RNA–Protein interactions for RNA: ENST00000406875.7

HIPK2-202, Transcript of homeodomain interacting protein kinase 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HIPK2, Length 15,049 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK2-202ENST00000406875 CKAP2LQ8IYA6 745 aa7.29□□□□□ -1.24
HIPK2-202ENST00000406875 FNBP1Q96RU3 617 aa7.29□□□□□ -1.24
HIPK2-202ENST00000406875 SCAF8Q9UPN6 1271 aaKnown RBP7.29□□□□□ -1.24
HIPK2-202ENST00000406875 HNRNPH2P55795 449 aaKnown RBP7.29□□□□□ -1.24
HIPK2-202ENST00000406875 CFAP36Q96G28 342 aa7.29□□□□□ -1.24
HIPK2-202ENST00000406875 SEL1LQ9UBV2 794 aa7.29□□□□□ -1.24
HIPK2-202ENST00000406875 RCN1Q15293 331 aa7.29□□□□□ -1.24
HIPK2-202ENST00000406875 MCMDC2Q4G0Z9 681 aa7.29□□□□□ -1.24
HIPK2-202ENST00000406875 KRT26Q7Z3Y9 468 aa7.29□□□□□ -1.24
HIPK2-202ENST00000406875 BPIFB4P59827 614 aa7.29□□□□□ -1.24
HIPK2-202ENST00000406875 HNRNPCL2B2RXH8 293 aa7.29□□□□□ -1.24
HIPK2-202ENST00000406875 LSM1O15116 133 aaKnown RBP7.29□□□□□ -1.24
HIPK2-202ENST00000406875 HNRNPCL1O60812 293 aaKnown RBP7.29□□□□□ -1.24
HIPK2-202ENST00000406875 GIGYF1O75420 1035 aaPredicted RBP7.29□□□□□ -1.24
HIPK2-202ENST00000406875 TOP1P11387 765 aaKnown RBP7.29□□□□□ -1.24
HIPK2-202ENST00000406875 CCNCP24863 283 aa7.29□□□□□ -1.24
HIPK2-202ENST00000406875 CASP2P42575 452 aa7.29□□□□□ -1.24
HIPK2-202ENST00000406875 SURF1Q15526 300 aa7.29□□□□□ -1.24
HIPK2-202ENST00000406875 DDX41Q9UJV9 622 aaKnown RBP7.29□□□□□ -1.24
HIPK2-202ENST00000406875 SAMM50Q9Y512 469 aa7.29□□□□□ -1.24
HIPK2-202ENST00000406875 SEMA3EO15041 775 aa7.29□□□□□ -1.24
HIPK2-202ENST00000406875 ILF2Q12905 390 aaKnown RBP7.29□□□□□ -1.24
HIPK2-202ENST00000406875 MIER3Q7Z3K6 550 aa7.29□□□□□ -1.24
HIPK2-202ENST00000406875 LNPKQ9C0E8 428 aa7.29□□□□□ -1.24
HIPK2-202ENST00000406875 FAAH2Q6GMR7 532 aa7.29□□□□□ -1.24
HIPK2-202ENST00000406875 IQUBQ8NA54 791 aa7.29□□□□□ -1.24
HIPK2-202ENST00000406875 SIL1Q9H173 461 aa7.29□□□□□ -1.24
HIPK2-202ENST00000406875 HELLSQ9NRZ9 838 aa7.29□□□□□ -1.24
HIPK2-202ENST00000406875 CLTAP09496 248 aa7.28□□□□□ -1.24
HIPK2-202ENST00000406875 GNL1P36915 607 aaPredicted RBP7.28□□□□□ -1.24
HIPK2-202ENST00000406875 DHX9Q08211 1270 aaKnown RBP7.28□□□□□ -1.24
HIPK2-202ENST00000406875 NUDT18Q6ZVK8 323 aa7.28□□□□□ -1.24
HIPK2-202ENST00000406875 LINS1Q8NG48 757 aa7.28□□□□□ -1.24
HIPK2-202ENST00000406875 JAKMIP1Q96N16 626 aaKnown RBP7.28□□□□□ -1.24
HIPK2-202ENST00000406875 C1orf131Q8NDD1 294 aaKnown RBP7.28□□□□□ -1.24
HIPK2-202ENST00000406875 RABL2BQ9UNT1 228 aa7.28□□□□□ -1.24
HIPK2-202ENST00000406875 GUCY1B2O75343 617 aa7.28□□□□□ -1.24
HIPK2-202ENST00000406875 HARSP12081 509 aaKnown RBP7.28□□□□□ -1.24
HIPK2-202ENST00000406875 SYCE1Q8N0S2 351 aa7.28□□□□□ -1.24
HIPK2-202ENST00000406875 CNKSR1Q969H4 720 aa7.28□□□□□ -1.24
HIPK2-202ENST00000406875 FAM129AQ9BZQ8 928 aa7.28□□□□□ -1.24
HIPK2-202ENST00000406875 CCDC68Q9H2F9 335 aa7.28□□□□□ -1.24
HIPK2-202ENST00000406875 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.28□□□□□ -1.24
HIPK2-202ENST00000406875 CAMSAP2Q08AD1 1489 aa7.28□□□□□ -1.24
HIPK2-202ENST00000406875 GOLGA8AA7E2F4 631 aa7.28□□□□□ -1.24
HIPK2-202ENST00000406875 GOLGA8BA8MQT2 603 aa7.28□□□□□ -1.24
HIPK2-202ENST00000406875 BCRP11274 1271 aa7.28□□□□□ -1.24
HIPK2-202ENST00000406875 IRX4P78413 519 aa7.28□□□□□ -1.24
HIPK2-202ENST00000406875 RAD51AP2Q09MP3 1159 aa7.28□□□□□ -1.24
HIPK2-202ENST00000406875 SPATA21Q7Z572 469 aa7.28□□□□□ -1.24
HIPK2-202ENST00000406875 TNRQ92752 1358 aa7.28□□□□□ -1.24
HIPK2-202ENST00000406875 TULP2O00295 520 aa7.28□□□□□ -1.24
HIPK2-202ENST00000406875 RANBP1P43487 201 aa7.28□□□□□ -1.24
HIPK2-202ENST00000406875 MFN1Q8IWA4 741 aa7.28□□□□□ -1.24
HIPK2-202ENST00000406875 ATP2A3Q93084 1043 aa7.28□□□□□ -1.24
HIPK2-202ENST00000406875 PRKAG2Q9UGJ0 569 aa7.28□□□□□ -1.24
HIPK2-202ENST00000406875 KCNA6P17658 529 aa7.28□□□□□ -1.24
HIPK2-202ENST00000406875 ARFGAP2Q8N6H7 521 aa7.28□□□□□ -1.24
HIPK2-202ENST00000406875 CCPG1Q9ULG6 757 aa7.28□□□□□ -1.24
HIPK2-202ENST00000406875 USH1GQ495M9 461 aa7.28□□□□□ -1.24
HIPK2-202ENST00000406875 BZW1Q7L1Q6 419 aaKnown RBP7.28□□□□□ -1.24
HIPK2-202ENST00000406875 SLC12A5Q9H2X9 1139 aa7.28□□□□□ -1.24
HIPK2-202ENST00000406875 PCDH11XQ9BZA7 1347 aa7.28□□□□□ -1.24
HIPK2-202ENST00000406875 PCDH11YQ9BZA8 1340 aa7.28□□□□□ -1.24
HIPK2-202ENST00000406875 STAM2O75886 525 aa7.28□□□□□ -1.24
HIPK2-202ENST00000406875 ATP2B4P23634 1241 aa7.28□□□□□ -1.24
HIPK2-202ENST00000406875 USP14P54578 494 aa7.28□□□□□ -1.24
HIPK2-202ENST00000406875 FBXO18Q8NFZ0 1043 aa7.28□□□□□ -1.24
HIPK2-202ENST00000406875 AZI2Q9H6S1 392 aa7.28□□□□□ -1.24
HIPK2-202ENST00000406875 ERICH3Q5RHP9 1530 aa7.28□□□□□ -1.24
HIPK2-202ENST00000406875 PECAM1P16284 738 aaPredicted RBP7.28□□□□□ -1.24
HIPK2-202ENST00000406875 OSBPP22059 807 aa7.28□□□□□ -1.24
HIPK2-202ENST00000406875 SNCBQ16143 134 aa7.28□□□□□ -1.24
HIPK2-202ENST00000406875 NOD1Q9Y239 953 aa7.28□□□□□ -1.24
HIPK2-202ENST00000406875 SSBP05455 408 aaKnown RBP eCLIP7.28□□□□□ -1.24
HIPK2-202ENST00000406875 RPS6KA3P51812 740 aa7.28□□□□□ -1.24
HIPK2-202ENST00000406875 PPFIA1Q13136 1202 aa7.28□□□□□ -1.24
HIPK2-202ENST00000406875 CYP26C1Q6V0L0 522 aa7.28□□□□□ -1.24
HIPK2-202ENST00000406875 HOXA2O43364 376 aa7.28□□□□□ -1.24
HIPK2-202ENST00000406875 PRR29P0C7W0 189 aa7.28□□□□□ -1.24
HIPK2-202ENST00000406875 CCDC84Q86UT8 332 aaPredicted RBP7.28□□□□□ -1.24
HIPK2-202ENST00000406875 ARL10Q8N8L6 244 aa7.28□□□□□ -1.24
HIPK2-202ENST00000406875 SPECC1Q5M775 1068 aa7.27□□□□□ -1.24
HIPK2-202ENST00000406875 NLRX1Q86UT6 975 aa7.27□□□□□ -1.24
HIPK2-202ENST00000406875 GTF3C2Q8WUA4 911 aaPredicted RBP7.27□□□□□ -1.24
HIPK2-202ENST00000406875 EPB41P11171 864 aaKnown RBP7.27□□□□□ -1.24
HIPK2-202ENST00000406875 MTRF1LQ9UGC7 380 aaKnown RBP7.27□□□□□ -1.24
HIPK2-202ENST00000406875 Q4G0T1 1027 aa7.27□□□□□ -1.25
HIPK2-202ENST00000406875 RBM12BQ8IXT5 1001 aaKnown RBP7.27□□□□□ -1.25
HIPK2-202ENST00000406875 PPP2R3CQ969Q6 453 aa7.27□□□□□ -1.25
HIPK2-202ENST00000406875 GRM8O00222 908 aa7.27□□□□□ -1.25
HIPK2-202ENST00000406875 EXOSC9Q06265 439 aaKnown RBP7.27□□□□□ -1.25
HIPK2-202ENST00000406875 NT5C3AQ9H0P0 336 aa7.27□□□□□ -1.25
HIPK2-202ENST00000406875 WDR37Q9Y2I8 494 aa7.27□□□□□ -1.25
HIPK2-202ENST00000406875 FLOT1O75955 427 aa7.27□□□□□ -1.25
HIPK2-202ENST00000406875 TADA2BQ86TJ2 420 aa7.27□□□□□ -1.25
HIPK2-202ENST00000406875 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.27□□□□□ -1.25
HIPK2-202ENST00000406875 ITM2BQ9Y287 266 aa7.27□□□□□ -1.25
HIPK2-202ENST00000406875 ATP11BQ9Y2G3 1177 aa7.27□□□□□ -1.25
HIPK2-202ENST00000406875 KIRREL3Q8IZU9 778 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms