RNA–Protein interactions for RNA: ENST00000406503.1

PRAME-206, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRAME, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-206ENST00000406503 C7orf61Q8IZ16 206 aa15.73■□□□□ 0.11
PRAME-206ENST00000406503 SOCS4Q8WXH5 440 aa15.73■□□□□ 0.11
PRAME-206ENST00000406503 RIOK1Q9BRS2 568 aaKnown RBP15.73■□□□□ 0.11
PRAME-206ENST00000406503 EHD4Q9H223 541 aa15.73■□□□□ 0.11
PRAME-206ENST00000406503 ZMYND8Q9ULU4 1186 aaPredicted RBP15.73■□□□□ 0.11
PRAME-206ENST00000406503 EXOC6BQ9Y2D4 811 aa15.73■□□□□ 0.11
PRAME-206ENST00000406503 GREB1LQ9C091 1923 aaPredicted RBP15.72■□□□□ 0.11
PRAME-206ENST00000406503 COL6A1P12109 1028 aa15.72■□□□□ 0.11
PRAME-206ENST00000406503 CCND3P30281 292 aaPredicted RBP15.72■□□□□ 0.11
PRAME-206ENST00000406503 SHMT1P34896 483 aa15.72■□□□□ 0.11
PRAME-206ENST00000406503 ZYXQ15942 572 aaKnown RBP15.72■□□□□ 0.11
PRAME-206ENST00000406503 LHX8Q68G74 356 aa15.72■□□□□ 0.11
PRAME-206ENST00000406503 FTSJ3Q8IY81 847 aaKnown RBP15.72■□□□□ 0.11
PRAME-206ENST00000406503 ACER1Q8TDN7 264 aa15.72■□□□□ 0.11
PRAME-206ENST00000406503 PAGR1Q9BTK6 254 aa15.72■□□□□ 0.11
PRAME-206ENST00000406503 TRIM34Q9BYJ4 488 aa15.72■□□□□ 0.11
PRAME-206ENST00000406503 NBPF3Q9H094 633 aa15.72■□□□□ 0.11
PRAME-206ENST00000406503 SERPINB13Q9UIV8 391 aa15.72■□□□□ 0.11
PRAME-206ENST00000406503 VCANP13611 3396 aa15.71■□□□□ 0.11
PRAME-206ENST00000406503 MAPK4P31152 587 aa15.71■□□□□ 0.11
PRAME-206ENST00000406503 USP5P45974 858 aa15.71■□□□□ 0.11
PRAME-206ENST00000406503 GABPAQ06546 454 aa15.71■□□□□ 0.11
PRAME-206ENST00000406503 C11orf49Q9H6J7 331 aa15.71■□□□□ 0.11
PRAME-206ENST00000406503 FLRT1Q9NZU1 646 aa15.71■□□□□ 0.11
PRAME-206ENST00000406503 SYN1P17600 705 aa15.7■□□□□ 0.1
PRAME-206ENST00000406503 VCAM1P19320 739 aa15.7■□□□□ 0.1
PRAME-206ENST00000406503 BMP8BP34820 402 aa15.7■□□□□ 0.1
PRAME-206ENST00000406503 HNRNPUQ00839 825 aaKnown RBP eCLIP15.7■□□□□ 0.1
PRAME-206ENST00000406503 CATSPERGQ6ZRH7 1159 aa15.7■□□□□ 0.1
PRAME-206ENST00000406503 PLEKHH3Q7Z736 793 aa15.7■□□□□ 0.1
PRAME-206ENST00000406503 AACSQ86V21 672 aa15.7■□□□□ 0.1
PRAME-206ENST00000406503 PANK1Q8TE04 598 aa15.7■□□□□ 0.1
PRAME-206ENST00000406503 KIAA1683Q9H0B3 1180 aa15.7■□□□□ 0.1
PRAME-206ENST00000406503 BTBD7Q9P203 1132 aa15.7■□□□□ 0.1
PRAME-206ENST00000406503 PRUNE2Q8WUY3 3088 aa15.7■□□□□ 0.1
PRAME-206ENST00000406503 IGHA2P01877 340 aa15.69■□□□□ 0.1
PRAME-206ENST00000406503 ZKSCAN1P17029 563 aaPredicted RBP15.69■□□□□ 0.1
PRAME-206ENST00000406503 RGS2P41220 211 aa15.69■□□□□ 0.1
PRAME-206ENST00000406503 CERKLQ49MI3 558 aaPredicted RBP15.69■□□□□ 0.1
PRAME-206ENST00000406503 LBX2Q6XYB7 198 aa15.69■□□□□ 0.1
PRAME-206ENST00000406503 GTF3C2Q8WUA4 911 aaPredicted RBP15.69■□□□□ 0.1
PRAME-206ENST00000406503 APBA2Q99767 749 aa15.69■□□□□ 0.1
PRAME-206ENST00000406503 IL1RAPL2Q9NP60 686 aa15.69■□□□□ 0.1
PRAME-206ENST00000406503 RABGAP1Q9Y3P9 1069 aa15.69■□□□□ 0.1
PRAME-206ENST00000406503 A0A1W2PRG0 241 aa15.68■□□□□ 0.1
PRAME-206ENST00000406503 TCRBV5S4A2TA0A5A2 114 aa15.68■□□□□ 0.1
PRAME-206ENST00000406503 SPDYE16A6NNV3 312 aaPredicted RBP15.68■□□□□ 0.1
PRAME-206ENST00000406503 USP17L15C9J2P7 530 aa15.68■□□□□ 0.1
PRAME-206ENST00000406503 USP17L13C9JLJ4 530 aa15.68■□□□□ 0.1
PRAME-206ENST00000406503 USP17L11C9JVI0 530 aa15.68■□□□□ 0.1
PRAME-206ENST00000406503 USP17L18D6R9N7 530 aa15.68■□□□□ 0.1
PRAME-206ENST00000406503 USP17L22D6RA61 530 aa15.68■□□□□ 0.1
PRAME-206ENST00000406503 USP17L17D6RBQ6 530 aa15.68■□□□□ 0.1
PRAME-206ENST00000406503 USP17L19D6RCP7 530 aa15.68■□□□□ 0.1
PRAME-206ENST00000406503 USP17L20D6RJB6 530 aa15.68■□□□□ 0.1
PRAME-206ENST00000406503 MAGEA10P43363 369 aaPredicted RBP15.68■□□□□ 0.1
PRAME-206ENST00000406503 USP17L24Q0WX57 530 aa15.68■□□□□ 0.1
PRAME-206ENST00000406503 MAP3K12Q12852 859 aa15.68■□□□□ 0.1
PRAME-206ENST00000406503 MAP2K5Q13163 448 aa15.68■□□□□ 0.1
PRAME-206ENST00000406503 PDE3AQ14432 1141 aa15.68■□□□□ 0.1
PRAME-206ENST00000406503 RAB3GAP1Q15042 981 aa15.68■□□□□ 0.1
PRAME-206ENST00000406503 ABCB5Q2M3G0 1257 aa15.68■□□□□ 0.1
PRAME-206ENST00000406503 CERS3Q8IU89 383 aa15.68■□□□□ 0.1
PRAME-206ENST00000406503 FEZ1Q99689 392 aa15.68■□□□□ 0.1
PRAME-206ENST00000406503 MYH4Q9Y623 1939 aa15.68■□□□□ 0.1
PRAME-206ENST00000406503 PDE6AP16499 860 aa15.67■□□□□ 0.1
PRAME-206ENST00000406503 PTPREP23469 700 aa15.67■□□□□ 0.1
PRAME-206ENST00000406503 LRRC26Q2I0M4 334 aa15.67■□□□□ 0.1
PRAME-206ENST00000406503 KIAA1755Q5JYT7 1200 aa15.67■□□□□ 0.1
PRAME-206ENST00000406503 TTC6Q86TZ1 520 aa15.67■□□□□ 0.1
PRAME-206ENST00000406503 SIRT2Q8IXJ6 389 aa15.67■□□□□ 0.1
PRAME-206ENST00000406503 TRMT44Q8IYL2 757 aaKnown RBP15.67■□□□□ 0.1
PRAME-206ENST00000406503 NPLOC4Q8TAT6 608 aa15.67■□□□□ 0.1
PRAME-206ENST00000406503 RHPN1Q8TCX5 695 aa15.67■□□□□ 0.1
PRAME-206ENST00000406503 USP14P54578 494 aa15.66■□□□□ 0.1
PRAME-206ENST00000406503 GRB14Q14449 540 aa15.66■□□□□ 0.1
PRAME-206ENST00000406503 SEPT2Q15019 361 aa15.66■□□□□ 0.1
PRAME-206ENST00000406503 SLFNL1Q499Z3 407 aa15.66■□□□□ 0.1
PRAME-206ENST00000406503 TMED8Q6PL24 325 aaPredicted RBP15.66■□□□□ 0.1
PRAME-206ENST00000406503 ERC1Q8IUD2 1116 aa15.66■□□□□ 0.1
PRAME-206ENST00000406503 SDR42E1Q8WUS8 393 aa15.66■□□□□ 0.1
PRAME-206ENST00000406503 EDC3Q96F86 508 aaKnown RBP15.66■□□□□ 0.1
PRAME-206ENST00000406503 RPAP3Q9H6T3 665 aaPredicted RBP15.66■□□□□ 0.1
PRAME-206ENST00000406503 CUL9Q8IWT3 2517 aa15.66■□□□□ 0.1
PRAME-206ENST00000406503 ZNF532Q9HCE3 1301 aa15.66■□□□□ 0.1
PRAME-206ENST00000406503 MAGEB6P1A0A0J9YX57 407 aa15.65■□□□□ 0.1
PRAME-206ENST00000406503 SMIM22K7EJ46 135 aa15.65■□□□□ 0.1
PRAME-206ENST00000406503 CHGBP05060 677 aa15.65■□□□□ 0.1
PRAME-206ENST00000406503 HOXC6P09630 235 aa15.65■□□□□ 0.1
PRAME-206ENST00000406503 CYP2D6P10635 497 aa15.65■□□□□ 0.1
PRAME-206ENST00000406503 MIER1Q8N108 512 aa15.65■□□□□ 0.1
PRAME-206ENST00000406503 LCORLQ8N3X6 602 aa15.65■□□□□ 0.1
PRAME-206ENST00000406503 SLC44A5Q8NCS7 719 aa15.65■□□□□ 0.1
PRAME-206ENST00000406503 TRPV1Q8NER1 839 aa15.65■□□□□ 0.1
PRAME-206ENST00000406503 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.65■□□□□ 0.1
PRAME-206ENST00000406503 DCP1AQ9NPI6 582 aaPredicted RBP15.65■□□□□ 0.1
PRAME-206ENST00000406503 MCM3APO60318 1980 aa15.65■□□□□ 0.1
PRAME-206ENST00000406503 SLC15A5A6NIM6 579 aa15.64■□□□□ 0.09
PRAME-206ENST00000406503 LRIT3Q3SXY7 679 aa15.64■□□□□ 0.09
PRAME-206ENST00000406503 SLC9C2Q5TAH2 1124 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms