RNA–Protein interactions for RNA: ENST00000409292.5

LSM5-202, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-202ENST00000409292 ZKSCAN1P17029 563 aaPredicted RBP9.52□□□□□ -0.89
LSM5-202ENST00000409292 MAPK4P31152 587 aa9.52□□□□□ -0.89
LSM5-202ENST00000409292 CAP2P40123 477 aa9.52□□□□□ -0.89
LSM5-202ENST00000409292 HMGCS2P54868 508 aa9.52□□□□□ -0.89
LSM5-202ENST00000409292 MECOMQ03112 1051 aa9.52□□□□□ -0.89
LSM5-202ENST00000409292 RASGRF1Q13972 1273 aa9.52□□□□□ -0.89
LSM5-202ENST00000409292 THSD4Q6ZMP0 1018 aa9.52□□□□□ -0.89
LSM5-202ENST00000409292 TEX11Q8IYF3 940 aa9.52□□□□□ -0.89
LSM5-202ENST00000409292 CRACR2BQ8N4Y2 399 aaPredicted RBP9.52□□□□□ -0.89
LSM5-202ENST00000409292 GPRC5AQ8NFJ5 357 aa9.52□□□□□ -0.89
LSM5-202ENST00000409292 WNT2BQ93097 391 aa9.52□□□□□ -0.89
LSM5-202ENST00000409292 UBE2OQ9C0C9 1292 aaKnown RBP9.52□□□□□ -0.89
LSM5-202ENST00000409292 PI4KBQ9UBF8 816 aa9.52□□□□□ -0.89
LSM5-202ENST00000409292 PRKAG2Q9UGJ0 569 aa9.52□□□□□ -0.89
LSM5-202ENST00000409292 ATRNL1Q5VV63 1379 aa9.51□□□□□ -0.89
LSM5-202ENST00000409292 MYH2Q9UKX2 1941 aa9.51□□□□□ -0.89
LSM5-202ENST00000409292 SRGAP3O43295 1099 aa9.51□□□□□ -0.89
LSM5-202ENST00000409292 IGSF3O75054 1194 aa9.51□□□□□ -0.89
LSM5-202ENST00000409292 HLA-DOAP06340 250 aa9.51□□□□□ -0.89
LSM5-202ENST00000409292 XRCC5P13010 732 aaKnown RBP9.51□□□□□ -0.89
LSM5-202ENST00000409292 CYP2B6P20813 491 aa9.51□□□□□ -0.89
LSM5-202ENST00000409292 TIMM10P62072 90 aa9.51□□□□□ -0.89
LSM5-202ENST00000409292 CCNA1P78396 465 aa9.51□□□□□ -0.89
LSM5-202ENST00000409292 G3BP1Q13283 466 aaKnown RBP eCLIP9.51□□□□□ -0.89
LSM5-202ENST00000409292 NBR1Q14596 966 aa9.51□□□□□ -0.89
LSM5-202ENST00000409292 PROX2Q3B8N5 592 aa9.51□□□□□ -0.89
LSM5-202ENST00000409292 TREML2Q5T2D2 321 aa9.51□□□□□ -0.89
LSM5-202ENST00000409292 SH3BP5LQ7L8J4 393 aa9.51□□□□□ -0.89
LSM5-202ENST00000409292 LAPTM4BQ86VI4 370 aa9.51□□□□□ -0.89
LSM5-202ENST00000409292 FOXP4Q8IVH2 680 aaPredicted RBP9.51□□□□□ -0.89
LSM5-202ENST00000409292 TDHQ8IZJ6 230 aa9.51□□□□□ -0.89
LSM5-202ENST00000409292 DEFB123Q8N688 67 aa9.51□□□□□ -0.89
LSM5-202ENST00000409292 SPATA5Q8NB90 893 aa9.51□□□□□ -0.89
LSM5-202ENST00000409292 XAGE2Q96GT9 111 aa9.51□□□□□ -0.89
LSM5-202ENST00000409292 LBHD1Q9BQE6 289 aaPredicted RBP9.51□□□□□ -0.89
LSM5-202ENST00000409292 ASCC2Q9H1I8 757 aaPredicted RBP9.51□□□□□ -0.89
LSM5-202ENST00000409292 ZMYND8Q9ULU4 1186 aaPredicted RBP9.51□□□□□ -0.89
LSM5-202ENST00000409292 DOCK1Q14185 1865 aa9.51□□□□□ -0.89
LSM5-202ENST00000409292 IPO8O15397 1037 aaKnown RBP9.5□□□□□ -0.89
LSM5-202ENST00000409292 ADORA1P30542 326 aa9.5□□□□□ -0.89
LSM5-202ENST00000409292 RGS2P41220 211 aa9.5□□□□□ -0.89
LSM5-202ENST00000409292 PTPN5P54829 565 aa9.5□□□□□ -0.89
LSM5-202ENST00000409292 LRIT3Q3SXY7 679 aa9.5□□□□□ -0.89
LSM5-202ENST00000409292 SH3D19Q5HYK7 790 aa9.5□□□□□ -0.89
LSM5-202ENST00000409292 CCDC158Q5M9N0 1113 aa9.5□□□□□ -0.89
LSM5-202ENST00000409292 LRCH3Q96II8 777 aa9.5□□□□□ -0.89
LSM5-202ENST00000409292 GDF15Q99988 308 aa9.5□□□□□ -0.89
LSM5-202ENST00000409292 WDR18Q9BV38 432 aa9.5□□□□□ -0.89
LSM5-202ENST00000409292 DDX4Q9NQI0 724 aaKnown RBP9.5□□□□□ -0.89
LSM5-202ENST00000409292 MORF4L1Q9UBU8 362 aa9.5□□□□□ -0.89
LSM5-202ENST00000409292 NOB1Q9ULX3 412 aaKnown RBP9.5□□□□□ -0.89
LSM5-202ENST00000409292 PA2G4Q9UQ80 394 aaKnown RBP9.5□□□□□ -0.89
LSM5-202ENST00000409292 STXBP5LQ9Y2K9 1186 aa9.5□□□□□ -0.89
LSM5-202ENST00000409292 COL2A1P02458 1487 aaPredicted RBP9.5□□□□□ -0.89
LSM5-202ENST00000409292 HTTP42858 3142 aa9.49□□□□□ -0.89
LSM5-202ENST00000409292 USP17L10C9JJH3 530 aa9.49□□□□□ -0.89
LSM5-202ENST00000409292 MSCO60682 206 aa9.49□□□□□ -0.89
LSM5-202ENST00000409292 HOXA7P31268 230 aaPredicted RBP9.49□□□□□ -0.89
LSM5-202ENST00000409292 BACE1P56817 501 aa9.49□□□□□ -0.89
LSM5-202ENST00000409292 RHBDL3P58872 404 aa9.49□□□□□ -0.89
LSM5-202ENST00000409292 SLFN5Q08AF3 891 aa9.49□□□□□ -0.89
LSM5-202ENST00000409292 TFCP2Q12800 502 aa9.49□□□□□ -0.89
LSM5-202ENST00000409292 OS9Q13438 667 aaPredicted RBP9.49□□□□□ -0.89
LSM5-202ENST00000409292 MTMR2Q13614 643 aa9.49□□□□□ -0.89
LSM5-202ENST00000409292 MFSD14CQ5VZR4 134 aa9.49□□□□□ -0.89
LSM5-202ENST00000409292 NAA16Q6N069 864 aaPredicted RBP9.49□□□□□ -0.89
LSM5-202ENST00000409292 CCDC84Q86UT8 332 aaPredicted RBP9.49□□□□□ -0.89
LSM5-202ENST00000409292 CERS3Q8IU89 383 aa9.49□□□□□ -0.89
LSM5-202ENST00000409292 DIS3LQ8TF46 1054 aaKnown RBP9.49□□□□□ -0.89
LSM5-202ENST00000409292 NSUN4Q96CB9 384 aaKnown RBP9.49□□□□□ -0.89
LSM5-202ENST00000409292 FEZ1Q99689 392 aa9.49□□□□□ -0.89
LSM5-202ENST00000409292 HMG20BQ9P0W2 317 aa9.49□□□□□ -0.89
LSM5-202ENST00000409292 OGDHLQ9ULD0 1010 aa9.49□□□□□ -0.89
LSM5-202ENST00000409292 ZNF521Q96K83 1311 aa9.49□□□□□ -0.89
LSM5-202ENST00000409292 RFX7Q2KHR2 1363 aa9.49□□□□□ -0.89
LSM5-202ENST00000409292 FAM196BA6NMK8 535 aa9.48□□□□□ -0.89
LSM5-202ENST00000409292 SOX1O00570 391 aaPredicted RBP9.48□□□□□ -0.89
LSM5-202ENST00000409292 MAP3K7O43318 606 aa9.48□□□□□ -0.89
LSM5-202ENST00000409292 SYN1P17600 705 aa9.48□□□□□ -0.89
LSM5-202ENST00000409292 MAGEA10P43363 369 aaPredicted RBP9.48□□□□□ -0.89
LSM5-202ENST00000409292 HERVK_113P62684 666 aa9.48□□□□□ -0.89
LSM5-202ENST00000409292 TTC39AQ5SRH9 613 aa9.48□□□□□ -0.89
LSM5-202ENST00000409292 WDR78Q5VTH9 848 aa9.48□□□□□ -0.89
LSM5-202ENST00000409292 PLEKHH3Q7Z736 793 aa9.48□□□□□ -0.89
LSM5-202ENST00000409292 ANKK1Q8NFD2 765 aa9.48□□□□□ -0.89
LSM5-202ENST00000409292 PAGR1Q9BTK6 254 aa9.48□□□□□ -0.89
LSM5-202ENST00000409292 GJD2Q9UKL4 321 aa9.48□□□□□ -0.89
LSM5-202ENST00000409292 IVNS1ABPQ9Y6Y0 642 aa9.48□□□□□ -0.89
LSM5-202ENST00000409292 TRIM6-TRIM34B2RNG4 842 aa9.47□□□□□ -0.89
LSM5-202ENST00000409292 GNAI2P04899 355 aa9.47□□□□□ -0.89
LSM5-202ENST00000409292 USP14P54578 494 aa9.47□□□□□ -0.89
LSM5-202ENST00000409292 USP17L2Q6R6M4 530 aa9.47□□□□□ -0.89
LSM5-202ENST00000409292 TRIB2Q92519 343 aa9.47□□□□□ -0.89
LSM5-202ENST00000409292 ARHGAP45Q92619 1136 aa9.47□□□□□ -0.89
LSM5-202ENST00000409292 P2RX7Q99572 595 aaKnown RBP9.47□□□□□ -0.89
LSM5-202ENST00000409292 APBA2Q99767 749 aa9.47□□□□□ -0.89
LSM5-202ENST00000409292 KIAA1468Q9P260 1216 aa9.47□□□□□ -0.89
LSM5-202ENST00000409292 MKI67P46013 3256 aaKnown RBP9.46□□□□□ -0.89
LSM5-202ENST00000409292 USP17L15C9J2P7 530 aa9.46□□□□□ -0.9
LSM5-202ENST00000409292 USP17L13C9JLJ4 530 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms