RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 DHX16O60231 1041 aaKnown RBP15.06■□□□□ 0
SMARCB1-203ENST00000407082 PFKFB2O60825 505 aa15.06■□□□□ 0
SMARCB1-203ENST00000407082 PRDX5P30044 214 aa15.06■□□□□ 0
SMARCB1-203ENST00000407082 CDAN1Q8IWY9 1227 aa15.06■□□□□ 0
SMARCB1-203ENST00000407082 ZNF274Q96GC6 653 aaPredicted RBP15.06■□□□□ 0
SMARCB1-203ENST00000407082 RAI14Q9P0K7 980 aa15.06■□□□□ 0
SMARCB1-203ENST00000407082 CFAP45Q9UL16 551 aa15.06■□□□□ 0
SMARCB1-203ENST00000407082 WDR19Q8NEZ3 1342 aa15.06■□□□□ 0
SMARCB1-203ENST00000407082 SZT2Q5T011 3432 aa15.05■□□□□ 0
SMARCB1-203ENST00000407082 SYCE3A1L190 88 aa15.05■□□□□ -0
SMARCB1-203ENST00000407082 GOLGA6L4A6NEF3 574 aa15.05■□□□□ -0
SMARCB1-203ENST00000407082 H3BQV1 296 aa15.05■□□□□ -0
SMARCB1-203ENST00000407082 TLR2O60603 784 aa15.05■□□□□ -0
SMARCB1-203ENST00000407082 CETPP11597 493 aa15.05■□□□□ -0
SMARCB1-203ENST00000407082 CCDC129Q6ZRS4 1044 aa15.05■□□□□ -0
SMARCB1-203ENST00000407082 DZIP1Q86YF9 867 aaKnown RBP15.05■□□□□ -0
SMARCB1-203ENST00000407082 NECAB1Q8N987 351 aa15.05■□□□□ -0
SMARCB1-203ENST00000407082 NKX2-3Q8TAU0 364 aa15.05■□□□□ -0
SMARCB1-203ENST00000407082 RAET1EQ8TD07 263 aa15.05■□□□□ -0
SMARCB1-203ENST00000407082 SHISA4Q96DD7 197 aa15.05■□□□□ -0
SMARCB1-203ENST00000407082 LARP6Q9BRS8 491 aaKnown RBP15.05■□□□□ -0
SMARCB1-203ENST00000407082 AGXT2Q9BYV1 514 aa15.05■□□□□ -0
SMARCB1-203ENST00000407082 PIH1D3Q9NQM4 214 aaKnown RBP15.05■□□□□ -0
SMARCB1-203ENST00000407082 CNPY2Q9Y2B0 182 aa15.05■□□□□ -0
SMARCB1-203ENST00000407082 MAST3O60307 1309 aa15.05■□□□□ -0
SMARCB1-203ENST00000407082 LAMA4Q16363 1823 aa15.04■□□□□ -0
SMARCB1-203ENST00000407082 E7EWF7 191 aa15.04■□□□□ -0
SMARCB1-203ENST00000407082 IDH1O75874 414 aaKnown RBP15.04■□□□□ -0
SMARCB1-203ENST00000407082 FMNL1O95466 1100 aaPredicted RBP15.04■□□□□ -0
SMARCB1-203ENST00000407082 PSMC4P43686 418 aa15.04■□□□□ -0
SMARCB1-203ENST00000407082 PRMT2P55345 433 aa15.04■□□□□ -0
SMARCB1-203ENST00000407082 EXOSC10Q01780 885 aaKnown RBP15.04■□□□□ -0
SMARCB1-203ENST00000407082 SEC62Q99442 399 aaKnown RBP15.04■□□□□ -0
SMARCB1-203ENST00000407082 TMEM39BQ9GZU3 492 aa15.04■□□□□ -0
SMARCB1-203ENST00000407082 RNF208Q9H0X6 261 aa15.04■□□□□ -0
SMARCB1-203ENST00000407082 SERPINA10Q9UK55 444 aa15.04■□□□□ -0
SMARCB1-203ENST00000407082 BRCA2P51587 3418 aa15.04■□□□□ -0
SMARCB1-203ENST00000407082 CUL9Q8IWT3 2517 aa15.04■□□□□ -0
SMARCB1-203ENST00000407082 ESPNB1AK53 854 aa15.03■□□□□ -0
SMARCB1-203ENST00000407082 BTBD19C9JJ37 291 aa15.03■□□□□ -0
SMARCB1-203ENST00000407082 GNRH1P01148 92 aa15.03■□□□□ -0
SMARCB1-203ENST00000407082 CCL5P13501 91 aa15.03■□□□□ -0
SMARCB1-203ENST00000407082 HOXD10P28358 340 aa15.03■□□□□ -0
SMARCB1-203ENST00000407082 GRK4P32298 578 aa15.03■□□□□ -0
SMARCB1-203ENST00000407082 CLCN1P35523 988 aa15.03■□□□□ -0
SMARCB1-203ENST00000407082 TNNI2P48788 182 aa15.03■□□□□ -0
SMARCB1-203ENST00000407082 MECOMQ03112 1051 aa15.03■□□□□ -0
SMARCB1-203ENST00000407082 MAP3K12Q12852 859 aa15.03■□□□□ -0
SMARCB1-203ENST00000407082 TRDNQ13061 729 aa15.03■□□□□ -0
SMARCB1-203ENST00000407082 UBE3CQ15386 1083 aa15.03■□□□□ -0
SMARCB1-203ENST00000407082 SPDYE2Q495Y8 402 aa15.03■□□□□ -0
SMARCB1-203ENST00000407082 NAA16Q6N069 864 aaPredicted RBP15.03■□□□□ -0
SMARCB1-203ENST00000407082 TEKT1Q969V4 418 aa15.03■□□□□ -0
SMARCB1-203ENST00000407082 LRCH3Q96II8 777 aa15.03■□□□□ -0
SMARCB1-203ENST00000407082 MRIQ9BWK5 157 aa15.03■□□□□ -0
SMARCB1-203ENST00000407082 RBSNQ9H1K0 784 aa15.03■□□□□ -0
SMARCB1-203ENST00000407082 CPA4Q9UI42 421 aa15.03■□□□□ -0
SMARCB1-203ENST00000407082 ZSWIM8A7E2V4 1837 aa15.02■□□□□ -0
SMARCB1-203ENST00000407082 SOX1O00570 391 aaPredicted RBP15.02■□□□□ -0
SMARCB1-203ENST00000407082 ZNF213O14771 459 aa15.02■□□□□ -0
SMARCB1-203ENST00000407082 FIBPO43427 364 aa15.02■□□□□ -0
SMARCB1-203ENST00000407082 MCM5P33992 734 aa15.02■□□□□ -0
SMARCB1-203ENST00000407082 CRKP46108 304 aa15.02■□□□□ -0
SMARCB1-203ENST00000407082 GSTO1P78417 241 aa15.02■□□□□ -0
SMARCB1-203ENST00000407082 HDLBPQ00341 1268 aaKnown RBP15.02■□□□□ -0
SMARCB1-203ENST00000407082 DIXDC1Q155Q3 683 aa15.02■□□□□ -0
SMARCB1-203ENST00000407082 RALYLQ86SE5 291 aaKnown RBP15.02■□□□□ -0
SMARCB1-203ENST00000407082 SLF2Q8IX21 1173 aa15.02■□□□□ -0
SMARCB1-203ENST00000407082 NCOA7Q8NI08 942 aa15.02■□□□□ -0
SMARCB1-203ENST00000407082 SMARCC2Q8TAQ2 1214 aa15.02■□□□□ -0
SMARCB1-203ENST00000407082 BRF1Q92994 677 aa15.02■□□□□ -0
SMARCB1-203ENST00000407082 NSUN4Q96CB9 384 aaKnown RBP15.02■□□□□ -0
SMARCB1-203ENST00000407082 TEPSINQ96N21 525 aa15.02■□□□□ -0
SMARCB1-203ENST00000407082 RTN4Q9NQC3 1192 aaKnown RBP15.02■□□□□ -0
SMARCB1-203ENST00000407082 ECM29Q5VYK3 1845 aa15.01□□□□□ -0.01
SMARCB1-203ENST00000407082 LAMB1P07942 1786 aa15.01□□□□□ -0.01
SMARCB1-203ENST00000407082 EVI5O60447 810 aa15.01□□□□□ -0.01
SMARCB1-203ENST00000407082 IGSF3O75054 1194 aa15.01□□□□□ -0.01
SMARCB1-203ENST00000407082 GADD45BO75293 160 aaPredicted RBP15.01□□□□□ -0.01
SMARCB1-203ENST00000407082 GJB1P08034 283 aa15.01□□□□□ -0.01
SMARCB1-203ENST00000407082 MSNP26038 577 aaKnown RBP15.01□□□□□ -0.01
SMARCB1-203ENST00000407082 GJA8P48165 433 aa15.01□□□□□ -0.01
SMARCB1-203ENST00000407082 DNM1Q05193 864 aaKnown RBP15.01□□□□□ -0.01
SMARCB1-203ENST00000407082 SNAPC2Q13487 334 aa15.01□□□□□ -0.01
SMARCB1-203ENST00000407082 FOXD4L6Q3SYB3 417 aaPredicted RBP15.01□□□□□ -0.01
SMARCB1-203ENST00000407082 SLC9C2Q5TAH2 1124 aa15.01□□□□□ -0.01
SMARCB1-203ENST00000407082 HHIPL2Q6UWX4 724 aa15.01□□□□□ -0.01
SMARCB1-203ENST00000407082 FOXD4L3Q6VB84 417 aaPredicted RBP15.01□□□□□ -0.01
SMARCB1-203ENST00000407082 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.01□□□□□ -0.01
SMARCB1-203ENST00000407082 ZKSCAN4Q969J2 545 aaPredicted RBP15.01□□□□□ -0.01
SMARCB1-203ENST00000407082 TRIM47Q96LD4 638 aa15.01□□□□□ -0.01
SMARCB1-203ENST00000407082 ZNF396Q96N95 335 aaPredicted RBP15.01□□□□□ -0.01
SMARCB1-203ENST00000407082 CCDC39Q9UFE4 941 aa15.01□□□□□ -0.01
SMARCB1-203ENST00000407082 SRRDQ9UH36 339 aa15.01□□□□□ -0.01
SMARCB1-203ENST00000407082 OTOFQ9HC10 1997 aa15□□□□□ -0.01
SMARCB1-203ENST00000407082 SPDYE5A6NIY4 337 aa15□□□□□ -0.01
SMARCB1-203ENST00000407082 IRF6O14896 467 aa15□□□□□ -0.01
SMARCB1-203ENST00000407082 FARP2O94887 1054 aaPredicted RBP15□□□□□ -0.01
SMARCB1-203ENST00000407082 LDHCP07864 332 aa15□□□□□ -0.01
SMARCB1-203ENST00000407082 OSBPP22059 807 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms