RNA–Protein interactions for RNA: ENST00000409483.5

PTPRN2-205, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN2, Length 4,711 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-205ENST00000409483 ECM2O94769 699 aaPredicted RBP18.52■□□□□ 0.56
PTPRN2-205ENST00000409483 MRPL12P52815 198 aaKnown RBP18.52■□□□□ 0.56
PTPRN2-205ENST00000409483 LRRC47Q8N1G4 583 aaKnown RBP18.52■□□□□ 0.56
PTPRN2-205ENST00000409483 SRP68Q9UHB9 627 aaKnown RBP18.52■□□□□ 0.56
PTPRN2-205ENST00000409483 ZNF215Q9UL58 517 aaPredicted RBP18.52■□□□□ 0.56
PTPRN2-205ENST00000409483 IQSEC2Q5JU85 1478 aa18.52■□□□□ 0.56
PTPRN2-205ENST00000409483 GSTTP1A0A1W2PQM5 241 aa18.52■□□□□ 0.56
PTPRN2-205ENST00000409483 ARID5BQ14865 1188 aa18.52■□□□□ 0.56
PTPRN2-205ENST00000409483 SMIM5Q71RC9 77 aa18.52■□□□□ 0.56
PTPRN2-205ENST00000409483 MED23Q9ULK4 1368 aa18.52■□□□□ 0.56
PTPRN2-205ENST00000409483 MCM3P25205 808 aa18.52■□□□□ 0.56
PTPRN2-205ENST00000409483 DPP8Q6V1X1 898 aaPredicted RBP18.52■□□□□ 0.56
PTPRN2-205ENST00000409483 BICD1Q96G01 975 aa18.52■□□□□ 0.56
PTPRN2-205ENST00000409483 SMCO2A6NFE2 343 aa18.52■□□□□ 0.55
PTPRN2-205ENST00000409483 SPECC1LQ69YQ0 1117 aa18.52■□□□□ 0.55
PTPRN2-205ENST00000409483 GPR101Q96P66 508 aaPredicted RBP18.52■□□□□ 0.55
PTPRN2-205ENST00000409483 ANKRD62A6NC57 917 aa18.51■□□□□ 0.55
PTPRN2-205ENST00000409483 SLC1A4P43007 532 aa18.51■□□□□ 0.55
PTPRN2-205ENST00000409483 DOK7Q18PE1 504 aa18.51■□□□□ 0.55
PTPRN2-205ENST00000409483 MAEAQ7L5Y9 396 aa18.51■□□□□ 0.55
PTPRN2-205ENST00000409483 PGBD1Q96JS3 809 aa18.51■□□□□ 0.55
PTPRN2-205ENST00000409483 ARHGAP6O43182 974 aa18.51■□□□□ 0.55
PTPRN2-205ENST00000409483 CEP112Q8N8E3 955 aa18.51■□□□□ 0.55
PTPRN2-205ENST00000409483 CSRNP2Q9H175 543 aa18.51■□□□□ 0.55
PTPRN2-205ENST00000409483 ADGRL3Q9HAR2 1447 aa18.51■□□□□ 0.55
PTPRN2-205ENST00000409483 INO80Q9ULG1 1556 aaPredicted RBP18.51■□□□□ 0.55
PTPRN2-205ENST00000409483 ATP10DQ9P241 1426 aa18.51■□□□□ 0.55
PTPRN2-205ENST00000409483 USP31Q70CQ4 1352 aa18.51■□□□□ 0.55
PTPRN2-205ENST00000409483 CYP2E1P05181 493 aaPredicted RBP18.51■□□□□ 0.55
PTPRN2-205ENST00000409483 FERMT2Q96AC1 680 aa18.51■□□□□ 0.55
PTPRN2-205ENST00000409483 NAA15Q9BXJ9 866 aaKnown RBP18.51■□□□□ 0.55
PTPRN2-205ENST00000409483 SEPT7Q16181 437 aaKnown RBP18.51■□□□□ 0.55
PTPRN2-205ENST00000409483 ERCC6LQ2NKX8 1250 aa18.51■□□□□ 0.55
PTPRN2-205ENST00000409483 RGS22Q8NE09 1264 aa18.51■□□□□ 0.55
PTPRN2-205ENST00000409483 SYMPKQ92797 1274 aaKnown RBP18.51■□□□□ 0.55
PTPRN2-205ENST00000409483 FAM13AO94988 1023 aa18.5■□□□□ 0.55
PTPRN2-205ENST00000409483 FNBP4Q8N3X1 1017 aaPredicted RBP18.5■□□□□ 0.55
PTPRN2-205ENST00000409483 IMPACTQ9P2X3 320 aa18.5■□□□□ 0.55
PTPRN2-205ENST00000409483 TTF2Q9UNY4 1162 aaKnown RBP18.5■□□□□ 0.55
PTPRN2-205ENST00000409483 LAMC1P11047 1609 aa18.5■□□□□ 0.55
PTPRN2-205ENST00000409483 TERF1P54274 439 aa18.5■□□□□ 0.55
PTPRN2-205ENST00000409483 DIXDC1Q155Q3 683 aa18.5■□□□□ 0.55
PTPRN2-205ENST00000409483 CABP7Q86V35 215 aa18.5■□□□□ 0.55
PTPRN2-205ENST00000409483 REXO1Q8N1G1 1221 aaKnown RBP18.5■□□□□ 0.55
PTPRN2-205ENST00000409483 ATG3Q9NT62 314 aa18.5■□□□□ 0.55
PTPRN2-205ENST00000409483 KLRF2D3W0D1 207 aa18.5■□□□□ 0.55
PTPRN2-205ENST00000409483 TECP42680 631 aa18.5■□□□□ 0.55
PTPRN2-205ENST00000409483 STXBP4Q6ZWJ1 553 aa18.5■□□□□ 0.55
PTPRN2-205ENST00000409483 FAM207AQ9NSI2 230 aaPredicted RBP18.5■□□□□ 0.55
PTPRN2-205ENST00000409483 CAMSAP1Q5T5Y3 1602 aa18.5■□□□□ 0.55
PTPRN2-205ENST00000409483 HERC4Q5GLZ8 1057 aaPredicted RBP18.49■□□□□ 0.55
PTPRN2-205ENST00000409483 BLIDQ8IZY5 108 aa18.49■□□□□ 0.55
PTPRN2-205ENST00000409483 TDRD7Q8NHU6 1098 aaKnown RBP18.49■□□□□ 0.55
PTPRN2-205ENST00000409483 DYDC1Q8WWB3 177 aa18.49■□□□□ 0.55
PTPRN2-205ENST00000409483 DIP2CQ9Y2E4 1556 aa18.49■□□□□ 0.55
PTPRN2-205ENST00000409483 ZNF804BA4D1E1 1349 aa18.49■□□□□ 0.55
PTPRN2-205ENST00000409483 SOS2Q07890 1332 aaPredicted RBP18.49■□□□□ 0.55
PTPRN2-205ENST00000409483 SCG2P13521 617 aa18.49■□□□□ 0.55
PTPRN2-205ENST00000409483 TBC1D10CQ8IV04 446 aa18.49■□□□□ 0.55
PTPRN2-205ENST00000409483 IFT81Q8WYA0 676 aa18.49■□□□□ 0.55
PTPRN2-205ENST00000409483 PLEKHA4Q9H4M7 779 aa18.49■□□□□ 0.55
PTPRN2-205ENST00000409483 ARPP21Q9UBL0 812 aaPredicted RBP18.49■□□□□ 0.55
PTPRN2-205ENST00000409483 SHTN1A0MZ66 631 aa18.49■□□□□ 0.55
PTPRN2-205ENST00000409483 TMEM110-MUSTN1A8MSY1 372 aa18.49■□□□□ 0.55
PTPRN2-205ENST00000409483 SH2B2O14492 632 aaPredicted RBP18.49■□□□□ 0.55
PTPRN2-205ENST00000409483 WDHD1O75717 1129 aaPredicted RBP18.49■□□□□ 0.55
PTPRN2-205ENST00000409483 CKAP4Q07065 602 aaKnown RBP18.49■□□□□ 0.55
PTPRN2-205ENST00000409483 GDAP1L1Q96MZ0 367 aa18.49■□□□□ 0.55
PTPRN2-205ENST00000409483 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.49■□□□□ 0.55
PTPRN2-205ENST00000409483 VPS18Q9P253 973 aa18.49■□□□□ 0.55
PTPRN2-205ENST00000409483 ATP1A3P13637 1013 aa18.48■□□□□ 0.55
PTPRN2-205ENST00000409483 STOX1Q6ZVD7 989 aa18.48■□□□□ 0.55
PTPRN2-205ENST00000409483 KIAA0825Q8IV33 1275 aa18.48■□□□□ 0.55
PTPRN2-205ENST00000409483 MRFAP1L1Q96HT8 127 aa18.48■□□□□ 0.55
PTPRN2-205ENST00000409483 PPP2R5BQ15173 497 aa18.48■□□□□ 0.55
PTPRN2-205ENST00000409483 NCAPH2Q6IBW4 605 aa18.48■□□□□ 0.55
PTPRN2-205ENST00000409483 DYNLL2Q96FJ2 89 aa18.48■□□□□ 0.55
PTPRN2-205ENST00000409483 HDAC9Q9UKV0 1011 aa18.48■□□□□ 0.55
PTPRN2-205ENST00000409483 ADCY7P51828 1080 aa18.48■□□□□ 0.55
PTPRN2-205ENST00000409483 CALCRLQ16602 461 aa18.48■□□□□ 0.55
PTPRN2-205ENST00000409483 CCDC174Q6PII3 467 aa18.48■□□□□ 0.55
PTPRN2-205ENST00000409483 USP40Q9NVE5 1235 aa18.48■□□□□ 0.55
PTPRN2-205ENST00000409483 POLR3EQ9NVU0 708 aa18.48■□□□□ 0.55
PTPRN2-205ENST00000409483 KIDINS220Q9ULH0 1771 aa18.48■□□□□ 0.55
PTPRN2-205ENST00000409483 NRKQ7Z2Y5 1582 aa18.47■□□□□ 0.55
PTPRN2-205ENST00000409483 A0A1W2PQ27 194 aa18.47■□□□□ 0.55
PTPRN2-205ENST00000409483 A0A1W2PQ64 194 aa18.47■□□□□ 0.55
PTPRN2-205ENST00000409483 A0A1W2PQD8 194 aa18.47■□□□□ 0.55
PTPRN2-205ENST00000409483 DDX39AO00148 427 aaKnown RBP18.47■□□□□ 0.55
PTPRN2-205ENST00000409483 POTEJP0CG39 1038 aa18.47■□□□□ 0.55
PTPRN2-205ENST00000409483 STRBPQ96SI9 672 aaKnown RBP18.47■□□□□ 0.55
PTPRN2-205ENST00000409483 HINFPQ9BQA5 517 aa18.47■□□□□ 0.55
PTPRN2-205ENST00000409483 NLRC4Q9NPP4 1024 aa18.47■□□□□ 0.55
PTPRN2-205ENST00000409483 PCDHB6Q9Y5E3 794 aa18.47■□□□□ 0.55
PTPRN2-205ENST00000409483 USP17L8P0C7I0 530 aa18.47■□□□□ 0.55
PTPRN2-205ENST00000409483 BTDP43251 543 aa18.47■□□□□ 0.55
PTPRN2-205ENST00000409483 CDC42BPGQ6DT37 1551 aa18.47■□□□□ 0.55
PTPRN2-205ENST00000409483 UBE4AQ14139 1066 aa18.47■□□□□ 0.55
PTPRN2-205ENST00000409483 RNF187Q5TA31 235 aaPredicted RBP18.47■□□□□ 0.55
PTPRN2-205ENST00000409483 HS2ST1Q7LGA3 356 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms