P-201ENST00000411146 SRFP11831 508 aa3.11□□□□□ -1.91
RNU2-55P-201ENST00000411146 LIG3P49916 1009 aa3.11□□□□□ -1.91
RNU2-55P-201ENST00000411146 TAGLNQ01995 201 aaKnown RBP3.11□□□□□ -1.91
RNU2-55P-201ENST00000411146 CCDC85BQ15834 202 aaPredicted RBP3.11□□□□□ -1.91
RNU2-55P-201ENST00000411146 KCNA10Q16322 511 aa3.11□□□□□ -1.91
RNU2-55P-201ENST00000411146 ALG1LQ6GMV1 187 aa3.11□□□□□ -1.91
RNU2-55P-201ENST00000411146 BNC2Q6ZN30 1099 aaPredicted RBP3.11□□□□□ -1.91
RNU2-55P-201ENST00000411146 AGMOQ6ZNB7 445 aa3.11□□□□□ -1.91
RNU2-55P-201ENST00000411146 MRPL41Q8IXM3 137 aaKnown RBP3.11□□□□□ -1.91
RNU2-55P-201ENST00000411146 PANK1Q8TE04 598 aa3.11□□□□□ -1.91
RNU2-55P-201ENST00000411146 MYLIPQ8WY64 445 aa3.11□□□□□ -1.91
RNU2-55P-201ENST00000411146 FAM161BQ96MY7 647 aa3.11□□□□□ -1.91
RNU2-55P-201ENST00000411146 DUSP9Q99956 384 aaKnown RBP3.11□□□□□ -1.91
RNU2-55P-201ENST00000411146 KRTAP17-1Q9BYP8 105 aa3.11□□□□□ -1.91
RNU2-55P-201ENST00000411146 SRCIN1Q9C0H9 1055 aa3.11□□□□□ -1.91
RNU2-55P-201ENST00000411146 MCOLN1Q9GZU1 580 aa3.11□□□□□ -1.91
RNU2-55P-201ENST00000411146 IRF2BPLQ9H1B7 796 aa3.11□□□□□ -1.91
RNU2-55P-201ENST00000411146 TMEM59LQ9UK28 342 aa3.11□□□□□ -1.91
RNU2-55P-201ENST00000411146 CEP131Q9UPN4 1083 aa3.11□□□□□ -1.91
RNU2-55P-201ENST00000411146 CHURC1-FNTBB4DL54 471 aa3.1□□□□□ -1.91
RNU2-55P-201ENST00000411146 B8ZZF3 427 aa3.1□□□□□ -1.91
RNU2-55P-201ENST00000411146 NFIBO00712 420 aa3.1□□□□□ -1.91
RNU2-55P-201ENST00000411146 GIPC1O14908 333 aa3.1□□□□□ -1.91
RNU2-55P-201ENST00000411146 PSPNO60542 156 aa3.1□□□□□ -1.91
RNU2-55P-201ENST00000411146 CTSHP09668 335 aa3.1□□□□□ -1.91
RNU2-55P-201ENST00000411146 ZGLP1P0C6A0 271 aa3.1□□□□□ -1.91
RNU2-55P-201ENST00000411146 MED14OSP0DP75 135 aa3.1□□□□□ -1.91
RNU2-55P-201ENST00000411146 HOXA5P20719 270 aa3.1□□□□□ -1.91
RNU2-55P-201ENST00000411146 HNRNPUQ00839 825 aaKnown RBP eCLIP3.1□□□□□ -1.91
RNU2-55P-201ENST00000411146 KIR3DS1Q14943 382 aa3.1□□□□□ -1.91
RNU2-55P-201ENST00000411146 THAP5Q7Z6K1 395 aa3.1□□□□□ -1.91
RNU2-55P-201ENST00000411146 MCATQ8IVS2 390 aaKnown RBP3.1□□□□□ -1.91
RNU2-55P-201ENST00000411146 SIRT2Q8IXJ6 389 aa3.1□□□□□ -1.91
RNU2-55P-201ENST00000411146 BAHD1Q8TBE0 780 aaPredicted RBP3.1□□□□□ -1.91
RNU2-55P-201ENST00000411146 SHISA4Q96DD7 197 aa3.1□□□□□ -1.91
RNU2-55P-201ENST00000411146 EPB41L4BQ9H329 900 aa3.1□□□□□ -1.91
RNU2-55P-201ENST00000411146 GCM1Q9NP62 436 aa3.1□□□□□ -1.91
RNU2-55P-201ENST00000411146 RAPGEFL1Q9UHV5 662 aa3.1□□□□□ -1.91
RNU2-55P-201ENST00000411146 SPG7Q9UQ90 795 aa3.1□□□□□ -1.91
RNU2-55P-201ENST00000411146 PCDHA11Q9Y5I1 949 aa3.1□□□□□ -1.91
RNU2-55P-201ENST00000411146 AK5Q9Y6K8 562 aa3.1□□□□□ -1.91
RNU2-55P-201ENST00000411146 SDHBP21912 280 aa3.09□□□□□ -1.91
RNU2-55P-201ENST00000411146 LINC00310P59036 64 aa3.09□□□□□ -1.91
RNU2-55P-201ENST00000411146 EGR3Q06889 387 aa3.09□□□□□ -1.91
RNU2-55P-201ENST00000411146 SLC6A19Q695T7 634 aa3.09□□□□□ -1.91
RNU2-55P-201ENST00000411146 SCARA3Q6AZY7 606 aa3.09□□□□□ -1.91
RNU2-55P-201ENST00000411146 ZPBP2Q6X784 338 aa3.09□□□□□ -1.91
RNU2-55P-201ENST00000411146 ZNF605Q86T29 641 aa3.09□□□□□ -1.91
RNU2-55P-201ENST00000411146 ZSCAN29Q8IWY8 852 aaPredicted RBP3.09□□□□□ -1.91
RNU2-55P-201ENST00000411146 DTWD2Q8NBA8 298 aa3.09□□□□□ -1.91
RNU2-55P-201ENST00000411146 PHC3Q8NDX5 983 aa3.09□□□□□ -1.91
RNU2-55P-201ENST00000411146 FBXO27Q8NI29 283 aa3.09□□□□□ -1.91
RNU2-55P-201ENST00000411146 MINPP1Q9UNW1 487 aa3.09□□□□□ -1.91
RNU2-55P-201ENST00000411146 FAM221AA4D161 298 aa3.08□□□□□ -1.92
RNU2-55P-201ENST00000411146 GRIN3BO60391 1043 aa3.08□□□□□ -1.92
RNU2-55P-201ENST00000411146 F13A1P00488 732 aa3.08□□□□□ -1.92
RNU2-55P-201ENST00000411146 PLCG1P19174 1290 aa3.08□□□□□ -1.92
RNU2-55P-201ENST00000411146 EIF4BP23588 611 aaKnown RBP3.08□□□□□ -1.92
RNU2-55P-201ENST00000411146 GNA15P30679 374 aa3.08□□□□□ -1.92
RNU2-55P-201ENST00000411146 KIR3DL1P43629 444 aa3.08□□□□□ -1.92
RNU2-55P-201ENST00000411146 RPS26P62854 115 aaKnown RBP3.08□□□□□ -1.92
RNU2-55P-201ENST00000411146 SSPNQ14714 243 aa3.08□□□□□ -1.92
RNU2-55P-201ENST00000411146 TSPYL5Q86VY4 417 aaPredicted RBP3.08□□□□□ -1.92
RNU2-55P-201ENST00000411146 IRF2BP1Q8IU81 584 aa3.08□□□□□ -1.92
RNU2-55P-201ENST00000411146 G6PC3Q9BUM1 346 aa3.08□□□□□ -1.92
RNU2-55P-201ENST00000411146 DUSP13Q9UII6 198 aa3.08□□□□□ -1.92
RNU2-55P-201ENST00000411146 POLR3KQ9Y2Y1 108 aaPredicted RBP3.08□□□□□ -1.92
RNU2-55P-201ENST00000411146 A0A0G2JLL6 359 aaPredicted RBP3.07□□□□□ -1.92
RNU2-55P-201ENST00000411146 NUAK1O60285 661 aa3.07□□□□□ -1.92
RNU2-55P-201ENST00000411146 PF4P02776 101 aa3.07□□□□□ -1.92
RNU2-55P-201ENST00000411146 BMP7P18075 431 aa3.07□□□□□ -1.92
RNU2-55P-201ENST00000411146 CYP7A1P22680 504 aa3.07□□□□□ -1.92
RNU2-55P-201ENST00000411146 GLDCP23378 1020 aa3.07□□□□□ -1.92
RNU2-55P-201ENST00000411146 DLG4P78352 724 aa3.07□□□□□ -1.92
RNU2-55P-201ENST00000411146 ATP2B2Q01814 1243 aa3.07□□□□□ -1.92
RNU2-55P-201ENST00000411146 TEKQ02763 1124 aa3.07□□□□□ -1.92
RNU2-55P-201ENST00000411146 RPL6Q02878 288 aaKnown RBP3.07□□□□□ -1.92
RNU2-55P-201ENST00000411146 SNW1Q13573 536 aaKnown RBP3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms