RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 CDKL5O76039 1030 aa14.52□□□□□ -0.09
CHMP3-204ENST00000409727 F13A1P00488 732 aa14.52□□□□□ -0.09
CHMP3-204ENST00000409727 GUCY1B3Q02153 619 aa14.52□□□□□ -0.09
CHMP3-204ENST00000409727 MCTP1Q6DN14 999 aa14.52□□□□□ -0.09
CHMP3-204ENST00000409727 DGKHQ86XP1 1220 aa14.52□□□□□ -0.09
CHMP3-204ENST00000409727 MTMR14Q8NCE2 650 aa14.52□□□□□ -0.09
CHMP3-204ENST00000409727 NEDD1Q8NHV4 660 aa14.52□□□□□ -0.09
CHMP3-204ENST00000409727 SLC26A6Q9BXS9 759 aa14.52□□□□□ -0.09
CHMP3-204ENST00000409727 EHD4Q9H223 541 aa14.52□□□□□ -0.09
CHMP3-204ENST00000409727 TCP11L1Q9NUJ3 509 aa14.52□□□□□ -0.09
CHMP3-204ENST00000409727 UBE2Q2LH0YL09 131 aa14.51□□□□□ -0.09
CHMP3-204ENST00000409727 ZNF280AP59817 542 aaPredicted RBP14.51□□□□□ -0.09
CHMP3-204ENST00000409727 TROAPQ12815 778 aa14.51□□□□□ -0.09
CHMP3-204ENST00000409727 NTRK3Q16288 839 aa14.51□□□□□ -0.09
CHMP3-204ENST00000409727 PNMA1Q8ND90 353 aa14.51□□□□□ -0.09
CHMP3-204ENST00000409727 TMEM39BQ9GZU3 492 aa14.51□□□□□ -0.09
CHMP3-204ENST00000409727 KIF3AQ9Y496 699 aa14.51□□□□□ -0.09
CHMP3-204ENST00000409727 CNTNAP1P78357 1384 aa14.51□□□□□ -0.09
CHMP3-204ENST00000409727 ASTN2O75129 1339 aaPredicted RBP14.51□□□□□ -0.09
CHMP3-204ENST00000409727 CCDC196A0A1B0GTZ2 297 aa14.5□□□□□ -0.09
CHMP3-204ENST00000409727 DDAH1O94760 285 aa14.5□□□□□ -0.09
CHMP3-204ENST00000409727 NT5C2P49902 561 aa14.5□□□□□ -0.09
CHMP3-204ENST00000409727 SHROOM1Q2M3G4 852 aaPredicted RBP14.5□□□□□ -0.09
CHMP3-204ENST00000409727 CCDC178Q5BJE1 867 aa14.5□□□□□ -0.09
CHMP3-204ENST00000409727 OTUD7BQ6GQQ9 843 aa14.5□□□□□ -0.09
CHMP3-204ENST00000409727 CDAN1Q8IWY9 1227 aa14.5□□□□□ -0.09
CHMP3-204ENST00000409727 DPF2Q92785 391 aa14.5□□□□□ -0.09
CHMP3-204ENST00000409727 ZBED3Q96IU2 234 aaPredicted RBP14.5□□□□□ -0.09
CHMP3-204ENST00000409727 AIFM3Q96NN9 605 aa14.5□□□□□ -0.09
CHMP3-204ENST00000409727 TMEM47Q9BQJ4 181 aa14.5□□□□□ -0.09
CHMP3-204ENST00000409727 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.5□□□□□ -0.09
CHMP3-204ENST00000409727 GJB4Q9NTQ9 266 aa14.5□□□□□ -0.09
CHMP3-204ENST00000409727 SIPA1L1O43166 1804 aa14.5□□□□□ -0.09
CHMP3-204ENST00000409727 MYH8P13535 1937 aa14.5□□□□□ -0.09
CHMP3-204ENST00000409727 PLEKHA8P1O95397 391 aa14.5□□□□□ -0.09
CHMP3-204ENST00000409727 CALM1P0DP23 149 aa14.5□□□□□ -0.09
CHMP3-204ENST00000409727 CALM2P0DP24 149 aa14.5□□□□□ -0.09
CHMP3-204ENST00000409727 CALM3P0DP25 149 aa14.5□□□□□ -0.09
CHMP3-204ENST00000409727 SSRP1Q08945 709 aaKnown RBP14.5□□□□□ -0.09
CHMP3-204ENST00000409727 GPR162Q16538 588 aa14.5□□□□□ -0.09
CHMP3-204ENST00000409727 KIF4BQ2VIQ3 1234 aa14.5□□□□□ -0.09
CHMP3-204ENST00000409727 CTCFLQ8NI51 663 aaPredicted RBP14.5□□□□□ -0.09
CHMP3-204ENST00000409727 FAM151AQ8WW52 585 aa14.5□□□□□ -0.09
CHMP3-204ENST00000409727 NID2Q14112 1375 aa14.5□□□□□ -0.09
CHMP3-204ENST00000409727 ATRNL1Q5VV63 1379 aa14.5□□□□□ -0.09
CHMP3-204ENST00000409727 RCAN1P53805 252 aa14.49□□□□□ -0.09
CHMP3-204ENST00000409727 ATP2B2Q01814 1243 aa14.49□□□□□ -0.09
CHMP3-204ENST00000409727 CERKLQ49MI3 558 aaPredicted RBP14.49□□□□□ -0.09
CHMP3-204ENST00000409727 RASGRP2Q7LDG7 609 aa14.49□□□□□ -0.09
CHMP3-204ENST00000409727 FOXP4Q8IVH2 680 aaPredicted RBP14.49□□□□□ -0.09
CHMP3-204ENST00000409727 ANKS1AQ92625 1134 aa14.49□□□□□ -0.09
CHMP3-204ENST00000409727 C8orf76Q96K31 380 aa14.49□□□□□ -0.09
CHMP3-204ENST00000409727 ANP32EQ9BTT0 268 aa14.49□□□□□ -0.09
CHMP3-204ENST00000409727 SBF1O95248 1867 aa14.49□□□□□ -0.09
CHMP3-204ENST00000409727 hCG_1642624A0A1W2PR95 340 aa14.48□□□□□ -0.09
CHMP3-204ENST00000409727 H7C1D1 291 aa14.48□□□□□ -0.09
CHMP3-204ENST00000409727 GDF11O95390 407 aa14.48□□□□□ -0.09
CHMP3-204ENST00000409727 FMNL1O95466 1100 aaPredicted RBP14.48□□□□□ -0.09
CHMP3-204ENST00000409727 IFNAR1P17181 557 aa14.48□□□□□ -0.09
CHMP3-204ENST00000409727 NCLP19338 710 aaKnown RBP14.48□□□□□ -0.09
CHMP3-204ENST00000409727 C9orf131Q5VYM1 1079 aa14.48□□□□□ -0.09
CHMP3-204ENST00000409727 FAM173BQ6P4H8 233 aa14.48□□□□□ -0.09
CHMP3-204ENST00000409727 GPC2Q8N158 579 aa14.48□□□□□ -0.09
CHMP3-204ENST00000409727 LRRC47Q8N1G4 583 aaKnown RBP14.48□□□□□ -0.09
CHMP3-204ENST00000409727 PIBF1Q8WXW3 757 aa14.48□□□□□ -0.09
CHMP3-204ENST00000409727 ALG1Q9BT22 464 aa14.48□□□□□ -0.09
CHMP3-204ENST00000409727 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.48□□□□□ -0.09
CHMP3-204ENST00000409727 MTMR4Q9NYA4 1195 aa14.48□□□□□ -0.09
CHMP3-204ENST00000409727 DDX11L8A8MPP1 907 aa14.48□□□□□ -0.09
CHMP3-204ENST00000409727 DDNO94850 711 aaPredicted RBP14.48□□□□□ -0.09
CHMP3-204ENST00000409727 GUCY1A2P33402 732 aa14.48□□□□□ -0.09
CHMP3-204ENST00000409727 CLEC17AQ6ZS10 378 aa14.48□□□□□ -0.09
CHMP3-204ENST00000409727 MIGA2Q7L4E1 593 aa14.48□□□□□ -0.09
CHMP3-204ENST00000409727 TRIM22Q8IYM9 498 aa14.48□□□□□ -0.09
CHMP3-204ENST00000409727 RBM28Q9NW13 759 aaKnown RBP14.48□□□□□ -0.09
CHMP3-204ENST00000409727 CLIP2Q9UDT6 1046 aa14.48□□□□□ -0.09
CHMP3-204ENST00000409727 PLIN4Q96Q06 1357 aa14.47□□□□□ -0.09
CHMP3-204ENST00000409727 DICER1Q9UPY3 1922 aaKnown RBP14.47□□□□□ -0.09
CHMP3-204ENST00000409727 GOLGA6L22H0YM25 854 aa14.47□□□□□ -0.09
CHMP3-204ENST00000409727 EPS15P42566 896 aa14.47□□□□□ -0.09
CHMP3-204ENST00000409727 RASA3Q14644 834 aa14.47□□□□□ -0.09
CHMP3-204ENST00000409727 SAMD1Q6SPF0 538 aaPredicted RBP14.47□□□□□ -0.09
CHMP3-204ENST00000409727 NBPF11Q86T75 865 aa14.47□□□□□ -0.09
CHMP3-204ENST00000409727 TRPM4Q8TD43 1214 aa14.47□□□□□ -0.09
CHMP3-204ENST00000409727 GDPD2Q9HCC8 539 aa14.47□□□□□ -0.09
CHMP3-204ENST00000409727 GPRC5DQ9NZD1 345 aa14.47□□□□□ -0.09
CHMP3-204ENST00000409727 HACL1Q9UJ83 578 aa14.47□□□□□ -0.09
CHMP3-204ENST00000409727 RAD21O60216 631 aa14.46□□□□□ -0.09
CHMP3-204ENST00000409727 GOLGA8HP0CJ92 632 aa14.46□□□□□ -0.09
CHMP3-204ENST00000409727 TOP1P11387 765 aaKnown RBP14.46□□□□□ -0.09
CHMP3-204ENST00000409727 PDIA4P13667 645 aaKnown RBP14.46□□□□□ -0.09
CHMP3-204ENST00000409727 TNNI2P48788 182 aa14.46□□□□□ -0.09
CHMP3-204ENST00000409727 AKAP17AQ02040 695 aaKnown RBP14.46□□□□□ -0.09
CHMP3-204ENST00000409727 DNM1Q05193 864 aaKnown RBP14.46□□□□□ -0.09
CHMP3-204ENST00000409727 PPP2R5BQ15173 497 aa14.46□□□□□ -0.09
CHMP3-204ENST00000409727 FKBP1CQ5VVH2 108 aa14.46□□□□□ -0.09
CHMP3-204ENST00000409727 TATDN1Q6P1N9 297 aa14.46□□□□□ -0.09
CHMP3-204ENST00000409727 TMTC3Q6ZXV5 915 aa14.46□□□□□ -0.09
CHMP3-204ENST00000409727 FAM83AQ86UY5 434 aa14.46□□□□□ -0.09
CHMP3-204ENST00000409727 STAG2Q8N3U4 1231 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms