RNA–Protein interactions for RNA: ENST00000408378.1

MIR548I3-201, Transcript of microRNA 548i-3, humanhuman

BASIC

Gene MIR548I3, Length 149 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR548I3-201ENST00000408378 ATP2B4P23634 1241 aa4.59□□□□□ -1.67
MIR548I3-201ENST00000408378 VIPR1P32241 457 aa4.59□□□□□ -1.67
MIR548I3-201ENST00000408378 CDR1P51861 262 aa4.59□□□□□ -1.67
MIR548I3-201ENST00000408378 Q8N1X5 172 aa4.59□□□□□ -1.67
MIR548I3-201ENST00000408378 TMEM39AQ9NV64 488 aa4.59□□□□□ -1.67
MIR548I3-201ENST00000408378 DUSP13Q9UII6 198 aa4.59□□□□□ -1.67
MIR548I3-201ENST00000408378 CYR61O00622 381 aa4.58□□□□□ -1.68
MIR548I3-201ENST00000408378 FANCGO15287 622 aa4.58□□□□□ -1.68
MIR548I3-201ENST00000408378 LTKP29376 864 aa4.58□□□□□ -1.68
MIR548I3-201ENST00000408378 SLURP1P55000 103 aa4.58□□□□□ -1.68
MIR548I3-201ENST00000408378 NR0B2Q15466 257 aa4.58□□□□□ -1.68
MIR548I3-201ENST00000408378 ZFYVE27Q5T4F4 411 aa4.58□□□□□ -1.68
MIR548I3-201ENST00000408378 CPZQ66K79 652 aa4.58□□□□□ -1.68
MIR548I3-201ENST00000408378 LETMD1Q6P1Q0 360 aa4.58□□□□□ -1.68
MIR548I3-201ENST00000408378 FNBP4Q8N3X1 1017 aaPredicted RBP4.58□□□□□ -1.68
MIR548I3-201ENST00000408378 KCT2Q8NC54 265 aa4.58□□□□□ -1.68
MIR548I3-201ENST00000408378 DHX38Q92620 1227 aaKnown RBP4.58□□□□□ -1.68
MIR548I3-201ENST00000408378 SYTL4Q96C24 671 aaPredicted RBP4.58□□□□□ -1.68
MIR548I3-201ENST00000408378 FBRSQ9HAH7 460 aa4.58□□□□□ -1.68
MIR548I3-201ENST00000408378 CCDC87Q9NVE4 849 aa4.58□□□□□ -1.68
MIR548I3-201ENST00000408378 SLAIN2Q9P270 581 aa4.58□□□□□ -1.68
MIR548I3-201ENST00000408378 PRAMEF27A3QJZ7 478 aa4.57□□□□□ -1.68
MIR548I3-201ENST00000408378 FZD6O60353 706 aa4.57□□□□□ -1.68
MIR548I3-201ENST00000408378 GADD45BO75293 160 aaPredicted RBP4.57□□□□□ -1.68
MIR548I3-201ENST00000408378 ARNTP27540 789 aa4.57□□□□□ -1.68
MIR548I3-201ENST00000408378 FLIIQ13045 1269 aa4.57□□□□□ -1.68
MIR548I3-201ENST00000408378 ELOAQ14241 798 aaKnown RBP4.57□□□□□ -1.68
MIR548I3-201ENST00000408378 NT5DC1Q5TFE4 455 aa4.57□□□□□ -1.68
MIR548I3-201ENST00000408378 GJD3Q8N144 294 aa4.57□□□□□ -1.68
MIR548I3-201ENST00000408378 MZB1Q8WU39 189 aa4.57□□□□□ -1.68
MIR548I3-201ENST00000408378 GTF3C2Q8WUA4 911 aaPredicted RBP4.57□□□□□ -1.68
MIR548I3-201ENST00000408378 CLP1Q92989 425 aaKnown RBP4.57□□□□□ -1.68
MIR548I3-201ENST00000408378 SHISA4Q96DD7 197 aa4.57□□□□□ -1.68
MIR548I3-201ENST00000408378 C8orf49Q96NF6 230 aa4.57□□□□□ -1.68
MIR548I3-201ENST00000408378 ZNF20P17024 532 aa4.56□□□□□ -1.68
MIR548I3-201ENST00000408378 SNX17Q15036 470 aa4.56□□□□□ -1.68
MIR548I3-201ENST00000408378 DTHD1Q6ZMT9 781 aa4.56□□□□□ -1.68
MIR548I3-201ENST00000408378 CDH24Q86UP0 819 aa4.56□□□□□ -1.68
MIR548I3-201ENST00000408378 SPPL2CQ8IUH8 684 aa4.56□□□□□ -1.68
MIR548I3-201ENST00000408378 ADGRG2Q8IZP9 1017 aa4.56□□□□□ -1.68
MIR548I3-201ENST00000408378 ZNF507Q8TCN5 953 aa4.56□□□□□ -1.68
MIR548I3-201ENST00000408378 DDX1Q92499 740 aaKnown RBP4.56□□□□□ -1.68
MIR548I3-201ENST00000408378 FFAR3O14843 346 aa4.55□□□□□ -1.68
MIR548I3-201ENST00000408378 CYP7A1P22680 504 aa4.55□□□□□ -1.68
MIR548I3-201ENST00000408378 CNR2P34972 360 aa4.55□□□□□ -1.68
MIR548I3-201ENST00000408378 ACVRL1P37023 503 aa4.55□□□□□ -1.68
MIR548I3-201ENST00000408378 KIR3DL1P43629 444 aa4.55□□□□□ -1.68
MIR548I3-201ENST00000408378 PLCB3Q01970 1234 aa4.55□□□□□ -1.68
MIR548I3-201ENST00000408378 RING1Q06587 406 aa4.55□□□□□ -1.68
MIR548I3-201ENST00000408378 NKG7Q16617 165 aa4.55□□□□□ -1.68
MIR548I3-201ENST00000408378 ZNF746Q6NUN9 644 aaPredicted RBP4.55□□□□□ -1.68
MIR548I3-201ENST00000408378 SPRED1Q7Z699 444 aa4.55□□□□□ -1.68
MIR548I3-201ENST00000408378 ELMO3Q96BJ8 720 aa4.55□□□□□ -1.68
MIR548I3-201ENST00000408378 LOXL4Q96JB6 756 aa4.55□□□□□ -1.68
MIR548I3-201ENST00000408378 EBF1Q9UH73 591 aa4.55□□□□□ -1.68
MIR548I3-201ENST00000408378 PCDHA11Q9Y5I1 949 aa4.55□□□□□ -1.68
MIR548I3-201ENST00000408378 A0A1B0GTL3 188 aa4.54□□□□□ -1.68
MIR548I3-201ENST00000408378 C1QTNF3-AMACRE9PGA6 284 aa4.54□□□□□ -1.68
MIR548I3-201ENST00000408378 NCKAP1LP55160 1127 aa4.54□□□□□ -1.68
MIR548I3-201ENST00000408378 FCGRTP55899 365 aa4.54□□□□□ -1.68
MIR548I3-201ENST00000408378 CHRNEQ04844 493 aa4.54□□□□□ -1.68
MIR548I3-201ENST00000408378 SLBPQ14493 270 aaKnown RBP eCLIP4.54□□□□□ -1.68
MIR548I3-201ENST00000408378 GAB4Q2WGN9 574 aa4.54□□□□□ -1.68
MIR548I3-201ENST00000408378 PRPF40BQ6NWY9 871 aaKnown RBP4.54□□□□□ -1.68
MIR548I3-201ENST00000408378 IGDCC3Q8IVU1 814 aa4.54□□□□□ -1.68
MIR548I3-201ENST00000408378 MFSD2AQ8NA29 543 aa4.54□□□□□ -1.68
MIR548I3-201ENST00000408378 GRIN3AQ8TCU5 1115 aa4.54□□□□□ -1.68
MIR548I3-201ENST00000408378 SH3RF3Q8TEJ3 882 aaPredicted RBP4.54□□□□□ -1.68
MIR548I3-201ENST00000408378 SPATA25Q9BR10 227 aa4.54□□□□□ -1.68
MIR548I3-201ENST00000408378 KRTAP3-1Q9BYR8 98 aa4.54□□□□□ -1.68
MIR548I3-201ENST00000408378 DUSP15Q9H1R2 295 aaPredicted RBP4.54□□□□□ -1.68
MIR548I3-201ENST00000408378 PCDHA4Q9UN74 947 aa4.54□□□□□ -1.68
MIR548I3-201ENST00000408378 EFEMP2O95967 443 aa4.53□□□□□ -1.68
MIR548I3-201ENST00000408378 USP51Q70EK9 711 aa4.53□□□□□ -1.68
MIR548I3-201ENST00000408378 ANKS4BQ8N8V4 417 aa4.53□□□□□ -1.68
MIR548I3-201ENST00000408378 EMILIN2Q9BXX0 1053 aa4.53□□□□□ -1.68
MIR548I3-201ENST00000408378 TRIT1Q9H3H1 467 aaKnown RBP4.53□□□□□ -1.68
MIR548I3-201ENST00000408378 DUSP10Q9Y6W6 482 aa4.53□□□□□ -1.68
MIR548I3-201ENST00000408378 ITGB3P05106 788 aa4.52□□□□□ -1.69
MIR548I3-201ENST00000408378 NME2P22392 152 aa4.52□□□□□ -1.69
MIR548I3-201ENST00000408378 ZNF252P-AS1Q0IIN9 211 aa4.52□□□□□ -1.69
MIR548I3-201ENST00000408378 ORC1Q13415 861 aa4.52□□□□□ -1.69
MIR548I3-201ENST00000408378 PIWIL2Q8TC59 973 aaKnown RBP4.52□□□□□ -1.69
MIR548I3-201ENST00000408378 NAF1Q96HR8 494 aaKnown RBP4.52□□□□□ -1.69
MIR548I3-201ENST00000408378 HRKO00198 91 aa4.51□□□□□ -1.69
MIR548I3-201ENST00000408378 BUB1BO60566 1050 aaPredicted RBP4.51□□□□□ -1.69
MIR548I3-201ENST00000408378 FZD7O75084 574 aa4.51□□□□□ -1.69
MIR548I3-201ENST00000408378 LIMS1P48059 325 aa4.51□□□□□ -1.69
MIR548I3-201ENST00000408378 DUSP4Q13115 394 aa4.51□□□□□ -1.69
MIR548I3-201ENST00000408378 PRAMEF13Q5VWM6 474 aa4.51□□□□□ -1.69
MIR548I3-201ENST00000408378 TMC6Q7Z403 805 aa4.51□□□□□ -1.69
MIR548I3-201ENST00000408378 NLRX1Q86UT6 975 aa4.51□□□□□ -1.69
MIR548I3-201ENST00000408378 LDHDQ86WU2 507 aa4.51□□□□□ -1.69
MIR548I3-201ENST00000408378 Q96M66 194 aa4.51□□□□□ -1.69
MIR548I3-201ENST00000408378 PCED1AQ9H1Q7 454 aa4.51□□□□□ -1.69
MIR548I3-201ENST00000408378 GPATCH2Q9NW75 528 aa4.51□□□□□ -1.69
MIR548I3-201ENST00000408378 ING1Q9UK53 422 aaPredicted RBP4.51□□□□□ -1.69
MIR548I3-201ENST00000408378 TRAK1Q9UPV9 953 aa4.51□□□□□ -1.69
MIR548I3-201ENST00000408378 CPNE3O75131 537 aaKnown RBP4.5□□□□□ -1.69
MIR548I3-201ENST00000408378 USP2O75604 605 aaPredicted RBP4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms