RNA–Protein interactions for RNA: ENST00000410062.8

UBE2E3-202, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2E3, Length 1,570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-202ENST00000410062 TAF1CQ15572 869 aaPredicted RBP28.36■■■□□ 2.13
UBE2E3-202ENST00000410062 DSCC1Q9BVC3 393 aa28.36■■■□□ 2.13
UBE2E3-202ENST00000410062 SGSM2O43147 1006 aa28.35■■■□□ 2.13
UBE2E3-202ENST00000410062 SH3D19Q5HYK7 790 aa28.35■■■□□ 2.13
UBE2E3-202ENST00000410062 ZNF444Q8N0Y2 327 aaPredicted RBP28.35■■■□□ 2.13
UBE2E3-202ENST00000410062 CFHR5Q9BXR6 569 aa28.35■■■□□ 2.13
UBE2E3-202ENST00000410062 TACC3Q9Y6A5 838 aa28.35■■■□□ 2.13
UBE2E3-202ENST00000410062 ZYXQ15942 572 aaKnown RBP28.34■■■□□ 2.13
UBE2E3-202ENST00000410062 TREML2Q5T2D2 321 aa28.34■■■□□ 2.13
UBE2E3-202ENST00000410062 FEZ1Q99689 392 aa28.34■■■□□ 2.13
UBE2E3-202ENST00000410062 GNL3Q9BVP2 549 aaKnown RBP eCLIP28.34■■■□□ 2.13
UBE2E3-202ENST00000410062 ZCCHC17Q9NP64 241 aaKnown RBP28.34■■■□□ 2.13
UBE2E3-202ENST00000410062 LOC285556D6RIA3 1793 aa28.34■■■□□ 2.13
UBE2E3-202ENST00000410062 C19orf81C9J6K1 198 aa28.33■■■□□ 2.13
UBE2E3-202ENST00000410062 PROCA1Q8NCQ7 364 aaPredicted RBP28.33■■■□□ 2.13
UBE2E3-202ENST00000410062 A0A1W2PRG0 241 aa28.33■■■□□ 2.12
UBE2E3-202ENST00000410062 ICA1Q05084 483 aa28.33■■■□□ 2.12
UBE2E3-202ENST00000410062 TMOD4Q9NZQ9 345 aa28.33■■■□□ 2.12
UBE2E3-202ENST00000410062 AGTPBP1Q9UPW5 1226 aa28.33■■■□□ 2.12
UBE2E3-202ENST00000410062 DDX52Q9Y2R4 599 aaKnown RBP eCLIP28.33■■■□□ 2.12
UBE2E3-202ENST00000410062 PTH1RQ03431 593 aa28.32■■■□□ 2.12
UBE2E3-202ENST00000410062 FAM47AQ5JRC9 791 aa28.32■■■□□ 2.12
UBE2E3-202ENST00000410062 SIAH1Q8IUQ4 282 aa28.32■■■□□ 2.12
UBE2E3-202ENST00000410062 NBPF3Q9H094 633 aa28.32■■■□□ 2.12
UBE2E3-202ENST00000410062 ZFYVE28Q9HCC9 887 aa28.32■■■□□ 2.12
UBE2E3-202ENST00000410062 EMILIN3Q9NT22 766 aa28.32■■■□□ 2.12
UBE2E3-202ENST00000410062 GREB1LQ9C091 1923 aaPredicted RBP28.31■■■□□ 2.12
UBE2E3-202ENST00000410062 CASP8AP2Q9UKL3 1982 aa28.31■■■□□ 2.12
UBE2E3-202ENST00000410062 KIAA1683Q9H0B3 1180 aa28.31■■■□□ 2.12
UBE2E3-202ENST00000410062 GPR25O00155 361 aa28.3■■■□□ 2.12
UBE2E3-202ENST00000410062 ZNF213O14771 459 aa28.3■■■□□ 2.12
UBE2E3-202ENST00000410062 USP17L2Q6R6M4 530 aa28.3■■■□□ 2.12
UBE2E3-202ENST00000410062 ESYT1Q9BSJ8 1104 aa28.3■■■□□ 2.12
UBE2E3-202ENST00000410062 KANSL2Q9H9L4 492 aa28.3■■■□□ 2.12
UBE2E3-202ENST00000410062 PRDM10Q9NQV6 1147 aa28.3■■■□□ 2.12
UBE2E3-202ENST00000410062 CYP2C8P10632 490 aa28.29■■■□□ 2.12
UBE2E3-202ENST00000410062 TFAP4Q01664 338 aa28.29■■■□□ 2.12
UBE2E3-202ENST00000410062 ATP2B2Q01814 1243 aa28.29■■■□□ 2.12
UBE2E3-202ENST00000410062 TBC1D10CQ8IV04 446 aa28.29■■■□□ 2.12
UBE2E3-202ENST00000410062 LAMA4Q16363 1823 aa28.29■■■□□ 2.12
UBE2E3-202ENST00000410062 CDC45O75419 566 aa28.28■■■□□ 2.12
UBE2E3-202ENST00000410062 TSPY3P0CV98 308 aa28.28■■■□□ 2.12
UBE2E3-202ENST00000410062 TSPY8P0CW00 308 aa28.28■■■□□ 2.12
UBE2E3-202ENST00000410062 EEF2P13639 858 aaKnown RBP28.28■■■□□ 2.12
UBE2E3-202ENST00000410062 ARHGEF10LQ9HCE6 1279 aa28.28■■■□□ 2.12
UBE2E3-202ENST00000410062 TOMM22Q9NS69 142 aa28.28■■■□□ 2.12
UBE2E3-202ENST00000410062 CTNNA3Q9UI47 895 aa28.28■■■□□ 2.12
UBE2E3-202ENST00000410062 FGRP09769 529 aa28.28■■■□□ 2.12
UBE2E3-202ENST00000410062 USP14P54578 494 aa28.28■■■□□ 2.12
UBE2E3-202ENST00000410062 RRP12Q5JTH9 1297 aaKnown RBP28.28■■■□□ 2.12
UBE2E3-202ENST00000410062 ZNF296Q8WUU4 475 aaPredicted RBP28.28■■■□□ 2.12
UBE2E3-202ENST00000410062 PARK7Q99497 189 aaKnown RBP28.28■■■□□ 2.12
UBE2E3-202ENST00000410062 SLC45A1Q9Y2W3 748 aa28.28■■■□□ 2.12
UBE2E3-202ENST00000410062 ORC4O43929 436 aa28.27■■■□□ 2.12
UBE2E3-202ENST00000410062 RANBP6O60518 1105 aaKnown RBP28.27■■■□□ 2.12
UBE2E3-202ENST00000410062 IMMTQ16891 758 aaKnown RBP28.27■■■□□ 2.12
UBE2E3-202ENST00000410062 AKNAD1Q5T1N1 836 aa28.27■■■□□ 2.12
UBE2E3-202ENST00000410062 NEDD1Q8NHV4 660 aa28.27■■■□□ 2.12
UBE2E3-202ENST00000410062 IGKV6D-41A0A0C4DH26 115 aa28.26■■■□□ 2.11
UBE2E3-202ENST00000410062 TSPY2A6NKD2 308 aa28.26■■■□□ 2.11
UBE2E3-202ENST00000410062 TLR2O60603 784 aa28.26■■■□□ 2.11
UBE2E3-202ENST00000410062 MFSD6Q6ZSS7 791 aa28.26■■■□□ 2.11
UBE2E3-202ENST00000410062 STAG1Q8WVM7 1258 aa28.26■■■□□ 2.11
UBE2E3-202ENST00000410062 C12orf42Q96LP6 360 aa28.26■■■□□ 2.11
UBE2E3-202ENST00000410062 TMX2Q9Y320 296 aa28.26■■■□□ 2.11
UBE2E3-202ENST00000410062 NOM1Q5C9Z4 860 aaKnown RBP28.25■■■□□ 2.11
UBE2E3-202ENST00000410062 CEP95Q96GE4 821 aa28.25■■■□□ 2.11
UBE2E3-202ENST00000410062 PLIN4Q96Q06 1357 aa28.25■■■□□ 2.11
UBE2E3-202ENST00000410062 PABPC4Q13310 644 aaKnown RBP eCLIP28.24■■■□□ 2.111e-6■■■■□ 22.5
UBE2E3-202ENST00000410062 CASC1Q6TDU7 716 aa28.24■■■□□ 2.11
UBE2E3-202ENST00000410062 KIAA1211Q6ZU35 1233 aa28.24■■■□□ 2.11
UBE2E3-202ENST00000410062 ADGRA2Q96PE1 1338 aa28.24■■■□□ 2.11
UBE2E3-202ENST00000410062 VCAM1P19320 739 aa28.24■■■□□ 2.11
UBE2E3-202ENST00000410062 KIAA1755Q5JYT7 1200 aa28.24■■■□□ 2.11
UBE2E3-202ENST00000410062 COL13A1Q5TAT6 717 aaPredicted RBP28.24■■■□□ 2.11
UBE2E3-202ENST00000410062 ASCC2Q9H1I8 757 aaPredicted RBP28.24■■■□□ 2.11
UBE2E3-202ENST00000410062 RNF41Q9H4P4 317 aaPredicted RBP28.24■■■□□ 2.11
UBE2E3-202ENST00000410062 SH2D4AQ9H788 454 aa28.24■■■□□ 2.11
UBE2E3-202ENST00000410062 MTMR4Q9NYA4 1195 aa28.24■■■□□ 2.11
UBE2E3-202ENST00000410062 CPA4Q9UI42 421 aa28.24■■■□□ 2.11
UBE2E3-202ENST00000410062 PNMA3Q9UL41 463 aa28.24■■■□□ 2.11
UBE2E3-202ENST00000410062 U3KPZ7 1027 aaPredicted RBP28.24■■■□□ 2.11
UBE2E3-202ENST00000410062 NEDD4P46934 1319 aa28.23■■■□□ 2.11
UBE2E3-202ENST00000410062 FKTNO75072 461 aa28.23■■■□□ 2.11
UBE2E3-202ENST00000410062 NKX2-3Q8TAU0 364 aa28.23■■■□□ 2.11
UBE2E3-202ENST00000410062 MAP4K1Q92918 833 aa28.23■■■□□ 2.11
UBE2E3-202ENST00000410062 LSG1Q9H089 658 aaKnown RBP28.23■■■□□ 2.11
UBE2E3-202ENST00000410062 NYAP2Q9P242 653 aa28.23■■■□□ 2.11
UBE2E3-202ENST00000410062 CLIP2Q9UDT6 1046 aa28.23■■■□□ 2.11
UBE2E3-202ENST00000410062 NMT2O60551 498 aa28.22■■■□□ 2.11
UBE2E3-202ENST00000410062 PCP11498 1178 aaKnown RBP28.22■■■□□ 2.11
UBE2E3-202ENST00000410062 OSBPP22059 807 aa28.22■■■□□ 2.11
UBE2E3-202ENST00000410062 HOXA7P31268 230 aaPredicted RBP28.22■■■□□ 2.11
UBE2E3-202ENST00000410062 SPICE1Q8N0Z3 855 aa28.22■■■□□ 2.11
UBE2E3-202ENST00000410062 SMCR8Q8TEV9 937 aaPredicted RBP28.22■■■□□ 2.11
UBE2E3-202ENST00000410062 VCPKMTQ9H867 229 aa28.22■■■□□ 2.11
UBE2E3-202ENST00000410062 ANO2Q9NQ90 1003 aa28.22■■■□□ 2.11
UBE2E3-202ENST00000410062 IRX3P78415 501 aaPredicted RBP28.21■■■□□ 2.11
UBE2E3-202ENST00000410062 C17orf99Q6UX52 265 aa28.21■■■□□ 2.11
UBE2E3-202ENST00000410062 IL17RBQ9NRM6 502 aa28.21■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms